| (10) CELL-LINE | (5) OTHER | (1) TESTES |
| AAATCAGGTAATTTTAAATGTGCCAGTTCTATAAAATGAGACCGAAATTTTGAAAATGAAAATATTCATTTAATACAAATAATTTATCTTATTTTATTTATTTTTCTCTGTTGTTACCTTGAGAAAACATAGGTAGTGTTCATTAACTGCAGTCTAGATGTACTTTCATTTTCTTGTTCTAACTATACTGTATATTGCAGATATTTTAGTACAACATCTTTTCATCACAGAAATGATATCTTCAGGGAAA .............................................................................................(((((((((((((((.((....))...))))))).))))))))............(((((.(((....((............)).....))).)))))........................................................... ......................................................................................87......................................................................................................191......................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR343335 | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR343334 | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | SRR343336 | SRR189782 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR553576(SRX182782) source: Testis. (testes) | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR343337 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................TTTTATTTATTTTTCTCACAG.......................................................................................................................................... | 21 | 34.00 | 0.00 | 18.00 | 16.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................AATATTCATTTAATACAAATAATTTA.................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................TTTTATTTATTTTTCTCACAT.......................................................................................................................................... | 21 | 2.00 | 0.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | |
| ...................................................................................TTATCTTATTTTATTTATATG.................................................................................................................................................. | 21 | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................TGCAGATATTTTAGTTGGA.................................... | 19 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | |
| ..........................................................AAAATATTCATTTAATACAAATAATTTA.................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................TTTCATCACAGAAATGATATCTTTAGG.... | 27 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| .................................................................................ATTTATCTTATTTTATTTATTAG.................................................................................................................................................. | 23 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................ATCTTATTTTATTTATTTACG................................................................................................................................................ | 21 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................TTATTTATTTTTCTCTGTTGTTACCTC.................................................................................................................................. | 27 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ............................................................................................TTTATTTATTTTTCTCTGCAGA........................................................................................................................................ | 22 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................TTTTATTTATTTTTCTCAAG........................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................ATTTATCTTATTTTATTTATTTTATT............................................................................................................................................... | 26 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................TTTTATTTATTTTTCTCGCAG.......................................................................................................................................... | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................TATCTTATTTTATTTATTTTTTATA............................................................................................................................................. | 25 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ..................................................................................TTTATCTTATTTTATTTATTTTTCCC.............................................................................................................................................. | 26 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................CTTATTTTATTTATTTTTTATG............................................................................................................................................. | 22 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................AAATATTCATTTAATACAAATAATTTA.................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................ATCTTATTTTATTTATTAATG................................................................................................................................................ | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................AATTTATCTTATTTTATTTGAG.................................................................................................................................................... | 22 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................ATTTATCTTATTTTATTTATTTTTTATT............................................................................................................................................. | 28 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................TTATCTTATTTTATTTATTTTAG................................................................................................................................................ | 23 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................TGCAGATATTTTAGTTGTA.................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ......................................................................................TCTTATTTTATTTATTTTTGG............................................................................................................................................... | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................ATCTTATTTTATTTATTTAAAG............................................................................................................................................... | 22 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................TATTTTATTTATTTTTCCAAG............................................................................................................................................ | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................ATTTTCTTGTTCTAACCATG............................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| ...................................................................................TTATCTTATTTTATTTATTTTTTCAG............................................................................................................................................. | 26 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................CTTATTTTATTTATTTTTC................................................................................................................................................ | 19 | 5 | 0.40 | 0.40 | - | - | 0.20 | - | 0.20 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................TTAATACAAATAATTTA.................................................................................................................................................................... | 17 | 7 | 0.14 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AAATCAGGTAATTTTAAATGTGCCAGTTCTATAAAATGAGACCGAAATTTTGAAAATGAAAATATTCATTTAATACAAATAATTTATCTTATTTTATTTATTTTTCTCTGTTGTTACCTTGAGAAAACATAGGTAGTGTTCATTAACTGCAGTCTAGATGTACTTTCATTTTCTTGTTCTAACTATACTGTATATTGCAGATATTTTAGTACAACATCTTTTCATCACAGAAATGATATCTTCAGGGAAA .............................................................................................(((((((((((((((.((....))...))))))).))))))))............(((((.(((....((............)).....))).)))))........................................................... ......................................................................................87......................................................................................................191......................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR343335 | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR343334 | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | SRR343336 | SRR189782 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR553576(SRX182782) source: Testis. (testes) | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR343337 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................................................................TATTGCAGATATTTTCCT........................................ | 18 | 4.00 | 0.00 | - | - | - | - | - | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................................TATTGCAGATATTTTCCTG....................................... | 19 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | |
| ................................................................................................................................................................................................TATTGCAGATATTTTCC......................................... | 17 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ...........................................GAAATTTTGAAAATGAATAC........................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................AGTTCTATAAAATGAGCTG............................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |