ID: uc003ijw.3_intron_3_0_chr4_146017264_r.5p
GENE: (1)
chr4:146019083-146019332-


(5)
B-CELL
(1)
BRAIN
(10)
BREAST
(26)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(3)
HEART
(3)
HELA
(3)
LIVER
(2)
OTHER
(1)
RRP40.ip
(42)
SKIN
(1)
TESTES
(2)
UTERUS
(1)
XRN.ip

Sense strand
GAAGCCAGCTGCTGGAGGTGCCGAGAATCTGAGTTTCGGCAAGCAGCCAGGTCTGGAAACTGTGAGTGTGTGGGCTTTTCTCCGACGTCGAGCGTGGTCCTAGCGTAAACAGATGCATTCGCCTCTCCGGTTTCAATCTTTTTTTACGTTTGCGCTTTCCTCAAGGCCGGTGGGTCAGGAGTGGAGCCTTAGTCATTCTAACGCTGGAGGTGTCAGTAGGACCAACAGAGTCTGGTGCCGACACGGCTTA
.........................................................................................................................................................((((..(((..((((....))))..)))..))))...............................................................
..............................................................................................................................................143......................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189782SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR029124(GSM416753)
HeLa. (hela)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR191447(GSM715557)
142genomic small RNA (size selected RNA from . (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189783SRR029129(GSM416758)
SW480. (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191500(GSM715610)
7genomic small RNA (size selected RNA from to. (breast)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR029126(GSM416755)
143B. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR038860(GSM458543)
MM426. (cell line)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)
SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)
TAX577589(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040015(GSM532900)
G623T. (cervix)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
...............................................................................................................................................................................CAGGAGTGGAGCCTTCGGC........................................................1932.000.00-1.00--3.00-2.00-2.002.00--2.001.00-------2.00---1.00-------2.00-1.001.00--1.001.00---1.001.001.00-1.00-1.00--------1.00---1.00-----------------1.00-----1.00------1.00---------
..............................................................................................................................................................................TCAGGAGTGGAGCCTGCGG.........................................................1913.000.00-3.00--1.00--1.00--1.00------1.00--1.00----------1.00--1.00-------1.00-------------1.00----------------1.00------------------------------
...............................................................................................................................................................................CAGGAGTGGAGCCTTCGG.........................................................189.000.00-1.00--------1.00--1.00---------2.00--1.00----------1.00--------------------------1.001.00--------------------------------------
..............................................................................................................................................................................TCAGGAGTGGAGCCTGCG..........................................................188.000.00------1.001.00--1.00-1.00---1.00---------------1.00-1.00----------------1.00----------------------------------------------------
................................................AGGTCTGGAAACTGTGAG........................................................................................................................................................................................1817.007.002.00---------------------1.00-------2.00---------------------------------------------------1.00-----------------1.00---
......................GAGAATCTGAGTTTCGGCAAGCA.............................................................................................................................................................................................................2316.006.006.00-------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................GTCAGTAGGACCAACAGAG....................1914.004.00---4.00----------------------------------------------------------------------------------------------------
......AGCTGCTGGAGGTGCCGAGAATCTGAGTTTC.....................................................................................................................................................................................................................3113.003.00--3.00-----------------------------------------------------------------------------------------------------
...................................................................................................................................................GTTTGCGCTTTCCTCTG......................................................................................173.000.00--------------------------------------------------------------------1.00---1.00------------------------1.00------
...............................................................................................................................................................................CAGGAGTGGAGCCTTCG..........................................................173.000.00--------------------1.00-----1.00--------------------------------------------------------1.00--------------------
................................................AGGTCTGGAAACTGTGAGTG......................................................................................................................................................................................2013.003.003.00-------------------------------------------------------------------------------------------------------
........................GAATCTGAGTTTCGGACGT...............................................................................................................................................................................................................192.000.00------------------1.00---------------------------------1.00---------------------------------------------------
.....................................GGCAAGCAGCCAGGTCTGGAAACTGT...........................................................................................................................................................................................2612.002.00----------------------------1.00-----------------------------------------1.00---------------------------------
..............................GAGTTTCGGCAAGCAGCCAGGT......................................................................................................................................................................................................2212.002.002.00-------------------------------------------------------------------------------------------------------
....................................CGGCAAGCAGCCAGGTCTGGAAACTGT...........................................................................................................................................................................................2712.002.00------------------------------------1.00--------------------------------------------------------1.00----------
.............................TGAGTTTCGGCAAGCAGCCAGGTCTG...................................................................................................................................................................................................2612.002.00---------------2.00----------------------------------------------------------------------------------------
.......................................CAAGCAGCCAGGTCTGGAAACT.............................................................................................................................................................................................2211.001.00-------------------------------1.00------------------------------------------------------------------------
...........................TCTGAGTTTCGGCAAGCAGCCAT........................................................................................................................................................................................................231.000.00---------------------------------------------------------1.00----------------------------------------------
.......................................................................GGGCTTTTCTCCGACGTCG................................................................................................................................................................1911.001.00-------------------------------------------------------------------------------1.00------------------------
..........................ATCTGAGTTTCGGCAAGCAGCC..........................................................................................................................................................................................................2211.001.00------------------------------------------------------------1.00-------------------------------------------
......................GAGAATCTGAGTTTCGGCAAGCAG............................................................................................................................................................................................................2411.001.001.00-------------------------------------------------------------------------------------------------------
.............GGAGGTGCCGAGAATCTGAA.........................................................................................................................................................................................................................201.000.00------------------------------------------------------------------------------------------------1.00-------
..................................................................................................................................................CGTTTGCGCTTTCCTCTG......................................................................................181.000.00-------------------------------------------------------------1.00------------------------------------------
...............................................................................................................................................................................................................AGGTGTCAGTAGGACCAA.........................1811.001.00-------------------------------------------------------------------------------------1.00------------------
...........CTGGAGGTGCCGAGAATCTGAGTTTCG....................................................................................................................................................................................................................2711.001.00-----------------1.00--------------------------------------------------------------------------------------
................................................................................................................................................................................................................GGTGTCAGTAGGACCAACAGAG....................2211.001.00-------------------1.00------------------------------------------------------------------------------------
..............................................................................................................................................................................TCAGGAGTGGAGCCTGTG..........................................................181.000.00-------------------------------------------------1.00------------------------------------------------------
....................................CGGCAAGCAGCCAGGTCTGGAAA...............................................................................................................................................................................................2311.001.00-----------------------------------------------------------------------------------------1.00--------------
.........................AATCTGAGTTTCGGCAAGCAGC...........................................................................................................................................................................................................2211.001.00--------------------------------------------------------------------------------------1.00-----------------
..................................................................................................................................................CGTTTGCGCTTTCCTCTA......................................................................................181.000.00-----------------------------------------------------------------------1.00--------------------------------
.............................................GCCAGGTCTGGAAACTGTAA.........................................................................................................................................................................................2011.001.00--------------1.00-----------------------------------------------------------------------------------------
...................................................TCTGGAAACTGTGAGTGTGTGG.................................................................................................................................................................................2211.001.00-----------------------------------------------1.00--------------------------------------------------------
...........................................CAGCCAGGTCTGGAAACTGTGAG........................................................................................................................................................................................2311.001.00------------------------1.00-------------------------------------------------------------------------------
...............................................................................................................................................................................CAGGAGTGGAGCCTTTGT.........................................................181.000.00-1.00------------------------------------------------------------------------------------------------------
............................CTGAGTTTCGGCAAGCAGCCAG........................................................................................................................................................................................................2211.001.00----------------------------------------------------------------------------1.00---------------------------
...................................TCGGCAAGCAGCCAGGT......................................................................................................................................................................................................1711.001.00------------------------------------------------------------------------------------------1.00-------------
........CTGCTGGAGGTGCCGAGAAT..............................................................................................................................................................................................................................2011.001.00------------------------------------------------------1.00-------------------------------------------------
..............................................................................................................................................................................................................GAGGTGTCAGTAGGACCAACAGAGTCTGGTGC............3211.001.00----1.00---------------------------------------------------------------------------------------------------
.............................................GCCAGGTCTGGAAACTGTGAGTGTGT...................................................................................................................................................................................2611.001.00--------------------------------------------------------------------------------1.00-----------------------
...............................................................................................................................................................................CAGGAGTGGAGCCTTGCA.........................................................181.000.00--------------------------------1.00-----------------------------------------------------------------------
.................................TTTCGGCAAGCAGCCAGGTCTGGAAACTGTGA.........................................................................................................................................................................................3211.001.00------------------------1.00-------------------------------------------------------------------------------
........................................................................................................................................TCTTTTTTTACGTTTGTTAT..............................................................................................201.000.00---------------------------------------------------------------------------------------------------1.00----
................................................................................................................................................................................AGGAGTGGAGCCTTAGA.........................................................171.000.00-------1.00------------------------------------------------------------------------------------------------
...................GCCGAGAATCTGAGTTTCG....................................................................................................................................................................................................................1911.001.00--------------------------------------------------------------------------------------------------1.00-----
.................................TTTCGGCAAGCAGCCAGGTCTGGAA................................................................................................................................................................................................2511.001.00----------------------------------------------------------------------------------------1.00---------------
...........................TCTGAGTTTCGGCAAGCAGCC..........................................................................................................................................................................................................2111.001.001.00-------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................AGTCATTCTAACGCTGGAGG........................................2011.001.00-----------------------------1.00--------------------------------------------------------------------------
........................GAATCTGAGTTTCGGTCTT...............................................................................................................................................................................................................191.000.00-------------------------------------------------------------------------------------------1.00------------
.........................................AGCAGCCAGGTCTGGAAACTGTGAGCGTG....................................................................................................................................................................................291.000.00---------------------------1.00----------------------------------------------------------------------------
......................GAGAATCTGAGTTTCGGCAAG...............................................................................................................................................................................................................2111.001.00----------------------1.00---------------------------------------------------------------------------------
....................CCGAGAATCTGAGTTTCGGC..................................................................................................................................................................................................................2011.001.00---1.00----------------------------------------------------------------------------------------------------
...............................................................................................................................................................................CAGGAGTGGAGCCTTAGGTAA......................................................211.000.00---------------1.00----------------------------------------------------------------------------------------
.......................................................................GGGCTTTTCTCCGACGTCGAG..............................................................................................................................................................2111.001.00-------------------------------------------------------------------1.00------------------------------------
............TGGAGGTGCCGAGAATCTGA..........................................................................................................................................................................................................................2011.001.00----------------------------------------------------------1.00---------------------------------------------
..................................TTCGGCAAGCAGCCAGGT......................................................................................................................................................................................................1811.001.00-----------------------------------------1.00--------------------------------------------------------------
..........................................................ACTGTGAGTGTGTGGGC...............................................................................................................................................................................1711.001.00--1.00-----------------------------------------------------------------------------------------------------
...............................................................................................................................................................................CAGGAGTGGAGCCTTCGTC........................................................191.000.00---------1.00----------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................ACAGAGTCTGGTGCCGACACG.....2111.001.00---------------------------------------------------------------------------1.00----------------------------
...................................................................GTGTGGGCTTTTCTCCGACGTCGAG..............................................................................................................................................................2511.001.00-------------------------------------------------------1.00------------------------------------------------
.............................................GCCAGGTCTGGAAACTGT...........................................................................................................................................................................................1811.001.00-------------------------------------------1.00------------------------------------------------------------
..................................................GTCTGGAAACTGTGAGTGTGTGGGCTTTTCT.........................................................................................................................................................................3111.001.00-----1.00--------------------------------------------------------------------------------------------------
.............................................................GTGAGTGTGTGGGCTTTTCTCCGACGTC.................................................................................................................................................................2811.001.00-----------------------------------1.00--------------------------------------------------------------------
..................................................................................................................................................CGTTTGCGCTTTCCTCT.......................................................................................171.000.00-----------------------------------------------------------------------------1.00--------------------------
........................GAATCTGAGTTTCGGGCGT...............................................................................................................................................................................................................191.000.00------------------1.00-------------------------------------------------------------------------------------
..........GCTGGAGGTGCCGAGAATCTG...........................................................................................................................................................................................................................2111.001.00-----------------------------------------------------------------------------------------------1.00--------
...............AGGTGCCGAGAATCTGA..........................................................................................................................................................................................................................1711.001.00--------1.00-----------------------------------------------------------------------------------------------
.....................................................................................................................................................TTGCGCTTTCCTCAAGGCCGGTGGGCC..........................................................................271.000.00---------------------------1.00----------------------------------------------------------------------------
....................................CGGCAAGCAGCCAGGTCTGGAAACTGTG..........................................................................................................................................................................................2811.001.00-----------------------------1.00--------------------------------------------------------------------------
...................................................................GTGTGGGCTTTTCTCCGCT....................................................................................................................................................................191.000.00-------------------------1.00------------------------------------------------------------------------------
......................GAGAATCTGAGTTTCGGCAAGCAGCCA.........................................................................................................................................................................................................2711.001.00------------------------------------------------------------------------------1.00-------------------------
..................................................GTCTGGAAACTGTGAGTGTG....................................................................................................................................................................................2011.001.00--------------1.00-----------------------------------------------------------------------------------------
.....................CGAGAATCTGAGTTTCGGC..................................................................................................................................................................................................................1911.001.00--------------------------------------------------------------1.00-----------------------------------------
....................................CGGCAAGCAGCCAGGTCTGGAAACTG............................................................................................................................................................................................2611.001.00-------------------1.00------------------------------------------------------------------------------------
...........CTGGAGGTGCCGAGAATCTG...........................................................................................................................................................................................................................2011.001.00-----1.00--------------------------------------------------------------------------------------------------
..................................TTCGGCAAGCAGCCAGGTCTG...................................................................................................................................................................................................2111.001.00------------------------------------------------------------------1.00-------------------------------------
....................................CGGCAAGCAGCCAGGTCTGGAAACTGTGAGT.......................................................................................................................................................................................3111.001.00----------------------------1.00---------------------------------------------------------------------------
...GCCAGCTGCTGGAGGTGC.....................................................................................................................................................................................................................................1830.330.33------------------------------------------------------------------------------------------------------0.33-
..........................................GCAGCCAGGTCTGGAAA...............................................................................................................................................................................................1730.330.33-----------------------------------------------------------------------------------------------------0.33--
................................................AGGTCTGGAAACTGTG..........................................................................................................................................................................................1650.200.20--------------------------------------0.20-----------------------------------------------------------------
..AGCCAGCTGCTGGAGGTG......................................................................................................................................................................................................................................1850.200.20-------------------------------------------------------------------------------------------------------0.20
................................................AGGTCTGGAAACTGT...........................................................................................................................................................................................1580.120.12----------------0.12---------------------------------------------------------------------------------------

Antisense strand
GAAGCCAGCTGCTGGAGGTGCCGAGAATCTGAGTTTCGGCAAGCAGCCAGGTCTGGAAACTGTGAGTGTGTGGGCTTTTCTCCGACGTCGAGCGTGGTCCTAGCGTAAACAGATGCATTCGCCTCTCCGGTTTCAATCTTTTTTTACGTTTGCGCTTTCCTCAAGGCCGGTGGGTCAGGAGTGGAGCCTTAGTCATTCTAACGCTGGAGGTGTCAGTAGGACCAACAGAGTCTGGTGCCGACACGGCTTA
.........................................................................................................................................................((((..(((..((((....))))..)))..))))...............................................................
..............................................................................................................................................143......................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189782SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR029124(GSM416753)
HeLa. (hela)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR191447(GSM715557)
142genomic small RNA (size selected RNA from . (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189783SRR029129(GSM416758)
SW480. (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191500(GSM715610)
7genomic small RNA (size selected RNA from to. (breast)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR029126(GSM416755)
143B. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR038860(GSM458543)
MM426. (cell line)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)
SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)
TAX577589(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040015(GSM532900)
G623T. (cervix)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
.......................................................................................................................................................................................................................................AGCCGTGTCGGCACCAG.. 1713.003.00-----------3.00--------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................CGGCACCAGACTCTGTTGG.......... 1913.003.002.00----1.00--------------------------------------------------------------------------------------------------
.........................................................................................................................................................CGGCCTTGAGGAAAGC................................................................................. 1612.002.00------1.00------------------------------1.00------------------------------------------------------------------
........................................................................................................................................................ACCGGCCTTGAGGAAAGCG............................................................................... 1911.001.00--1.00-----------------------------------------------------------------------------------------------------
.........................................................................................................................................................GCTTTCCTCAAGGCCGACAG............................................................................. 201.000.00------------------------------------------------------------------------------------1.00-------------------
.........................................................................................................................................................GCTTTCCTCAAGGCCGA................................................................................ 171.000.00---------------------------------------------------------------------1.00----------------------------------
......................................................................................................................................................................................GTTAGAATGACTAAGGCTCC................................................ 2011.001.00-----------------------------------------------------1.00--------------------------------------------------
.....................................................................................................................................................................................................................CAGTAGGACCAACAGAGTC.................. 191.000.00--------------------------------------------------------------------------1.00-----------------------------
........................................................................................................................................................................................................................ACCAGACTCTGTTGGTCCTA.............. 2011.001.00--------------1.00-----------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................TCGGCACCAGACTCTGTTG......... 1911.001.00--------------------------------------1.00-----------------------------------------------------------------
.................................................................................................................................................................................................................................CAGAGTCTGGTGCCGAAAA...... 191.000.00----------------1.00---------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................ACTCTGTTGGTCCTACTG................... 1811.001.00-----1.00--------------------------------------------------------------------------------------------------
.....................................................................................................................................CAATCTTTTTTTACGTGTG.................................................................................................. 191.000.00-------------1.00------------------------------------------------------------------------------------------