ID: uc003irb.2_intron_5_0_chr4_166215621_f.3p
GENE: (6)
chr4:166218561-166218810+


(4)
B-CELL
(1)
BRAIN
(1)
BREAST
(9)
CELL-LINE
(4)
CERVIX
(1)
KIDNEY
(2)
LIVER
(3)
OTHER
(14)
SKIN

Sense strand
AAAAAAAAAAGAACAGAAAAGAAATGGGGTGAATGGCTTTGTAAGTACATTGCAAGTCAGGATTTTGAAAACACTTGAGCTGTGAATTAAACTTGGATGTCTTAGCAAGAGTTATATATAAAATGTAGTCTCATATTTTATCCAGATGCCTTGATACACAACTCATTTCTTATTTTTTCTTCTCCTATATTTTCTGCAAGGTATTTGAAGCAGTAATAGCATGGGTGAACCATGACAAGGATGTGAGGCA
.................................................(((((((.((.((.(((((...(((.......)))..))))).))...)).))).))))..............................................................................................................................................
............................................45..................................................................113.......................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189787SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532880(GSM532880)
G659T. (cervix)
SRR189782SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784SRR040040(GSM532925)
G612N. (cervix)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532884(GSM532884)
G871T. (cervix)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
GSM532879(GSM532879)
G659N. (cervix)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
.................................................TTGCAAGTCAGGATTCTCT......................................................................................................................................................................................1923.000.0012.006.00-5.00-----------------------------------
...........................................................................................CTTGGATGTCTTAGCGAC.............................................................................................................................................185.000.00--------1.001.00----1.00------1.00---1.00-------------
...........................................................................................CTTGGATGTCTTAGCGAG.............................................................................................................................................184.000.00--------1.00---1.00--1.00------1.00----------------
.................................................TTGCAAGTCAGGATTCTC.......................................................................................................................................................................................184.000.003.001.00-------------------------------------
........................................................................................................................................................................CTTATTTTTTCTTCTCATTG..............................................................203.000.00------1.00----1.00--------1.00------------------
...............................................................................................................................................................................................................................GGTGAACCATGACAAGGATGTGAGGC.2612.002.00----2.00----------------------------------
.......................................................................................................................................................................................................................................ATGACAAGGATGTGAGGCA1912.002.00----2.00----------------------------------
...........................................................................................CTTGGATGTCTTAGCGA..............................................................................................................................................172.000.00------------1.00-----------1.00--------------
.......................................................................................................................................................................TCTTATTTTTTCTTCTGCTG...............................................................201.000.00------1.00--------------------------------
.................................................TTGCAAGTCAGGATTCTTT......................................................................................................................................................................................191.000.001.00--------------------------------------
.................................................TTGCAAGTCAGGATTTTCTA.....................................................................................................................................................................................201.000.001.00--------------------------------------
...........................................................................................................................................................................ATTTTTTCTTCTCCTAATCG...........................................................201.000.00------1.00--------------------------------
...................AGAAATGGGGTGAATGGCTGTAT................................................................................................................................................................................................................231.000.00-------1.00-------------------------------
..........................................................................................ACTTGGATGTCTTAGCGAG.............................................................................................................................................191.000.00---------1.00-----------------------------
................................................................................................................................TCTCATATTTTATCCCTTG.......................................................................................................191.000.00------1.00--------------------------------
.................................................TTGCAAGTCAGGATTTTCTAA....................................................................................................................................................................................211.000.001.00--------------------------------------
.......AAAGAACAGAAAAGACAGA................................................................................................................................................................................................................................191.000.00----------------1.00----------------------
.....................................TTTGTAAGTACATTGCAAAA.................................................................................................................................................................................................201.000.00----------1.00----------------------------
.....................................TTTGTAAGTACATTGGATA..................................................................................................................................................................................................191.000.00----------1.00----------------------------
..............................................................................................................................................................................................................................GGGTGAACCATGACAAGGATGT......2211.001.00----1.00----------------------------------
......................................................................................................................................................................................TCCTATATTTTCTGCAAACTA...............................................211.000.00-------1.00-------------------------------
...............................................CATTGCAAGTCAGGAAG..........................................................................................................................................................................................171.000.00------------------1.00--------------------
.....................................................................................................................................................................................................................................CCATGACAAGGATGTGAGG..1911.001.00--------------------------1.00------------
...........................................................................................CTTGGATGTCTTAGCTAG.............................................................................................................................................181.000.00-----------------------1.00---------------
................AAAAGAAATGGGGTGAATGGCTT...................................................................................................................................................................................................................2311.001.00-----------------1.00---------------------
...........................................................................................CTTGGATGTCTTAGCGCG.............................................................................................................................................181.000.00-----------------------------1.00---------
..........................................................................................ACTTGGATGTCTTAGCGA..............................................................................................................................................181.000.00-------------------1.00-------------------

Antisense strand
AAAAAAAAAAGAACAGAAAAGAAATGGGGTGAATGGCTTTGTAAGTACATTGCAAGTCAGGATTTTGAAAACACTTGAGCTGTGAATTAAACTTGGATGTCTTAGCAAGAGTTATATATAAAATGTAGTCTCATATTTTATCCAGATGCCTTGATACACAACTCATTTCTTATTTTTTCTTCTCCTATATTTTCTGCAAGGTATTTGAAGCAGTAATAGCATGGGTGAACCATGACAAGGATGTGAGGCA
.................................................(((((((.((.((.(((((...(((.......)))..))))).))...)).))).))))..............................................................................................................................................
............................................45..................................................................113.......................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189787SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532880(GSM532880)
G659T. (cervix)
SRR189782SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784SRR040040(GSM532925)
G612N. (cervix)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532884(GSM532884)
G871T. (cervix)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
GSM532879(GSM532879)
G659N. (cervix)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
...............................................................................CAAGTTTAATTCACAG........................................................................................................................................................... 1643.503.50--------0.25-----0.250.25--------------0.500.500.250.250.250.250.250.250.25
...AAAAAAAGAACAGAAAAAGT................................................................................................................................................................................................................................... 203.000.00--2.00----------1.00-------------------------
.AAAAAAAAAGAACAGAACATC.................................................................................................................................................................................................................................... 211.000.00-----1.00---------------------------------
........AAGAACAGAAAAGAAAAAG............................................................................................................................................................................................................................... 191.000.00---------------------------1.00-----------
..AAAAAAAAGAACAGAAAAGAAAGCAG.............................................................................................................................................................................................................................. 261.000.00--1.00------------------------------------
...AAAAAAAGAACAGAAAAGAGTC................................................................................................................................................................................................................................. 221.000.00--1.00------------------------------------
.AAAAAAAAAGAACAGGCTC...................................................................................................................................................................................................................................... 191.000.00-----1.00---------------------------------
.AAAAAAAAAGAACAGAAAAGAG................................................................................................................................................................................................................................... 221.000.00-----------1.00---------------------------
.AAAAAAAAAGAACAGAGAGC..................................................................................................................................................................................................................................... 201.000.00-----1.00---------------------------------
.......................................................GTCAGGATTTTGAAAGTCG................................................................................................................................................................................ 191.000.00-------1.00-------------------------------
.AAAAAAAAAGAACAGAAAAGAGT.................................................................................................................................................................................................................................. 231.000.00-------------1.00-------------------------