ID: uc003idv.3_intron_11_0_chr4_122617780_r
GENE: (1)
chr4:122617730-122618067-


(1)
AGO2.ip
(4)
B-CELL
(10)
BREAST
(23)
CELL-LINE
(7)
CERVIX
(3)
HEART
(1)
HELA
(1)
LIVER
(2)
OTHER
(1)
RRP40.ip
(57)
SKIN
(1)
TESTES

Sense strand
CTCTCCGCCGCTCTCCCGGGGTTTCGGGGCACTTGGGTCCCACAGTCTGGGTGAGTGGTCGCAGCCCGGGGAGGGGGCTCCTTCTGGAGAGGAGAGCGTGGTCGCGGGGCACTGGATTCGCGCGGACGCTCGGCCGAGAGCTGTCCCGGTAGCTGCGAGAGGGCGGGTCGGCCCCGTGGCGGGGCCCTCCGGGCTGTCTGAGCGCCGCCGGGTCCCCGCGGACCTGCGCTTGGGGAGGGCACGAGTTGCAAATGGCGCGCTAAGCCCGAGGTTTCTTCTCTTTTGCAGTCCTGCTTCACCTTCCCCTGACCTGAGTAGTCGCCATGGCACAGGTAAGG
.........................................................................................................................................................................(((((.((((((.(((((...))))).......)))))).)))))............................................................................................................................
.....................................................................................................................................................................166.............................................214..........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR040037(GSM532922)
G243T. (cervix)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM532883(GSM532883)
G871N. (cervix)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR189782SRR029128(GSM416757)
H520. (cell line)
TAX577741(Rovira)
total RNA. (breast)
GSM339994(GSM339994)
hues6. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR343335GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR444065(SRX128913)
Sample 22cDNABarcode: AF-PP-335: ACG CTC TTC . (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR040017(GSM532902)
G645T. (cervix)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR191428(GSM715538)
160genomic small RNA (size selected RNA from . (breast)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
GSM532884(GSM532884)
G871T. (cervix)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
GSM532872(GSM532872)
G652T. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
.................................................................................................................................................................................................CTGTCTGAGCGCCGCTT................................................................................................................................17363.677.3313.3313.33-5.00-3.334.00-3.00--2.00---1.33------0.33-0.330.330.33-1.331.00-0.330.67--------------------------------0.67-0.330.330.670.330.670.67-0.330.330.670.670.67-----0.330.330.330.33--0.33--0.330.330.330.330.330.330.330.330.330.330.330.330.330.330.330.330.33---
.................................................................................................................................................................................................CTGTCTGAGCGCCGC..................................................................................................................................1537.337.331.670.67-0.67-0.33----0.33----0.67-------------0.330.33----------------------------------0.33----0.33---0.330.33------------0.330.33--0.33--------------------
................................TTGGGTCCCACAGTCTGGG...............................................................................................................................................................................................................................................................................................1915.005.00----5.00------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................GCCCCGTGGCGGGGCGCGG.....................................................................................................................................................195.000.00---------------------1.00-----1.00---------1.001.00----1.00---------------------------------------------------------------------
..........................................................................................................................................................................GCCCCGTGGCGGGGCG........................................................................................................................................................165.000.00-------1.00--1.00--------------1.00-------------1.00----------------------1.00--------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................AGTAGTCGCCATGGCACAGGTTCT.244.000.00------------2.00---2.00------------------------------------------------------------------------------------------------
............CTCCCGGGGTTTCGGGGC....................................................................................................................................................................................................................................................................................................................1813.003.00----------1.00---1.00------1.00-------------------------------------------------------------------------------------------
....CCGCCGCTCTCCCGGGGG............................................................................................................................................................................................................................................................................................................................182.000.00--1.00----1.00---------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................GCTGTCTGAGCGCCGCT.................................................................................................................................172.000.00-----1.00----------------------------1.00------------------------------------------------------------------------------
................................................................................................................................................................................................GCTGTCTGAGCGCCGCTT................................................................................................................................182.000.00-----------------1.00-----------------1.00-----------------------------------------------------------------------------
............CTCCCGGGGTTTCGGGGCACTTGGGTC...........................................................................................................................................................................................................................................................................................................2712.002.00-------------2.00---------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................CTGTCTGAGCGCCGCC.................................................................................................................................1621.501.500.50-------0.50--------------------------------------------------------------------------0.50-----------------------------
..................................................................................................................................................................................................TGTCTGAGCGCCGCC.................................................................................................................................1521.501.50--------------------------------0.50----------------------------------0.50------------0.50--------------------------------
....................................................................................................................................................................................................................................................................................................................ACCTGAGTAGTCGCCATGG...........1911.001.00------------------------------------------------1.00----------------------------------------------------------------
.................................................................................................................................................................................................CTGTCTGAGCGCCGCCA................................................................................................................................1721.001.50------------------------1.00----------------------------------------------------------------------------------------
..................................................................................TCTGGAGAGGAGAGCAAT..............................................................................................................................................................................................................................................181.000.00----------------------------------------------------------------1.00------------------------------------------------
.................................................................................................................................................CCGGTAGCTGCGAGAATT...............................................................................................................................................................................181.000.00-------------------------------1.00---------------------------------------------------------------------------------
............................................................................................................................................................................................CCGGGCTGTCTGAGC.......................................................................................................................................1511.001.00----------------------1.00------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................TCTTTTGCAGTCCTGCGGTT........................................201.000.00--------------------------------------------1.00--------------------------------------------------------------------
.............................................................................................................................................................................................CGGGCTGTCTGAGCGCGGCT.................................................................................................................................201.000.00-----------------1.00-----------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................CGCCGCCGGGTCCCCCGGG.....................................................................................................................191.000.00-----------------------1.00-----------------------------------------------------------------------------------------
................................................................................................................................................................GGGCGGGTCGGCCCCGTGGCGGGGC.........................................................................................................................................................2511.001.00------------------------------1.00----------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................TCACCTTCCCCTGACCTGAGTA.....................2211.001.00---------------------------------1.00-------------------------------------------------------------------------------
..CTCCGCCGCTCTCCCGGGG.............................................................................................................................................................................................................................................................................................................................1911.001.00--------------1.00--------------------------------------------------------------------------------------------------
.............................................................CAGCCCGGGGAGGGGGTGAG.................................................................................................................................................................................................................................................................201.000.00-----------------------------------------------------1.00-----------------------------------------------------------
...........................................................................................................................................................................................................GCCGCCGGGTCCCCGG.......................................................................................................................161.000.00---------------------------------------------------------1.00-------------------------------------------------------
.........................................................................................................................................................TGCGAGAGGGCGGGTCGGCC.....................................................................................................................................................................2011.001.00--------------------------1.00--------------------------------------------------------------------------------------
............................................................................................................................GACGCTCGGCCGAGAATTG...................................................................................................................................................................................................191.000.00------------------------------------1.00----------------------------------------------------------------------------
......................................................................................GAGAGGAGAGCGTGGTGTC.........................................................................................................................................................................................................................................191.000.00-----------------------------------------1.00-----------------------------------------------------------------------
...................................................................GGGGAGGGGGCTCCTAGGC............................................................................................................................................................................................................................................................191.000.00-------------------1.00---------------------------------------------------------------------------------------------
................................................................................................................TGGATTCGCGCGGACGCT................................................................................................................................................................................................................1811.001.00--------------------------------------------------------1.00--------------------------------------------------------
.........................................................................................................GGGGCACTGGATTCGCGCGGACGCT................................................................................................................................................................................................................2511.001.00-----------------------------------------------------------1.00-----------------------------------------------------
........................................................................................................................CGCGGACGCTCGGCCC..........................................................................................................................................................................................................161.000.00----------------------------------------1.00------------------------------------------------------------------------
...............................................................................................................................................................................................GGCTGTCTGAGCGCCGCT.................................................................................................................................181.000.00--------------------1.00--------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................ACCTTCCCCTGACCTGAGTAGTC..................2311.001.00-------------------------------------------------------------1.00---------------------------------------------------
........................................................................................................................................................................................................................................................................................................................GAGTAGTCGCCATGGCACAGG.....2111.001.00--------------------1.00--------------------------------------------------------------------------------------------
.................................................................................................................................................................................................CTGTCTGAGCGCCGCTATC..............................................................................................................................1930.677.33-------------------------------------------------------------------------0.67---------------------------------------
......................TTCGGGGCACTTGGGT............................................................................................................................................................................................................................................................................................................1620.500.50------------------------------------------------------------------0.50----------------------------------------------
...............................................................................CCTTCTGGAGAGGAGAGC.................................................................................................................................................................................................................................................1820.500.50----------------------------------------------------------------------------------0.50------------------------------
.................................................................................................................................................................................................CTGTCTGAGCGCCGCGT................................................................................................................................1730.337.33-----------0.33-----------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................CTGTCTGAGCGCCGCG.................................................................................................................................1630.337.33------------------------------------------------------------------0.33----------------------------------------------
.....CGCCGCTCTCCCGGGG.............................................................................................................................................................................................................................................................................................................................1630.330.33-------------------------------------------------------------------------------------------0.33---------------------
................................................................................................................................................................................................................................................................................................................CCTGACCTGAGTAGT...................1530.330.33-----------------------0.33-----------------------------------------------------------------------------------------
.......................TCGGGGCACTTGGGT............................................................................................................................................................................................................................................................................................................1530.330.33---------------------------0.33-------------------------------------------------------------------------------------
......................TTCGGGGCACTTGGG.............................................................................................................................................................................................................................................................................................................1540.250.25--------------------------------------------------------------------------------------------------------------0.25--

Antisense strand
CTCTCCGCCGCTCTCCCGGGGTTTCGGGGCACTTGGGTCCCACAGTCTGGGTGAGTGGTCGCAGCCCGGGGAGGGGGCTCCTTCTGGAGAGGAGAGCGTGGTCGCGGGGCACTGGATTCGCGCGGACGCTCGGCCGAGAGCTGTCCCGGTAGCTGCGAGAGGGCGGGTCGGCCCCGTGGCGGGGCCCTCCGGGCTGTCTGAGCGCCGCCGGGTCCCCGCGGACCTGCGCTTGGGGAGGGCACGAGTTGCAAATGGCGCGCTAAGCCCGAGGTTTCTTCTCTTTTGCAGTCCTGCTTCACCTTCCCCTGACCTGAGTAGTCGCCATGGCACAGGTAAGG
.........................................................................................................................................................................(((((.((((((.(((((...))))).......)))))).)))))............................................................................................................................
.....................................................................................................................................................................166.............................................214..........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR040037(GSM532922)
G243T. (cervix)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM532883(GSM532883)
G871N. (cervix)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR189782SRR029128(GSM416757)
H520. (cell line)
TAX577741(Rovira)
total RNA. (breast)
GSM339994(GSM339994)
hues6. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR343335GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR444065(SRX128913)
Sample 22cDNABarcode: AF-PP-335: ACG CTC TTC . (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR040017(GSM532902)
G645T. (cervix)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR191428(GSM715538)
160genomic small RNA (size selected RNA from . (breast)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
GSM532884(GSM532884)
G871T. (cervix)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
GSM532872(GSM532872)
G652T. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
...................................................................................................................................................................................................GTCTGAGCGCCGCCGTGG............................................................................................................................. 183.000.00---------3.00-------------------------------------------------------------------------------------------------------
........................................................................................................................................................................CGGCCCCGTGGCGGGGGGGG...................................................................................................................................................... 203.000.00--2.00----1.00---------------------------------------------------------------------------------------------------------
................................................................................................................................................................GGGCGGGTCGGCCCCCG................................................................................................................................................................. 172.000.00--2.00--------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................GGCGCGCTAAGCCCGTGGT.................................................................. 192.000.00------------------2.00----------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................CGCCGCCGGGTCCCCGCGGGGGG................................................................................................................. 232.000.00-------------------------------------------------1.00--------1.00------------------------------------------------------
.................................................................................................................................................................................GGCGGGGCCCTCCGGGCTGTCTT.......................................................................................................................................... 231.000.00-------------------------------------------------------1.00---------------------------------------------------------
....................................................................................................................................................................................................................................................................................AAGGTGAAGCAGGACTGCAAAAGAGA.................................... 2611.001.00-------------------1.00---------------------------------------------------------------------------------------------
..................................................................................................................................................................GCGGGTCGGCCCCGTGGGG............................................................................................................................................................. 191.000.00--1.00--------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................TGCTTCACCTTCCCCCGG............................. 181.000.00---------------------------------------------1.00-------------------------------------------------------------------
..............CCCGGGGTTTCGGGGGG................................................................................................................................................................................................................................................................................................................... 171.000.00-------1.00---------------------------------------------------------------------------------------------------------
................................................................................................................................................CCCGGTAGCTGCGAGCGG................................................................................................................................................................................ 181.000.00--------------------------------------------------1.00--------------------------------------------------------------
................................................................................................................................................CCCGGTAGCTGCGAGTGT................................................................................................................................................................................ 181.000.00------------------------------------------------------1.00----------------------------------------------------------
..........................................................................................................................................................................................................CGCCGCCGGGTCCCCGGGT..................................................................................................................... 191.000.00---------------------------------------------------1.00-------------------------------------------------------------
.....................................................................................................................................................................................................................................................................AAGCAGGACTGCAAAAGAGAAGAAACCTCGGGCTT.......................................... 3511.001.00------------------------------------------------------------1.00----------------------------------------------------
...................................................................................................................................................................CGGGTCGGCCCCGTGGGGA............................................................................................................................................................ 191.000.00--1.00--------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................GCAGGACTGCAAAAGAGAAGAA............................................ 2211.001.00-----------------------------------------------1.00-----------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................CTGCTTCACCTTCCCCAG.............................. 181.000.00------------------------------------------1.00----------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................ACTGCAAAAGAGAAGAAA................................................. 1811.001.00----------------------------------------------1.00------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................GTCCTGCTTCACCTTATGA................................ 191.000.00---------------------------------------------------------------1.00-------------------------------------------------
................................................................................................................................................................................................................................................................................................CAGGTCAGGGGAAGGTGAAGCAGGA......................... 2511.001.00----------------------------------------------------1.00------------------------------------------------------------
...........................................................................................................................................................................................................CGCGGGGACCCGGCGGC...................................................................................................................... 1740.750.75--0.25-------0.25----------------------------------------------------------------------------------------------------0.25-
......ACCCCGGGAGAGCGGC............................................................................................................................................................................................................................................................................................................................ 1620.500.50--------------------------------------------------------------------0.50--------------------------------------------
..........................................................................................................................................................................................................CGCGGGGACCCGGCGGCG...................................................................................................................... 1820.500.50---------------------------------------------------------------------------------0.50-------------------------------
...................................................................................................................................GGACAGCTCTCGGCC................................................................................................................................................................................................ 1530.330.33-------------------------------------------------------------------------------0.33---------------------------------
.............................................................................................................................................................................................................CCGCGGGGACCCGGCG..................................................................................................................... 1640.250.25----------------------0.25------------------------------------------------------------------------------------------
....................................................................................................................................GGGACAGCTCTCGGC............................................................................................................................................................................................... 1550.200.20-------------------------------------------------------------------------------0.20---------------------------------
............................................................................................................................................................................................................CGCGGGGACCCGGCGG...................................................................................................................... 1670.140.14----------------------------------------------------------------------------------------------------------------0.14
...........................................................................................................................................................................................................CGGGGACCCGGCGGC........................................................................................................................ 1580.120.12----------------------0.12------------------------------------------------------------------------------------------