| (1) AGO2.ip | (1) BREAST | (7) CELL-LINE | (1) FIBROBLAST | (3) HEART | (1) HELA | (1) LIVER | (1) OTHER | (2) SKIN | (1) XRN.ip |
| TCGAACATTTTTAAGGTGATTAAAACATGTGATGGGCTGGGCGAACATAGCTCTAAACTGCGTCCCCAAGGTAGGAGAAAGAACAGATACTTATCCTCTGAAGTCATGTCACTGAACTAAGTTGCTTGTGTTAAATGTTTTGTGGTTCCCTGAACCAAGAGACAGAAGTTCTATACACAGTGTTTATTCAATTGTCACAGATATGGTAAACAAGCATCTGCCAACCATTTTGAAGAAAGCACAGGGCCCA .......................................................................................................................................((((((.((((((...)))))).)))))).....(((....(((((.........)))))...)))................................................. .......................................................................................................................................136...................................................................206.......................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR390723(GSM850202) total small RNA. (cell line) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR189787 | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR330899(SRX091737) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR029130(GSM416759) DLD2. (cell line) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................AGGAGAAAGAACAGA................................................................................................................................................................... | 15 | 0 | 52.00 | 52.00 | 52.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TGTGGTTCCCTGAACTCTG........................................................................................... | 19 | 6.00 | 0.00 | - | 2.00 | - | 2.00 | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ..............................................................................................................................................................................................................................AACCATTTTGAAGAATGGG......... | 19 | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................................................TATGGTAAACAAGCATCTGC............................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................ATTCAATTGTCACAGAG................................................ | 17 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................TTGCTTGTGTTAAATGTAACC............................................................................................................ | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| ........................................................................AGGAGAAAGAACAGATAC................................................................................................................................................................ | 18 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 |
| TCGAACATTTTTAAGGTGATTAAAACATGTGATGGGCTGGGCGAACATAGCTCTAAACTGCGTCCCCAAGGTAGGAGAAAGAACAGATACTTATCCTCTGAAGTCATGTCACTGAACTAAGTTGCTTGTGTTAAATGTTTTGTGGTTCCCTGAACCAAGAGACAGAAGTTCTATACACAGTGTTTATTCAATTGTCACAGATATGGTAAACAAGCATCTGCCAACCATTTTGAAGAAAGCACAGGGCCCA .......................................................................................................................................((((((.((((((...)))))).)))))).....(((....(((((.........)))))...)))................................................. .......................................................................................................................................136...................................................................206.......................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR390723(GSM850202) total small RNA. (cell line) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR189787 | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR330899(SRX091737) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR029130(GSM416759) DLD2. (cell line) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................................................................................TTCAATTGTCACAGAGGG.............................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ........................................................................AGGAGAAAGAACAGAGCTT............................................................................................................................................................... | 19 | 0 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...........................................................................AGAAAGAACAGATACTAG............................................................................................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................TTGTCACAGATATGGTCGGA....................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................ATGTTTTGTGGTTCCCTGACGG.............................................................................................. | 22 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................ACTTCAGAGGATAAGTA.................................................................................................................................................. | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| ..............................................................................................................................................TTGGTTCAGGGAACCA............................................................................................ | 16 | 6 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - |
| ..................................................................................................................................................................TGTATAGAACTTCTG......................................................................... | 15 | 8 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - | - |