ID: uc003irp.2_intron_16_0_chr4_169188843_r
GENE: (21)
chr4:169188793-169189041-


(10)
BREAST 		(5)
CELL-LINE 		(2)
CERVIX 		(5)
HEART 		(2)
LIVER 		(1)
OTHER 		(23)
SKIN

Sense strand
CTTTCCCAAAGACTACTTGCAAGTAAAACAATCGTATAAAGTTAGACTTGGTATGTTTGATATATTTATATAAAGCTTGCCTTTTATTTTATTATTTTTAAAAAATCTGCCATTGCCTTGATCTTGATGCCGTTTACTTTAAATTTGTTTCAGTGATTACATTTCCATTGATGTGGAAATTCTTGTTCTTCATTTTTAGTGCTCTATGGAGAGAGGTATAATGATCTAGAGAAGCATGTATGTTCAATA
..................................................(((.((((.((((....)))).)))).))).........................................................................................................................................................................
..................................................51....................................................105..............................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189784SRR189783SRR037937(GSM510475)
293cand2. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577738(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR191480(GSM715590)
38genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191500(GSM715610)
7genomic small RNA (size selected RNA from to. (breast)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040024(GSM532909)
G613N. (cervix)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
................................................TGGTATGTTTGATATATTAG.....................................................................................................................................................................................20166.002.0054.005.006.00----------------------------------1.00--------------
................................................TGGTATGTTTGATATTAG.......................................................................................................................................................................................1831.000.0026.003.002.00-------------------------------------------------
....CCCAAAGACTACTTGCAAGTAAAA.............................................................................................................................................................................................................................24122.0022.00----3.003.00--1.00---2.00--2.00---1.00-1.00--1.001.00------1.001.00------1.00---1.001.00-1.001.00---
................................................TGGTATGTTTGATATACTAG.....................................................................................................................................................................................209.000.001.007.00------------------------------------1.00-------------
................................................TGGTATGTTTGATATATTAGG....................................................................................................................................................................................2117.002.00---1.00----1.001.00-------1.00---------1.001.00-------1.00---------------
................................................TGGTATGTTTGATATATTAT.....................................................................................................................................................................................2017.002.005.001.001.00-------------------------------------------------
.......AAAGACTACTTGCAAGTAAAA.............................................................................................................................................................................................................................2116.006.00-------3.00-----1.00-----------------1.00---------1.00----------
................................................TGGTATGTTTGATATATTAGGT...................................................................................................................................................................................2215.002.00---------2.00--------1.00----------1.00-----1.00----------------
.....CCAAAGACTACTTGCAAGTAAAA.............................................................................................................................................................................................................................2313.003.00----1.001.00--1.00-------------------------------------------
...............................................................................CCTTTTATTTTATTATTTTTTG....................................................................................................................................................223.000.00------1.00----2.00----------------------------------------
...................................................TATGTTTGATATATTATG....................................................................................................................................................................................183.000.00---3.00------------------------------------------------
................................................TGGTATGTTTGATATAGTAG.....................................................................................................................................................................................202.000.001.001.00--------------------------------------------------
..TTCCCAAAGACTACTTGCAAGTAAAACAA..........................................................................................................................................................................................................................2912.002.00----------2.00-----------------------------------------
................................................TGGTATGTTTGATATATTA......................................................................................................................................................................................1912.002.002.00---------------------------------------------------
................................................TGGTATGTTTGATATATT.......................................................................................................................................................................................1812.002.002.00---------------------------------------------------
......CAAAGACTACTTGCAAGTAAAA.............................................................................................................................................................................................................................2212.002.00-----------------1.00--1.00-------------------------------
................................................TGGTATGTTTGATATATTGG.....................................................................................................................................................................................2012.002.002.00---------------------------------------------------
...............................................................................CCTTTTATTTTATTATTTTATG....................................................................................................................................................222.000.00------2.00---------------------------------------------
.........AGACTACTTGCAAGTAAAACAA..........................................................................................................................................................................................................................2211.001.00----------1.00-----------------------------------------
.......................................................................................................................................................................................................................GTATAATGATCTAGAGAAGCATG...........2311.001.00----------------1.00-----------------------------------
...........................................................................................................................................................................................................................AATGATCTAGAGAAGCATGTATGTTCA...2711.001.00-----------------------1.00----------------------------
...........................................................................................................................................................................TGTGGAAATTCTTGTTG.............................................................171.000.001.00---------------------------------------------------
................................................TGGTATGTTTGATATATTAGGA...................................................................................................................................................................................2211.002.00---------------------------------------1.00------------
................................................TGGTATGTTTGATATATTTGGTT..................................................................................................................................................................................231.000.00--------------------------1.00-------------------------
.........AGACTACTTGCAAGTAAAA.............................................................................................................................................................................................................................1911.001.00------------------------------1.00---------------------
...............................................TTGGTATGTTTGATATATTAG.....................................................................................................................................................................................211.000.001.00---------------------------------------------------
................................................TGGTATGTTTGATATTAT.......................................................................................................................................................................................181.000.001.00---------------------------------------------------
................................................TGGTATGTTTGATATATTTG.....................................................................................................................................................................................201.000.001.00---------------------------------------------------
................................................TGGTATGTTTGATATTTG.......................................................................................................................................................................................181.000.001.00---------------------------------------------------
................................................TGGTATGTTTGATATTAA.......................................................................................................................................................................................181.000.001.00---------------------------------------------------
.................................................................................TTTTATTTTATTATTCTAG.....................................................................................................................................................191.000.00-----------1.00----------------------------------------
..................................................................................................TAAAAAATCTGCCATTGCCT...................................................................................................................................2011.001.00-------------1.00--------------------------------------
.................................................................................................................................................................................................................................CTAGAGAAGCATGTATGTT.....1911.001.00----------------1.00-----------------------------------
................................................TGGTATGTTTGATATTAC.......................................................................................................................................................................................181.000.001.00---------------------------------------------------
..........................................................................................................................................................................................................TCTATGGAGAGAGGTATAATGATCTAGA...................2811.001.00----------------------1.00-----------------------------
......................................AAGTTAGACTTGGTATGTTTGATA...........................................................................................................................................................................................2411.001.00-------------------------------------------------1.00--
................................................TGGTATGTTTGATATATTATG....................................................................................................................................................................................2111.002.00----------------------------------------------1.00-----
................................................TGGTATGTTTGATATACTG......................................................................................................................................................................................191.000.00-1.00--------------------------------------------------
.................................................GGTATGTTTGATATACGAG.....................................................................................................................................................................................191.000.00-1.00--------------------------------------------------
.............................................................................................................................................................................................................................TGATCTAGAGAAGCATG...........1711.001.00------------------1.00---------------------------------
..................................TATAAAGTTAGACTTGTGCT...................................................................................................................................................................................................201.000.00-------------------------------------------1.00--------
..............................................................................................................................ATGCCGTTTACTTTACG..........................................................................................................171.000.00----------------------------------1.00-----------------
................................................................................................TTTAAAAAATCTGCCATTACCT...................................................................................................................................221.000.00--------------------------------------------------1.00-
................................................TGGTATGTTTGATATATCAG.....................................................................................................................................................................................2030.670.330.67---------------------------------------------------
................................................TGGTATGTTTGATATATCTG.....................................................................................................................................................................................2030.330.330.33---------------------------------------------------
................................................TGGTATGTTTGATATAT........................................................................................................................................................................................1730.330.330.33---------------------------------------------------
................................................TGGTATGTTTGATATATGAG.....................................................................................................................................................................................2030.330.330.33---------------------------------------------------
...........ACTACTTGCAAGTAAAA.............................................................................................................................................................................................................................1730.330.33---------------------------------------------------0.33
................................................TGGTATGTTTGATATATCG......................................................................................................................................................................................1930.330.33-0.33--------------------------------------------------

Antisense strand
CTTTCCCAAAGACTACTTGCAAGTAAAACAATCGTATAAAGTTAGACTTGGTATGTTTGATATATTTATATAAAGCTTGCCTTTTATTTTATTATTTTTAAAAAATCTGCCATTGCCTTGATCTTGATGCCGTTTACTTTAAATTTGTTTCAGTGATTACATTTCCATTGATGTGGAAATTCTTGTTCTTCATTTTTAGTGCTCTATGGAGAGAGGTATAATGATCTAGAGAAGCATGTATGTTCAATA
..................................................(((.((((.((((....)))).)))).))).........................................................................................................................................................................
..................................................51....................................................105..............................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189784SRR189783SRR037937(GSM510475)
293cand2. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577738(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR191480(GSM715590)
38genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191500(GSM715610)
7genomic small RNA (size selected RNA from to. (breast)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040024(GSM532909)
G613N. (cervix)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
................................................................TTTATATAAAGCTTGGAAC...................................................................................................................................................................... 192.000.00--------------2.00-------------------------------------
.................................................................................................TTAAAAAATCTGCCAGG....................................................................................................................................... 171.000.00------------------------------------------1.00---------