ID: uc003ign.2_intron_5_0_chr4_129867308_r.3p
GENE: SCLT1(5)
chr4:129867258-129867507-


(2)
B-CELL
(1)
BREAST
(2)
CELL-LINE
(4)
HEART
(2)
LIVER
(1)
OTHER
(2)
UTERUS

Sense strand
TTTATATATTAGTTTTTAGCATTTTATTTTGTAAATGTGACAGAACCAGATTTAATTATTGATATGTTTCATATGTTACGGTCAGAACAAATGAACACATAATCATGGCTTTTTATTTCTTCCATTGATTTCTGTTTCTAAACTGTTTATTAAGACAGTTTCTTCTGTAATATTATATACCTAATAAGCCTTTTCTGCAGATTTACCGTGAAGGCAGAGGAAATGAGAGTGATTACAGAAAACTGGAAGA
...........................................................(((((((((((((.((((........)))).))))).))))).))).................................................................................................................................................
.......................................................56....................................................................126..........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR189782SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR343334SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR037937(GSM510475)
293cand2. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
............................................................GATATGTTTCATATGTTCCT..........................................................................................................................................................................2053.000.0052.00--------1.00-------
...........................................................TGATATGTTTCATATTAG.............................................................................................................................................................................184.000.00-3.00--1.00------------
.................................................................................TCAGAACAAATGAACTCTG......................................................................................................................................................193.000.00-------1.00------1.00-1.00
.......................................................................................................................................................................................................................AGAGGAAATGAGAGTGAAAA...............203.000.00--3.00--------------
...........................................................TGATATGTTTCATATTAC.............................................................................................................................................................................182.000.00-2.00---------------
............................................................GATATGTTTCATATGTTCCC..........................................................................................................................................................................201.000.001.00----------------
.......................................................................................................................................................................................................................AGAGGAAATGAGAGTGATT................1911.001.00----------1.00------
.......................................................................................................CATGGCTTTTTATTTCTAT................................................................................................................................191.000.00--------1.00--------
..............................................................................................................................................................................................................CGTGAAGGCAGAGGAAATGAG.......................2111.001.00------------1.00----
........................................................................................................ATGGCTTTTTATTTCTGTGT..............................................................................................................................201.000.00-----1.00-----------
................................................................................GTCAGAACAAATGAACTCTG......................................................................................................................................................201.000.00---------------1.00-
............................................................GATATGTTTCATATGTTCCTG.........................................................................................................................................................................211.000.001.00----------------

Antisense strand
TTTATATATTAGTTTTTAGCATTTTATTTTGTAAATGTGACAGAACCAGATTTAATTATTGATATGTTTCATATGTTACGGTCAGAACAAATGAACACATAATCATGGCTTTTTATTTCTTCCATTGATTTCTGTTTCTAAACTGTTTATTAAGACAGTTTCTTCTGTAATATTATATACCTAATAAGCCTTTTCTGCAGATTTACCGTGAAGGCAGAGGAAATGAGAGTGATTACAGAAAACTGGAAGA
...........................................................(((((((((((((.((((........)))).))))).))))).))).................................................................................................................................................
.......................................................56....................................................................126..........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR189782SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR343334SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR037937(GSM510475)
293cand2. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
............................................................GATATGTTTCATATGCT............................................................................................................................................................................. 173.000.003.00----------------
................................................................................................ACATAATCATGGCTTTATGG...................................................................................................................................... 201.000.00-1.00---------------
..............................................................................................................................................................TTTCTTCTGTAATATGGT.......................................................................... 181.000.00-------------1.00---
...........GTTTTTAGCATTTTACT.............................................................................................................................................................................................................................. 171.000.00---1.00-------------
......................................................................................................................................................................GTAATATTATATACCTTT.................................................................. 181.000.00-----------1.00-----
.....................................................................................................................................................................................TAATAAGCCTTTTCTGAGA.................................................. 191.000.00------1.00----------
.........................................................................................................................................CTTAATAAACAGTTTAG................................................................................................ 1720.500.50-0.50---------------