ID: uc003ifk.1_intron_7_0_chr4_128609023_f.3p
GENE: (8)
chr4:128620965-128621214+


(3)
BRAIN
(7)
CELL-LINE
(1)
CERVIX
(1)
HEART
(3)
LIVER
(1)
OTHER
(2)
SKIN

Sense strand
ATGTTAAATAAGTAAACTGTTTTACAGTGGCAAAGCTTAAAAACAATATGTTCCATTTTGAGACATTTCCTAAGTAACACAAAAGAGAAAGATACTCAATTTTTCAAGTAGTAATTAAGCACTTTTTATATGGCCATTACTAAAAAAGTAACTAATATGAGTCAAATGTTTATGTTACTCTTTTTTTTTTTTTAACATAGATGGAATTAGACATGGCATTAAGTGACTTGGAGGCTGCAGATTTTGCAGA
........................................................................((((((........(((((((.....)))))))..........((((((...(((((((.....(((((.....)))))...))))))).....)))))).)))))).......................................................................
.......................................................................72..............................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189782SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040024(GSM532909)
G613N. (cervix)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.................................................................................................................................................................................CTCTTTTTTTTTTTTTAACCCAG..................................................23143.000.0064.0060.0010.006.00-2.00--1.00----------
.................................................................................................................................................................................CTCTTTTTTTTTTTTTAACCCAT..................................................237.000.004.003.00-----------------
................................................................................................................................................................................ACTCTTTTTTTTTTTTTATAAG....................................................227.000.004.001.001.001.00---------------
..................................................................................................................................................................................TCTTTTTTTTTTTTTAACATATAAG...............................................255.000.002.002.001.00----------------
.................................................................................................................................................................................CTCTTTTTTTTTTTTTAACCAAG..................................................233.000.001.001.00-1.00---------------
.................................................................................................................................................................................CTCTTTTTTTTTTTTTAACCCCG..................................................233.000.001.00-2.00----------------
.................................................................................................................................................................................CTCTTTTTTTTTTTTTAACCCA...................................................222.000.002.00------------------
..............................................................................................................................................................................TTACTCTTTTTTTTTTTTGGTT......................................................222.000.00----1.001.00-------------
...................................................................................................................................................................................CTTTTTTTTTTTTTAACATCAAG................................................232.000.00---2.00---------------
...............................................................................................................................................................................TACTCTTTTTTTTTTTTTAAAAG....................................................232.000.001.001.00-----------------
.............................................................................................................................................................................................................................AGTGACTTGGAGGCTGCAGATA.......222.000.00------2.00------------
................................................................................................................................................................................ACTCTTTTTTTTTTTTTATATG....................................................221.000.00-1.00-----------------
...................................................................................................................................................................................CTTTTTTTTTTTTTAACATCAG.................................................221.000.00---1.00---------------
.............................................................................................................................................................................GTTACTCTTTTTTTTTTGGT.........................................................201.000.00-----1.00-------------
............................................................................................................................................................................................................................AAGTGACTTGGAGGCTGCAGATTTTG....2611.001.00-------1.00-----------
.................................................................................................................................................................................CTCTTTTTTTTTTTTTAACCTAG..................................................231.000.00--1.00----------------
.............................................................................................................................................................................GTTACTCTTTTTTTTTTTTTAAAG.....................................................241.000.00--1.00----------------
....................TTTACAGTGGCAAAGTT.....................................................................................................................................................................................................................171.000.00----------1.00--------
...................................................................................................................................................................................CTTTTTTTTTTTTTAACATAATCT...............................................241.000.00-1.00-----------------
.........................................................................................................................................................................................................TGGAATTAGACATGGCATT..............................1911.001.00---------1.00---------
....................................................................................................................................................................................TTTTTTTTTTTTTAACATATTTC...............................................231.000.00---1.00---------------
..............................................................................................................................................................................TTACTCTTTTTTTTTTTTTATAAG....................................................241.000.00-1.00-----------------
..............................................................................................................................................................................TTACTCTTTTTTTTTTTTCCG.......................................................211.000.00--1.00----------------
........................................................................................................................................................................TTTATGTTACTCTTTTCAC...............................................................191.000.00--------1.00----------
.........................................................................................................................................................................................................TGGAATTAGACATGGCATTAAGTGA........................2511.001.00------1.00------------
............................................................................ACACAAAAGAGAAAGCTTG...........................................................................................................................................................191.000.00-----------------1.00-
.............................................................................................................................................................................................................................AGTGACTTGGAGGCTGCAG..........1911.001.00-------1.00-----------
........................................................................................................................................................................................................ATGGAATTAGACATGGCATT..............................2011.001.00---------------1.00---
................................................................................................................................................................................ACTCTTTTTTTTTTTTTAACCG....................................................221.000.00--1.00----------------
.............................................................................................................................................................................................................................AGTGACTTGGAGGCTGCAGATT.......2211.001.00------1.00------------
............................................................................................................................................................................................................................AAGTGACTTGGAGGCTGCAGA.........2111.001.00----------------1.00--
................................................................................................................................TATGGCCATTACTAAAACG.......................................................................................................191.000.00-----------1.00-------
....................TTTACAGTGGCAAAGCCCTG..................................................................................................................................................................................................................201.000.00----------1.00--------
..............................................................................................................................................................................TTACTCTTTTTTTTTTTTATTT......................................................221.000.00-1.00-----------------
......................................................................................................................................................................................................AGATGGAATTAGACATGGCAT...............................2111.001.00---------1.00---------
..............................................................................................................................................................................TTACTCTTTTTTTTTTTTCGG.......................................................211.000.00----1.00--------------
..........................................................................................................................................................................................................................TTAAGTGACTTGGAGGCTGCAGATTTTGC...2911.001.00-------1.00-----------
................................................................................................................................................................................ACTCTTTTTTTTTTTTTATATT....................................................221.000.001.00------------------
..........................................................................................................................................................................................................................TTAAGTGACTTGGAGGC...............1721.001.00-------0.50----------0.50
..................................................................................................................................................................................TCTTTTTTTTTTTTTAACATATAAA...............................................251.000.00---1.00---------------
...........................................................................................................................................................................ATGTTACTCTTTTTTTTTTTCTG........................................................231.000.00----1.00--------------
.................................................................................................................................................................................CTCTTTTTTTTTTTTTAACCCGG..................................................231.000.00-1.00-----------------
.................................................................................................................................................................................CTCTTTTTTTTTTTTTAACCCG...................................................221.000.00-1.00-----------------
..............................................................................................................................................................................TTACTCTTTTTTTTTTTTTAAACG....................................................241.000.00---1.00---------------
..............................................................................................................................................................................TTACTCTTTTTTTTTTTTACG.......................................................211.000.00--1.00----------------
...................................................................................................................................................................................CTTTTTTTTTTTTTAACATACG.................................................221.000.00--1.00----------------
.................................................................................................................................................................................CTCTTTTTTTTTTTTTAACCCAA..................................................231.000.00--1.00----------------
..................................................................................................................................................................................................ACATAGATGGAATTAGACATG...................................2111.001.00-------------1.00-----
..............................................................................................................................................................................................................................GTGACTTGGAGGCTGCAGA.........1911.001.00-----------1.00-------
..............................................................................................................................................................................TTACTCTTTTTTTTTTTTTATTGG....................................................241.000.001.00------------------
...........................................................................................................................................................................................................................TAAGTGACTTGGAGGCTGCAG..........2111.001.00------------1.00------
..............................................................................................................................................................................TTACTCTTTTTTTTTTTTTAGCGT....................................................241.000.00----1.00--------------
............................................................................................................................................................................TGTTACTCTTTTTTTTTTTACTC.......................................................231.000.00--------1.00----------
..............................................................................................................................................................................TTACTCTTTTTTTTTTTTGGTA......................................................221.000.00-----1.00-------------
................................................................................................................................................................................ACTCTTTTTTTTTTTTTAACA.....................................................2150.200.200.20------------------
...................................................................................................................................................................................................................................TTGGAGGCTGCAGAT........1590.110.11-------0.11-----------

Antisense strand
ATGTTAAATAAGTAAACTGTTTTACAGTGGCAAAGCTTAAAAACAATATGTTCCATTTTGAGACATTTCCTAAGTAACACAAAAGAGAAAGATACTCAATTTTTCAAGTAGTAATTAAGCACTTTTTATATGGCCATTACTAAAAAAGTAACTAATATGAGTCAAATGTTTATGTTACTCTTTTTTTTTTTTTAACATAGATGGAATTAGACATGGCATTAAGTGACTTGGAGGCTGCAGATTTTGCAGA
........................................................................((((((........(((((((.....)))))))..........((((((...(((((((.....(((((.....)))))...))))))).....)))))).)))))).......................................................................
.......................................................................72..............................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189782SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040024(GSM532909)
G613N. (cervix)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..............................................................ACATTTCCTAAGTAAGGAC......................................................................................................................................................................... 191.000.00----1.00--------------
.......................................................TTTTGAGACATTTCCTAAAA............................................................................................................................................................................... 201.000.00--------------1.00----