| (5) B-CELL | (1) BRAIN | (22) CELL-LINE | (1) HELA | (1) LIVER | (3) OTHER | (1) RRP40.ip | (9) SKIN | (1) XRN.ip |
| GTAGATCTGAGTGCTCATTGTGGGTCATGGCCACTTTCTTGTATCTCAAATATCCTCTGCAATTCTGGAAGGGGGAGAAGGTAAAAATAGGAGAGGACTCTGGCTCAAAGGGGGAGGGTTCTGTAAATTGGAAGTATCACTTTAGATGGTGAAACATTTTCTTGCTAGTTATGTAATTCTGATATGCTTTTAACTTCCAGTTCCTAGGAAAGAAGTTGTTTCAACTCTCATTGGAGGAAGTATAAGGTGA .............................................................................................((((((((..((.....))..))))))))................................................................................................................................ ...............................................................64...................................................................133................................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR037941(GSM510479) 293DroshaTN. (cell line) | SRR033712(GSM497057) Burkitt Lymphoma (BL510). (B cell) | SRR207116(GSM721078) Nuclear RNA. (cell line) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR037935(GSM510473) 293cand3. (cell line) | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR037937(GSM510475) 293cand2. (cell line) | SRR033732(GSM497077) bjab cell line (bjab103). (B cell) | SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line) | DRR001485(DRX001039) "Hela long total cell fraction, LNA(+)". (hela) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330865(SRX091703) tissue: skin psoriatic involveddisease state:. (skin) | SRR207111(GSM721073) Whole cell RNA. (cell line) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR037938(GSM510476) 293Red. (cell line) | SRR033713(GSM497058) Burkitt Lymphoma (BL115). (B cell) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR330868(SRX091706) tissue: skin psoriatic involveddisease state:. (skin) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) | SRR037933(GSM510471) 293cand4_rep2. (cell line) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR330891(SRX091729) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR189782 | SRR189785 | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR038861(GSM458544) MM466. (cell line) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR330858(SRX091696) tissue: skin psoriatic involveddisease state:. (skin) | GSM450602(GSM450602) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR033731(GSM497076) h929 Cell line (h929). (B cell) | SRR330913(SRX091751) tissue: normal skindisease state: normal. (skin) | SRR343337 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................GGAGGGTTCTGTAAAAA......................................................................................................................... | 17 | 30.00 | 0.00 | 17.00 | - | - | - | 3.00 | - | 2.00 | - | - | 1.00 | - | - | 1.00 | 1.00 | 2.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ................................................................................................................GGAGGGTTCTGTAAAAAAA....................................................................................................................... | 19 | 24.00 | 0.00 | - | 1.00 | 5.00 | 4.00 | - | 1.00 | - | - | 3.00 | - | - | - | 1.00 | - | - | - | 2.00 | - | 1.00 | - | 1.00 | 1.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................GGAGGGTTCTGTAAAAAA........................................................................................................................ | 18 | 10.00 | 0.00 | 5.00 | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ................................................................................................................GGAGGGTTCTGTAAAA.......................................................................................................................... | 16 | 10.00 | 0.00 | - | - | - | - | 1.00 | - | 1.00 | - | - | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| .............................................................................................................GGGGGAGGGTTCTGTAAAAA......................................................................................................................... | 20 | 2 | 4.50 | 0.50 | - | 4.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................GGGGGAGGGTTCTGTACAA.......................................................................................................................... | 19 | 4.00 | 0.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................GGGGGAGGGTTCTGTACA........................................................................................................................... | 18 | 4.00 | 0.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| .............................................................................................................GGGGGAGGGTTCTGTACCA.......................................................................................................................... | 19 | 2.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................AAGGGGGAGAAGGTAAGGGA.................................................................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| .............................................................................................................GGGGGAGGGTTCTGTACCAA......................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................GGAGGGTTCTGTAAAAAAC....................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................AGGGGGAGGGTTCTGTAG............................................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................GGGGGAGGGTTCTGTGA............................................................................................................................ | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................AAGGGGGAGGGTTCTGTAAATTCTG...................................................................................................................... | 25 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................AATAGGAGAGGACTCTGCC.................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| ............................................................................................................................................................................................TTTAACTTCCAGTTCTAG............................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................GGGGGAGGGTTCTGTGC............................................................................................................................ | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................GGGGGAGGGTTCTGTAC............................................................................................................................ | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................GGGGGAGGGTTCTGTAAA........................................................................................................................... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................GGGGGAGGGTTCTGTAAAA.......................................................................................................................... | 19 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................GGGGAGGGTTCTGTAA............................................................................................................................ | 16 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GTAGATCTGAGTGCTCATTGTGGGTCATGGCCACTTTCTTGTATCTCAAATATCCTCTGCAATTCTGGAAGGGGGAGAAGGTAAAAATAGGAGAGGACTCTGGCTCAAAGGGGGAGGGTTCTGTAAATTGGAAGTATCACTTTAGATGGTGAAACATTTTCTTGCTAGTTATGTAATTCTGATATGCTTTTAACTTCCAGTTCCTAGGAAAGAAGTTGTTTCAACTCTCATTGGAGGAAGTATAAGGTGA .............................................................................................((((((((..((.....))..))))))))................................................................................................................................ ...............................................................64...................................................................133................................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR037941(GSM510479) 293DroshaTN. (cell line) | SRR033712(GSM497057) Burkitt Lymphoma (BL510). (B cell) | SRR207116(GSM721078) Nuclear RNA. (cell line) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR037935(GSM510473) 293cand3. (cell line) | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR037937(GSM510475) 293cand2. (cell line) | SRR033732(GSM497077) bjab cell line (bjab103). (B cell) | SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line) | DRR001485(DRX001039) "Hela long total cell fraction, LNA(+)". (hela) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330865(SRX091703) tissue: skin psoriatic involveddisease state:. (skin) | SRR207111(GSM721073) Whole cell RNA. (cell line) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR037938(GSM510476) 293Red. (cell line) | SRR033713(GSM497058) Burkitt Lymphoma (BL115). (B cell) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR330868(SRX091706) tissue: skin psoriatic involveddisease state:. (skin) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) | SRR037933(GSM510471) 293cand4_rep2. (cell line) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR330891(SRX091729) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR189782 | SRR189785 | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR038861(GSM458544) MM466. (cell line) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR330858(SRX091696) tissue: skin psoriatic involveddisease state:. (skin) | GSM450602(GSM450602) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR033731(GSM497076) h929 Cell line (h929). (B cell) | SRR330913(SRX091751) tissue: normal skindisease state: normal. (skin) | SRR343337 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................ATTGTGGGTCATGGCCATTTA..................................................................................................................................................................................................................... | 21 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................GACTCTGGCTCAAAGGC.......................................................................................................................................... | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................TGTAAATTGGAAGTATAC............................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| ..........................................................CCCCCTTCCAGAATTGC............................................................................................................................................................................... | 17 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - |
| .........................................................................................................AACCCTCCCCCTTTG.................................................................................................................................. | 15 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 |