ID: uc003iqg.3_intron_19_0_chr4_160271442_f.3p
GENE: (20)
chr4:160273637-160273886+


(1)
CELL-LINE
(1)
CERVIX
(1)
FIBROBLAST
(2)
HEART
(2)
HELA
(1)
LIVER
(1)
OTHER
(2)
SKIN

Sense strand
ACTTCGATTAAACAACTTAAGCTTCATTAGAATAAAACATTTGTCTCTTAGTCATGTGGTCTCTACAAGTGAAATGGGGTTTTTCTCCCCACTTAAGAGATATCTATGCCTGCATTTTATTTTTGCTTCTATTTGGTAGACTTCCCTTTGATGTTATAAACCTAGAGAGTCTAATTAATACGGTTGTATTTCTCATGCAGGCTATACTTTGGCTCCCAGTGGTACTGTGGATAATTTTTCAGATTCTGGT
.............................................................................................................((((((.........(((..((((...((((((...(((((..((.....)).)))))))))))...)))).)))..........))))))..................................................
.............................................................................................................110.......................................................................................200................................................
SizePerfect hitTotal NormPerfect NormDRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR189785SRR040031(GSM532916)
G013T. (cervix)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR189786SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
.............................................................................................................................CTTCTATTTGGTAGACTTCCCTTTGATGTTATAAACCTAGAGAGTCTAATTAATACGGTTGTATTTCTCATGCAG..................................................75116.0016.0016.00-------------
..............................................................................................................................TTCTATTTGGTAGACTTCCCTTTGATGTTATAAACCTAGAGAGTCTAATTAATACGGTTGTATTTCTCATGCAG..................................................74114.0014.009.005.00------------
.................................................................................................................................TATTTGGTAGACTTCCCTTTGATGTTATAAACCTAGAGAGTCTAATTAATACGGTTGTATTTCTCATGCAG..................................................71113.0013.0013.00-------------
................................................................................................................................CTATTTGGTAGACTTCCCTTTGATGTTATAAACCTAGAGAGTCTAATTAATACGGTTGTATTTCTCATGCAG..................................................7218.008.008.00-------------
................................................................................................................................CTATTTGGTAGACTTCCCTTTGATGTTATAAACCTAGAGAGTCTAATTAATACGGTTGTATTTCTCATGC....................................................7018.008.00-8.00------------
........................................................................................................................................................................................................................................AATTTTTCAGATTCTCCAC193.000.00--3.00-----------
........................................................................................................................................................................................................................CAGTGGTACTGTGGAT..................1611.001.00---1.00----------
..................................................................................................................TTTTATTTTTGCTTCTCCT.....................................................................................................................191.000.00--1.00-----------
.........................................................................................................................................................................................................................AGTGGTACTGTGGATAATA..............191.000.00-----------1.00--
...................................................................................................................................................................................ACGGTTGTATTTCTCATGCAGA.................................................221.000.00-------------1.00
.........................................................................................................................................................................................................................AGTGGTACTGTGGATAATTT.............2011.001.00------1.00-------
....................................ACATTTGTCTCTTAGCCC....................................................................................................................................................................................................181.000.00--1.00-----------
.....................................................................................................................................................................................GGTTGTATTTCTCATGCAG..................................................1911.001.00---------1.00----
.........................................................................................................................................................................................................................AGTGGTACTGTGGATAATTTTTCAGA.......2611.001.00-----1.00--------
...........................................................................................................................................................................TAATTAATACGGTTGTAAAA...........................................................201.000.00------------1.00-
..........................................................................................................................................................................................................................................TTTTTCAGATTCTGGAATG191.000.00-------1.00------
.......................................................................AAATGGGGTTTTTCTCCCCACT.............................................................................................................................................................2211.001.00--------1.00-----

Antisense strand
ACTTCGATTAAACAACTTAAGCTTCATTAGAATAAAACATTTGTCTCTTAGTCATGTGGTCTCTACAAGTGAAATGGGGTTTTTCTCCCCACTTAAGAGATATCTATGCCTGCATTTTATTTTTGCTTCTATTTGGTAGACTTCCCTTTGATGTTATAAACCTAGAGAGTCTAATTAATACGGTTGTATTTCTCATGCAGGCTATACTTTGGCTCCCAGTGGTACTGTGGATAATTTTTCAGATTCTGGT
.............................................................................................................((((((.........(((..((((...((((((...(((((..((.....)).)))))))))))...)))).)))..........))))))..................................................
.............................................................................................................110.......................................................................................200................................................
SizePerfect hitTotal NormPerfect NormDRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR189785SRR040031(GSM532916)
G013T. (cervix)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR189786SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
....................................................................................................................TTATTTTTGCTTCTATG..................................................................................................................... 171.000.00----1.00---------
.........................................................GGTCTCTACAAGTGACTGT.............................................................................................................................................................................. 191.000.00----------1.00---