ID: uc003ice.2_intron_3_0_chr4_119599294_r.3p
GENE: (2)
chr4:119599244-119599493-


(2)
AGO2.ip
(2)
BRAIN
(3)
BREAST
(11)
CELL-LINE
(1)
LIVER
(2)
OTHER
(2)
SKIN

Sense strand
CTTTTCTTTCTTCTTTTTTTTTTTCCTCAAAAAGAATCTCTTGCTCTGCTGCCCAGGCTGGAGTACAGTGGTGTGATCACAGCTCACTATAATCTCAAACTCCTGGGCTCAAGTAATCCTCTCACTTCAGCCTCCCAAGTAGCTAGGACAACAGGTGCACATCACCACACCCAGCTAATTTTTTATTTTATTTTTTCTAGAGACAGGGGTCTCACTATGTGATGCAGGATGATCTCAAACTCCCTGGCCT
......................................................((((((((((..((.((.........((((((.................))))))........)).)).)))))))))).....................................................................................................................
..................................................51.................................................................................134..................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR189786TAX577744(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
.........................................................CTGGAGTACAGTGGTGTAGGG............................................................................................................................................................................2115.000.00----15.00----------------
.TTTTCTTTCTTCTTTTTTTTTTTCG................................................................................................................................................................................................................................2510.000.00--4.004.00-1.001.00--------------
...................................................................................................................ATCCTCTCACTTCAGCCTGAGT.................................................................................................................223.000.003.00--------------------
.....................................................CAGGCTGGAGTACAGTGGTGTTAA.............................................................................................................................................................................243.000.00--------3.00------------
..........TTCTTTTTTTTTTTCCTCAAATG.........................................................................................................................................................................................................................233.000.00--1.001.00-1.00---------------
.TTTTCTTTCTTCTTTTTTTTTTCTCG...............................................................................................................................................................................................................................262.000.001.001.00-------------------
.TTTTCTTTCTTCTTTTTTTTTTTAGCC..............................................................................................................................................................................................................................272.000.002.00--------------------
.TTTTCTTTCTTCTTTTTTTTTCTTG................................................................................................................................................................................................................................252.000.00--2.00------------------
..................................................................................................................................................................................TTTTTTATTTTATTTTTTCTCAG.................................................232.000.00---2.00-----------------
....TCTTTCTTCTTTTTTTTTTTATAG..............................................................................................................................................................................................................................242.000.00---2.00-----------------
..............................................................................................................................................................................CTAATTTTTTATTTTATTTTTTTTG...................................................252.000.00---2.00-----------------
.TTTTCTTTCTTCTTTTTTTTCTCT.................................................................................................................................................................................................................................241.000.00-1.00-------------------
.................................................................................................................................................................................................TTTCTAGAGACAGGGGCAT......................................191.000.00-1.00-------------------
....TCTTTCTTCTTTTTTTTTTTCCTAG.............................................................................................................................................................................................................................251.000.00-----1.00---------------
.........................................................................................................................TCACTTCAGCCTCCCAAGTAGCTAGGACAACAG................................................................................................3321.001.001.00--------------------
.TTTTCTTTCTTCTTTTTTTTTCTCG................................................................................................................................................................................................................................251.000.00---1.00-----------------
..........TTCTTTTTTTTTTTCCTCAGGG..........................................................................................................................................................................................................................221.000.00-1.00-------------------
.TTTTCTTTCTTCTTTTGCAG.....................................................................................................................................................................................................................................201.000.001.00--------------------
....................................................................................................................................................................................TTTTATTTTATTTTTTCTAGGGA...............................................231.000.00--1.00------------------
.......TTCTTCTTTTTTTTTTTCGCC..............................................................................................................................................................................................................................211.000.001.00--------------------
.....CTTTCTTCTTTTTTTTTTTCG................................................................................................................................................................................................................................211.000.00--1.00------------------
............................................TCTGCTGCCCAGGCTGGAGTACAGCGG...................................................................................................................................................................................271.000.001.00--------------------
.............................................................................................................................................................................................ATTTTTTCTAGAGACAGGGCCTC......................................231.000.00-1.00-------------------
..............................................................................................................................................................................CTAATTTTTTATTTTATTTTTTCAG...................................................251.000.00--1.00------------------
........TCTTCTTTTTTTTTTTCGGCT.............................................................................................................................................................................................................................211.000.001.00--------------------
..TTTCTTTCTTCTTTTTTTTTTGGCT...............................................................................................................................................................................................................................251.000.001.00--------------------
......TTTCTTCTTTTTTTTTTTCATCT.............................................................................................................................................................................................................................231.000.001.00--------------------
...TTCTTTCTTCTTTTTTTTAACG.................................................................................................................................................................................................................................221.000.00--1.00------------------
......................................................AGGCTGGAGTACAGTGGTGTGATGCG..........................................................................................................................................................................261.000.00-1.00-------------------
...........TCTTTTTTTTTTTCCTCAAATG.........................................................................................................................................................................................................................221.000.00---1.00-----------------
.....CTTTCTTCTTTTTTTTACGG.................................................................................................................................................................................................................................201.000.001.00--------------------
...TTCTTTCTTCTTTTTTTTTTTCACTG.............................................................................................................................................................................................................................261.000.00-1.00-------------------
..............................................TGCTGCCCAGGCTGGAGCGCC.......................................................................................................................................................................................211.000.00-1.00-------------------
.....CTTTCTTCTTTTTTTTTTGTAG...............................................................................................................................................................................................................................221.000.00-1.00-------------------
.....CTTTCTTCTTTTTTTTTTTGGTT..............................................................................................................................................................................................................................231.000.001.00--------------------
.................................................................................................................................................................................ATTTTTTATTTTATTTTTTCAGAG.................................................241.000.00-1.00-------------------
..........TTCTTTTTTTTTTTCCTCATG...........................................................................................................................................................................................................................211.000.00---1.00-----------------
.......TTCTTCTTTTTTTTTTTCCTCATG...........................................................................................................................................................................................................................241.000.00--1.00------------------
...............................................................TACAGTGGTGTGATCACTGAA......................................................................................................................................................................211.000.00----------------1.00----
........TCTTCTTTTTTTTTTTCGGTG.............................................................................................................................................................................................................................211.000.001.00--------------------
..................................................................................................................................................................................TTTTTTATTTTATTTTTTCTTCTT................................................241.000.00-------1.00-------------
....................................................................................................................................................................................TTTTATTTTATTTTTTCTATTTG...............................................231.000.00---1.00-----------------
............................................TCTGCTGCCCAGGCTGGAGCGCC.......................................................................................................................................................................................231.000.00-1.00-------------------
..TTTCTTTCTTCTTTTTTAAAG...................................................................................................................................................................................................................................211.000.00--1.00------------------
.TTTTCTTTCTTCTTTTTTTTCTCG.................................................................................................................................................................................................................................241.000.00-1.00-------------------
.......TTCTTCTTTTTTTTTTTCGTTT.............................................................................................................................................................................................................................221.000.00-----1.00---------------
.......TTCTTCTTTTTTTTTTTCGCAG.............................................................................................................................................................................................................................221.000.001.00--------------------
...........TCTTTTTTTTTTTCCTCTAAG..........................................................................................................................................................................................................................211.000.00---1.00-----------------
.TTTTCTTTCTTCTTTTTTTTTTGC.................................................................................................................................................................................................................................241.000.001.00--------------------
.................................................TGCCCAGGCTGGAGTACAGGCG...................................................................................................................................................................................221.000.001.00--------------------
......TTTCTTCTTTTTTTTTTTCCTCTTTC..........................................................................................................................................................................................................................261.000.00---1.00-----------------
...............................................................TACAGTGGTGTGATCACTGA.......................................................................................................................................................................201.000.00-----------1.00---------
....TCTTTCTTCTTTTTTTTTACT.................................................................................................................................................................................................................................211.000.00-1.00-------------------
...............................................................................................................................................................................TAATTTTTTATTTTATTTGTCG.....................................................221.000.00-----1.00---------------
..............................................TGCTGCCCAGGCTGGAGCGG........................................................................................................................................................................................201.000.00-1.00-------------------
.TTTTCTTTCTTCTTTTTTTTTTTAATG..............................................................................................................................................................................................................................271.000.00--1.00------------------
...............................................................................................................................................................CATCACCACACCCAGCTTTTG......................................................................211.000.00--1.00------------------
................................................................................................................................................................................................TTTTCTAGAGACAGGGGCTC......................................201.000.00-1.00-------------------
.........CTTCTTTTTTTTTTTCCTCCATT..........................................................................................................................................................................................................................231.000.00-------1.00-------------
.................................................................................................................................................................................ATTTTTTATTTTATTTTTTCTCGAG................................................251.000.001.00--------------------
.........................................TGCTCTGCTGCCCAGGCTGGGGTC.........................................................................................................................................................................................241.000.001.00--------------------
.........CTTCTTTTTTTTTTTCCTCTGTT..........................................................................................................................................................................................................................231.000.001.00--------------------
.TTTTCTTTCTTCTTTTTTTTTTTCGAG..............................................................................................................................................................................................................................271.000.001.00--------------------
......................................................................................................CTGGGCTCAAGTAATCC...................................................................................................................................1701.001.00---------1.00-----------
..............................................................................................................................................................................................TTTTTTCTAGAGACAGGGGTCCACC...................................251.000.00-1.00-------------------
.TTTTCTTTCTTCTTTTTTTTTTTCACTG.............................................................................................................................................................................................................................281.000.00-----1.00---------------
.TTTTCTTTCTTCTTTTTTTTTCCTC................................................................................................................................................................................................................................251.000.001.00--------------------
..TTTCTTTCTTCTTTTTTTTTTTCACTG.............................................................................................................................................................................................................................271.000.00-----1.00---------------
.....................................................CAGGCTGGAGTACAGTGGTTTC...............................................................................................................................................................................221.000.00---------------1.00-----
.................................................................................................................................................................................ATTTTTTATTTTATTTTTTCAGGC.................................................241.000.001.00--------------------
....TCTTTCTTCTTTTTTTTTTTCCGTT.............................................................................................................................................................................................................................251.000.00-1.00-------------------
.TTTTCTTTCTTCTTTTTTAAAG...................................................................................................................................................................................................................................221.000.00------1.00--------------
.TTTTCTTTCTTCTTTTTTTTTCAGG................................................................................................................................................................................................................................251.000.001.00--------------------
.....................................................CAGGCTGGAGTACAGTGGTGTAGGG............................................................................................................................................................................251.000.00----1.00----------------
.TTTTCTTTCTTCTTTTTTTTAACC.................................................................................................................................................................................................................................241.000.001.00--------------------
..............................................TGCTGCCCAGGCTGGAGTACACCAG...................................................................................................................................................................................251.000.00-1.00-------------------
.....................................................................................................................................................................................TTTATTTTATTTTTTCTAGTTG...............................................221.000.00---1.00-----------------
.TTTTCTTTCTTCTTTTTTTTTTTGGAG..............................................................................................................................................................................................................................271.000.00-1.00-------------------
..................................................................................................ACTCCTGGGCTCAAGTACCCT...................................................................................................................................211.000.00-1.00-------------------
...............................................................................................................................................................CATCACCACACCCAGCTTCG.......................................................................201.000.00-------------1.00-------
........................................TTGCTCTGCTGCCCAGGCTGGATTTT........................................................................................................................................................................................261.000.001.00--------------------
................................................................................................................................................................................AATTTTTTATTTTATTTTCAG.....................................................211.000.00------1.00--------------
.............................................CTGCTGCCCAGGCTGGAGTACAGTGGTGGG...............................................................................................................................................................................301.000.001.00--------------------
.............................................................................................CTCAAACTCCTGGGCTCAAGTAATC....................................................................................................................................2501.001.00--------------1.00------
...........................................................GGAGTACAGTGGTGTAGGG............................................................................................................................................................................191.000.00----1.00----------------
...............................................................................................................................................................................................................................GCAGGATGATCTCAAAGC.........181.000.00-----------------1.00---
..............................................................................................................................................................................CTAATTTTTTATTTTATTTTTTAG....................................................241.000.00--1.00------------------
..TTTCTTTCTTCTTTTTTTTTTGTA................................................................................................................................................................................................................................241.000.00-1.00-------------------
......................................TCTTGCTCTGCTGCCCAGGCGGTG............................................................................................................................................................................................241.000.001.00--------------------
...TTCTTTCTTCTTTTTTTTTTTCGGTC.............................................................................................................................................................................................................................261.000.001.00--------------------
.TTTTCTTTCTTCTTTTTTTTTTTCAG...............................................................................................................................................................................................................................261.000.00---1.00-----------------
...TTCTTTCTTCTTTTTTATAG...................................................................................................................................................................................................................................201.000.00--1.00------------------
...TTCTTTCTTCTTTTTTTTTTTCAAG..............................................................................................................................................................................................................................251.000.00--1.00------------------
.......TTCTTCTTTTTTTTTTTCCTACAG...........................................................................................................................................................................................................................241.000.00---1.00-----------------
....TCTTTCTTCTTTTTTTTTTTGGCC..............................................................................................................................................................................................................................241.000.001.00--------------------
............................................................................................................................................AGCTAGGACAACAGGTGCACC.........................................................................................211.000.00-1.00-------------------
...TTCTTTCTTCTTTTTTTTTTTAC................................................................................................................................................................................................................................231.000.00-1.00-------------------
..TTTCTTTCTTCTTTTTTTTTACCC................................................................................................................................................................................................................................241.000.00-1.00-------------------
...............................................................................................................................................................................................TTTTTCTAGAGACAGGGGC........................................191.000.00-1.00-------------------
.....CTTTCTTCTTTTTTTTTTTACG...............................................................................................................................................................................................................................221.000.00-------1.00-------------
..........................................GCTCTGCTGCCCAGGCTGGAGAGAG.......................................................................................................................................................................................251.000.00-1.00-------------------
.............................................CTGCTGCCCAGGCTGGAGTACAGCGGC..................................................................................................................................................................................271.000.001.00--------------------
.....CTTTCTTCTTTTTTTTTTTCAAT..............................................................................................................................................................................................................................231.000.00------1.00--------------
.TTTTCTTTCTTCTTTTTTTTTTCTCC...............................................................................................................................................................................................................................261.000.00--1.00------------------
..TTTCTTTCTTCTTTTTTTTTTGCCC...............................................................................................................................................................................................................................251.000.001.00--------------------
..TTTCTTTCTTCTTTTTTTTTTTGTTG..............................................................................................................................................................................................................................261.000.00-1.00-------------------
.........................................TGCTCTGCTGCCCAGGCTGGAGTACAGTGGTG.................................................................................................................................................................................3230.330.330.33--------------------
..TTTCTTTCTTCTTTTTTTTTTTCC................................................................................................................................................................................................................................2480.120.120.12--------------------
....................................................................................................................TCCTCTCACTTCAGCCTCCCAAGTAGCTAGGAC.....................................................................................................3380.120.120.12--------------------

Antisense strand
CTTTTCTTTCTTCTTTTTTTTTTTCCTCAAAAAGAATCTCTTGCTCTGCTGCCCAGGCTGGAGTACAGTGGTGTGATCACAGCTCACTATAATCTCAAACTCCTGGGCTCAAGTAATCCTCTCACTTCAGCCTCCCAAGTAGCTAGGACAACAGGTGCACATCACCACACCCAGCTAATTTTTTATTTTATTTTTTCTAGAGACAGGGGTCTCACTATGTGATGCAGGATGATCTCAAACTCCCTGGCCT
......................................................((((((((((..((.((.........((((((.................))))))........)).)).)))))))))).....................................................................................................................
..................................................51.................................................................................134..................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR189786TAX577744(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
.................................................................................................AACTCCTGGGCTCAAGTAATCCTCTCCAG............................................................................................................................ 292.000.002.00--------------------
..................................................................................................ACTCCTGGGCTCAAGTAATCCTCTCC.............................................................................................................................. 262.000.00-2.00-------------------
............................................................................................................................CTTCAGCCTCCCAAGTAGCGCGG....................................................................................................... 231.000.00----------1.00----------
.....................................................................................................................................................................................TTTATTTTATTTTTTCTAGAAA............................................... 221.000.00------------1.00--------
....................................................................................................................TCCTCTCACTTCAGCCTCCCAAGTAGCTACTGC..................................................................................................... 331.000.00-1.00-------------------
......................................................................................................................................................................................................AGAGACAGGGGTCTCACTATGTCCC........................... 251.000.001.00--------------------
.......................................................GGCTGGAGTACAGTGGTGTGATCAGGGC....................................................................................................................................................................... 281.000.001.00--------------------
............................................................................................................................................................GCACATCACCACACCCAGCTAATCGT.................................................................... 261.000.00-1.00-------------------
....................................................................................................................TCCTCTCACTTCAGCCTCCCACCGC............................................................................................................. 251.000.001.00--------------------
..................................................................................................GAGGATTACTTGAGCCCAGGAGT................................................................................................................................. 2301.001.00---------1.00-----------
.................................................................................GCTCACTATAATCTCAAACTCCTGGGCAT............................................................................................................................................ 291.000.00-------1.00-------------
.............................................CTGCTGCCCAGGCTGGAGTACAGTCGAG................................................................................................................................................................................. 281.000.001.00--------------------
.......................................................GGCTGGAGTACAGTGGTGTGATGAG.......................................................................................................................................................................... 251.000.00-1.00-------------------
.............................................CACACCACTGTACTCCAGCCTGGGCAGCAG............................................................................................................................................................................... 3090.220.22------------------0.22--
..................................................................................AGCCCAGGAGTTTGAGATTATAGTGAG............................................................................................................................................. 2760.170.17-------------------0.17-
................................................................................................................TGGGAGGCTGAAGTGAGAGGATTAC................................................................................................................. 2560.170.17--------------------0.17