ID: uc003ijv.3_intron_3_0_chr4_146017264_r.5p
GENE: (1)
chr4:146019072-146019321-


(6)
B-CELL 		(1)
BRAIN 		(8)
BREAST 		(27)
CELL-LINE 		(2)
CERVIX 		(1)
FIBROBLAST 		(2)
HEART 		(3)
HELA 		(2)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(41)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
CTGGAGGTGCCGAGAATCTGAGTTTCGGCAAGCAGCCAGGTCTGGAAACTGTGAGTGTGTGGGCTTTTCTCCGACGTCGAGCGTGGTCCTAGCGTAAACAGATGCATTCGCCTCTCCGGTTTCAATCTTTTTTTACGTTTGCGCTTTCCTCAAGGCCGGTGGGTCAGGAGTGGAGCCTTAGTCATTCTAACGCTGGAGGTGTCAGTAGGACCAACAGAGTCTGGTGCCGACACGGCTTACTGTTGCGCGC
..............................................................................................................................................((((..(((..((((....))))..)))..))))..........................................................................
...................................................................................................................................132....................................................187.............................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191447(GSM715557)
142genomic small RNA (size selected RNA from . (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189783SRR029129(GSM416758)
SW480. (cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		GSM359192(GSM359192)
HepG2_3pM_6. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191500(GSM715610)
7genomic small RNA (size selected RNA from to. (breast)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR029126(GSM416755)
143B. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038860(GSM458543)
MM426. (cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)		TAX577589(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
....................................................................................................................................................................CAGGAGTGGAGCCTTCGGC...................................................................1932.000.00-1.00-3.00-2.00-2.002.00--2.001.00---------2.00---1.00-------2.00-1.001.00--1.001.00---1.001.001.00-1.00-1.00--------1.00---1.00-----------------1.00-----1.00-----1.00------
...................................................................................................................................................................TCAGGAGTGGAGCCTGCGG....................................................................1913.000.00-3.00-1.00--1.00--1.00--------1.00--1.00----------1.00--1.00-------1.00------------1.00-----------------1.00--------------------------
....................................................................................................................................................................CAGGAGTGGAGCCTTCGG....................................................................189.000.00-1.00-------1.00--1.00-----------2.00--1.00----------1.00--------------------------1.001.00----------------------------------
...................................................................................................................................................................TCAGGAGTGGAGCCTGCG.....................................................................188.000.00-----1.001.00--1.00-1.00---1.00-----------------1.00-1.00----------------1.00------------------------------------------------
.....................................AGGTCTGGAAACTGTGAG...................................................................................................................................................................................................1817.007.002.00----------------------1.00-------2.00---------------------------------------------------1.00---------------1.00-
...........GAGAATCTGAGTTTCGGCAAGCA........................................................................................................................................................................................................................2316.006.006.00----------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................GTCAGTAGGACCAACAGAG...............................1914.004.00--4.00--------------------------------------------------------------------------------------------------
........................................................................................................................................GTTTGCGCTTTCCTCTG.................................................................................................173.000.00---------------------------------------------------------------------1.00---1.00----------------------1.00----
....................................................................................................................................................................CAGGAGTGGAGCCTTCG.....................................................................173.000.00---------------------1.00-----1.00--------------------------------------------------------1.00----------------
.....................................AGGTCTGGAAACTGTGAGTG.................................................................................................................................................................................................2013.003.003.00----------------------------------------------------------------------------------------------------
.............GAATCTGAGTTTCGGACGT..........................................................................................................................................................................................................................192.000.00-------------------1.00---------------------------------1.00-----------------------------------------------
..........................GGCAAGCAGCCAGGTCTGGAAACTGT......................................................................................................................................................................................................2612.002.00-----------------------------1.00-----------------------------------------1.00-----------------------------
.......................................................................................................................................................................................................................................ACGGCTTACTGTTGCGCG.1812.002.00-----------------2.00-----------------------------------------------------------------------------------
...................GAGTTTCGGCAAGCAGCCAGGT.................................................................................................................................................................................................................2212.002.002.00----------------------------------------------------------------------------------------------------
.........................CGGCAAGCAGCCAGGTCTGGAAACTGT......................................................................................................................................................................................................2712.002.00-------------------------------------1.00-------------------------------------------------------1.00-------
..................TGAGTTTCGGCAAGCAGCCAGGTCTG..............................................................................................................................................................................................................2612.002.00--------------2.00--------------------------------------------------------------------------------------
............................CAAGCAGCCAGGTCTGGAAACT........................................................................................................................................................................................................2211.001.00--------------------------------1.00--------------------------------------------------------------------
................TCTGAGTTTCGGCAAGCAGCCAT...................................................................................................................................................................................................................231.000.00---------------------------------------------------------1.00-------------------------------------------
............................................................GGGCTTTTCTCCGACGTCG...........................................................................................................................................................................1911.001.00--------------------------------------------------------------------------------1.00--------------------
...............ATCTGAGTTTCGGCAAGCAGCC.....................................................................................................................................................................................................................2211.001.00-------------------------------------------------------------1.00---------------------------------------
...........GAGAATCTGAGTTTCGGCAAGCAG.......................................................................................................................................................................................................................2411.001.001.00----------------------------------------------------------------------------------------------------
..GGAGGTGCCGAGAATCTGAA....................................................................................................................................................................................................................................201.000.00-----------------------------------------------------------------------------------------------1.00-----
.......................................................................................................................................CGTTTGCGCTTTCCTCTG.................................................................................................181.000.00--------------------------------------------------------------1.00--------------------------------------
....................................................................................................................................................................................................AGGTGTCAGTAGGACCAA....................................1811.001.00--------------------------------------------------------------------------------------1.00--------------
.....................................................................................................................................................................................................GGTGTCAGTAGGACCAACAGAG...............................2211.001.00--------------------1.00--------------------------------------------------------------------------------
...................................................................................................................................................................TCAGGAGTGGAGCCTGTG.....................................................................181.000.00--------------------------------------------------1.00--------------------------------------------------
.........................CGGCAAGCAGCCAGGTCTGGAAA..........................................................................................................................................................................................................2311.001.00------------------------------------------------------------------------------------------1.00----------
..............AATCTGAGTTTCGGCAAGCAGC......................................................................................................................................................................................................................2211.001.00---------------------------------------------------------------------------------------1.00-------------
.......................................................................................................................................CGTTTGCGCTTTCCTCTA.................................................................................................181.000.00------------------------------------------------------------------------1.00----------------------------
..................................GCCAGGTCTGGAAACTGTAA....................................................................................................................................................................................................2011.001.00-------------1.00---------------------------------------------------------------------------------------
........................................TCTGGAAACTGTGAGTGTGTGG............................................................................................................................................................................................2211.001.00------------------------------------------------1.00----------------------------------------------------
................................CAGCCAGGTCTGGAAACTGTGAG...................................................................................................................................................................................................2311.001.00-------------------------1.00---------------------------------------------------------------------------
....................................................................................................................................................................CAGGAGTGGAGCCTTTGT....................................................................181.000.00-1.00---------------------------------------------------------------------------------------------------
.................CTGAGTTTCGGCAAGCAGCCAG...................................................................................................................................................................................................................2211.001.00-----------------------------------------------------------------------------1.00-----------------------
........................TCGGCAAGCAGCCAGGT.................................................................................................................................................................................................................1711.001.00-------------------------------------------------------------------------------------------1.00---------
...................................................................................................................................................................................................GAGGTGTCAGTAGGACCAACAGAGTCTGGTGC.......................3211.001.00---1.00-------------------------------------------------------------------------------------------------
..................................GCCAGGTCTGGAAACTGTGAGTGTGT..............................................................................................................................................................................................2611.001.00---------------------------------------------------------------------------------1.00-------------------
....................................................................................................................................................................CAGGAGTGGAGCCTTGCA....................................................................181.000.00---------------------------------1.00-------------------------------------------------------------------
......................TTTCGGCAAGCAGCCAGGTCTGGAAACTGTGA....................................................................................................................................................................................................3211.001.00-------------------------1.00---------------------------------------------------------------------------
.............................................................................................................................TCTTTTTTTACGTTTGTTAT.........................................................................................................201.000.00--------------------------------------------------------------------------------------------------1.00--
.....................................................................................................................................................................AGGAGTGGAGCCTTAGA....................................................................171.000.00------1.00----------------------------------------------------------------------------------------------
........GCCGAGAATCTGAGTTTCG...............................................................................................................................................................................................................................1911.001.00-------------------------------------------------------------------------------------------------1.00---
......................TTTCGGCAAGCAGCCAGGTCTGGAA...........................................................................................................................................................................................................2511.001.00-----------------------------------------------------------------------------------------1.00-----------
................TCTGAGTTTCGGCAAGCAGCC.....................................................................................................................................................................................................................2111.001.001.00----------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGTCATTCTAACGCTGGAGG...................................................2011.001.00------------------------------1.00----------------------------------------------------------------------
.............GAATCTGAGTTTCGGTCTT..........................................................................................................................................................................................................................191.000.00--------------------------------------------------------------------------------------------1.00--------
..............................AGCAGCCAGGTCTGGAAACTGTGAGCGTG...............................................................................................................................................................................................291.000.00----------------------------1.00------------------------------------------------------------------------
...........GAGAATCTGAGTTTCGGCAAG..........................................................................................................................................................................................................................2111.001.00-----------------------1.00-----------------------------------------------------------------------------
.........CCGAGAATCTGAGTTTCGGC.............................................................................................................................................................................................................................2011.001.00--1.00--------------------------------------------------------------------------------------------------
....................................................................................................................................................................CAGGAGTGGAGCCTTAGGTAA.................................................................211.000.00--------------1.00--------------------------------------------------------------------------------------
............................................................GGGCTTTTCTCCGACGTCGAG.........................................................................................................................................................................2111.001.00--------------------------------------------------------------------1.00--------------------------------
.TGGAGGTGCCGAGAATCTGA.....................................................................................................................................................................................................................................2011.001.00-----------------------------------------------------------1.00-----------------------------------------
.......................TTCGGCAAGCAGCCAGGT.................................................................................................................................................................................................................1811.001.00------------------------------------------1.00----------------------------------------------------------
...............................................ACTGTGAGTGTGTGGGC..........................................................................................................................................................................................1711.001.00----------------1.00------------------------------------------------------------------------------------
....................................................................................................................................................................CAGGAGTGGAGCCTTCGTC...................................................................191.000.00--------1.00--------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................ACAGAGTCTGGTGCCGACACG................2111.001.00----------------------------------------------------------------------------1.00------------------------
........................................................GTGTGGGCTTTTCTCCGACGTCGAG.........................................................................................................................................................................2511.001.00-------------------------------------------------------1.00---------------------------------------------
..................................GCCAGGTCTGGAAACTGT......................................................................................................................................................................................................1811.001.00--------------------------------------------1.00--------------------------------------------------------
.......................................GTCTGGAAACTGTGAGTGTGTGGGCTTTTCT....................................................................................................................................................................................3111.001.00----1.00------------------------------------------------------------------------------------------------
..................................................GTGAGTGTGTGGGCTTTTCTCCGACGTC............................................................................................................................................................................2811.001.00------------------------------------1.00----------------------------------------------------------------
.......................................................................................................................................CGTTTGCGCTTTCCTCT..................................................................................................171.000.00------------------------------------------------------------------------------1.00----------------------
.............GAATCTGAGTTTCGGGCGT..........................................................................................................................................................................................................................191.000.00-------------------1.00---------------------------------------------------------------------------------
....AGGTGCCGAGAATCTGA.....................................................................................................................................................................................................................................1711.001.00-------1.00---------------------------------------------------------------------------------------------
..........................................................................................................................................TTGCGCTTTCCTCAAGGCCGGTGGGCC.....................................................................................271.000.00----------------------------1.00------------------------------------------------------------------------
.........................CGGCAAGCAGCCAGGTCTGGAAACTGTG.....................................................................................................................................................................................................2811.001.00------------------------------1.00----------------------------------------------------------------------
........................................................GTGTGGGCTTTTCTCCGCT...............................................................................................................................................................................191.000.00--------------------------1.00--------------------------------------------------------------------------
...........GAGAATCTGAGTTTCGGCAAGCAGCCA....................................................................................................................................................................................................................2711.001.00-------------------------------------------------------------------------------1.00---------------------
.......................................GTCTGGAAACTGTGAGTGTG...............................................................................................................................................................................................2011.001.00-------------1.00---------------------------------------------------------------------------------------
..........CGAGAATCTGAGTTTCGGC.............................................................................................................................................................................................................................1911.001.00---------------------------------------------------------------1.00-------------------------------------
.........................CGGCAAGCAGCCAGGTCTGGAAACTG.......................................................................................................................................................................................................2611.001.00--------------------1.00--------------------------------------------------------------------------------
.......................TTCGGCAAGCAGCCAGGTCTG..............................................................................................................................................................................................................2111.001.00-------------------------------------------------------------------1.00---------------------------------
.........................CGGCAAGCAGCCAGGTCTGGAAACTGTGAGT..................................................................................................................................................................................................3111.001.00-----------------------------1.00-----------------------------------------------------------------------
...............................GCAGCCAGGTCTGGAAA..........................................................................................................................................................................................................1730.330.33----------------------------------------------------------------------------------------------------0.33
.....................................AGGTCTGGAAACTGTG.....................................................................................................................................................................................................1650.200.20---------------------------------------0.20-------------------------------------------------------------
.....................................AGGTCTGGAAACTGT......................................................................................................................................................................................................1580.120.12---------------0.12-------------------------------------------------------------------------------------

Antisense strand
CTGGAGGTGCCGAGAATCTGAGTTTCGGCAAGCAGCCAGGTCTGGAAACTGTGAGTGTGTGGGCTTTTCTCCGACGTCGAGCGTGGTCCTAGCGTAAACAGATGCATTCGCCTCTCCGGTTTCAATCTTTTTTTACGTTTGCGCTTTCCTCAAGGCCGGTGGGTCAGGAGTGGAGCCTTAGTCATTCTAACGCTGGAGGTGTCAGTAGGACCAACAGAGTCTGGTGCCGACACGGCTTACTGTTGCGCGC
..............................................................................................................................................((((..(((..((((....))))..)))..))))..........................................................................
...................................................................................................................................132....................................................187.............................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191447(GSM715557)
142genomic small RNA (size selected RNA from . (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189783SRR029129(GSM416758)
SW480. (cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		GSM359192(GSM359192)
HepG2_3pM_6. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191500(GSM715610)
7genomic small RNA (size selected RNA from to. (breast)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR029126(GSM416755)
143B. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038860(GSM458543)
MM426. (cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)		TAX577589(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
............................................................................................................................................................................................................................AGCCGTGTCGGCACCAG............. 1713.003.00----------3.00------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................CGGCACCAGACTCTGTTGG..................... 1913.003.002.00---1.00------------------------------------------------------------------------------------------------
..............................................................................................................................................CGGCCTTGAGGAAAGC............................................................................................ 1612.002.00-----1.00--------------------------------1.00--------------------------------------------------------------
.............................................................................................................................................ACCGGCCTTGAGGAAAGCG.......................................................................................... 1911.001.00----------------1.00------------------------------------------------------------------------------------
..............................................................................................................................................GCTTTCCTCAAGGCCGACAG........................................................................................ 201.000.00-------------------------------------------------------------------------------------1.00---------------
..............................................................................................................................................GCTTTCCTCAAGGCCGA........................................................................................... 171.000.00----------------------------------------------------------------------1.00------------------------------
...........................................................................................................................................................................GTTAGAATGACTAAGGCTCC........................................................... 2011.001.00------------------------------------------------------1.00----------------------------------------------
..........................................................................................................................................................................................................CAGTAGGACCAACAGAGTC............................. 191.000.00---------------------------------------------------------------------------1.00-------------------------
.........................................................................................................................................................................................................................AACAGTAAGCCGTGTCGGCACCAGACT...... 2711.001.00----------------------------------------------------------1.00------------------------------------------
.............................................................................................................................................................................................................ACCAGACTCTGTTGGTCCTA......................... 2011.001.00-------------1.00---------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TCGGCACCAGACTCTGTTG.................... 1911.001.00---------------------------------------1.00-------------------------------------------------------------
......................................................................................................................................................................................................................CAGAGTCTGGTGCCGAAAA................. 191.000.00---------------1.00-------------------------------------------------------------------------------------
..........................................................................................................................................................................................................ACTCTGTTGGTCCTACTG.............................. 1811.001.00----1.00------------------------------------------------------------------------------------------------
..........................................................................................................................CAATCTTTTTTTACGTGTG............................................................................................................. 191.000.00------------1.00----------------------------------------------------------------------------------------