ID: uc003hwg.2_intron_5_0_chr4_103579058_r.5p
GENE: (11)
chr4:103585642-103585891-


(3)
AGO2.ip 		(8)
B-CELL 		(2)
BREAST 		(22)
CELL-LINE 		(1)
CERVIX 		(1)
FIBROBLAST 		(1)
HEART 		(1)
HELA 		(1)
KIDNEY 		(2)
LIVER 		(2)
OTHER 		(10)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
AGGACTATGTGACACTCTATGTGAAAAACATCAGAGAGCTCGTACTGGCAGTAAGTAATGATTTTTAATGCAGTAGAATTTAAGAATGTATCTTTAGGGCTGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGATCACAAGGTCAGGAGATCGAGACCACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCTGGGCGCGGTGGCGGGCGCCTGTAGT
............................................................................................................((((.((.(((((((..((((((....)))))).......))))))))))))).........................................................................................
.........................................................................................90.......................................................................163.....................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR189782SRR038855(GSM458538)
D10. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR040014(GSM532899)
G623N. (cervix)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
........................................................................................................................................TGGGAGGCTGAGGCGGGCGGGGC...........................................................................................239.000.007.002.00------------------------------------------------------
.......................................................................................................................................TTGGGAGGCTGAGGCGGGCGGGGC...........................................................................................247.000.007.00-------------------------------------------------------
..............................................................................................TAGGGCTGGGCGTGGTGGGTA.......................................................................................................................................216.000.00--------------------1.00-1.00---------1.00----1.00-----1.001.00-----------
....................................................................................................................................ACTTTGGGAGGCTGAGGCGGGCGGGGC...........................................................................................275.000.003.002.00------------------------------------------------------
......................................................................................................................................TTTGGGAGGCTGAGGCGGGCGGGGC...........................................................................................255.000.004.001.00------------------------------------------------------
.........................AAACATCAGAGAGCTCGTACTGGCAG.......................................................................................................................................................................................................2615.005.00---5.00----------------------------------------------------
....................................................................................................................................ACTTTGGGAGGCTGAGGCGGGCGGGCC...........................................................................................273.000.003.00-------------------------------------------------------
.........................................................................................................................................................................................................................................TGGCGGGCGCCTGTAGGC183.000.00----2.00-----1.00---------------------------------------------
........................................................................................................................................................................GGAGATCGAGACCACGGAA...............................................................193.000.00-------------1.00--2.00---------------------------------------
.............................................................................................................................................................................................................................AGCTGGGCGCGGTGGCGGGCGCCAG....252.000.002.00-------------------------------------------------------
..........................................................................................................................................................................................................................ATTAGCTGGGCGCGGTGGCGCACC........242.000.002.00-------------------------------------------------------
.................................................................................................................................AGCACTTTGGGAGGCTGAGGCGGGCGGGGC...........................................................................................302.000.002.00-------------------------------------------------------
.......................................................................................................................................TTGGGAGGCTGAGGCGGGCGGGGCA..........................................................................................252.000.001.00-------1.00-----------------------------------------------
..........................................................................................................................................................................................................................ATTAGCTGGGCGCGGTGGGAC...........212.000.00-2.00------------------------------------------------------
...........................................................................................................................................GAGGCTGAGGCGGGCGGGTA...........................................................................................202.000.00-----------1.00-------------1.00------------------------------
.............................ATCAGAGAGCTCGTACTGG..........................................................................................................................................................................................................1912.002.00-------------------1.00-1.00----------------------------------
..................ATGTGAAAAACATCAGAGAGCTCGTACTGGC.........................................................................................................................................................................................................3112.002.00--2.00-----------------------------------------------------
...........................ACATCAGAGAGCTCGTACTGGCAGGAG....................................................................................................................................................................................................272.000.00------2.00-------------------------------------------------
........................................................................................................................................TGGGAGGCTGAGGCGGGCGGGGCA..........................................................................................241.000.001.00-------------------------------------------------------
........................................................................................................................................TGGGAGGCTGAGGCGGGCGGGTA...........................................................................................231.000.00------------------------------------1.00-------------------
.............................................................................................................................................................................................................................AGCTGGGCGCGGTGGCGGGCGGCCG....251.000.00-1.00------------------------------------------------------
......................................................................................................................................................................CAGGAGATCGAGACCACGGTGAAACCCCGA......................................................301.000.00-----1.00--------------------------------------------------
...................................................................................................................................CACTTTGGGAGGCTGAGGCGGGCGGGGC...........................................................................................281.000.001.00-------------------------------------------------------
.....................TGAAAAACATCAGAGAGCTCGTACTGGCAGGAG....................................................................................................................................................................................................331.000.00--1.00-----------------------------------------------------
....................................................................................................................................ACTTTGGGAGGCTGAGGCGGGCGGTCC...........................................................................................271.000.001.00-------------------------------------------------------
.............................................................................................................................................................................TCGAGACCACGGTGAAACCCCGTTAT...................................................261.000.00---------------------------------------------1.00----------
...............................................................................................AGGGCTGGGCGTGGTGGCAAG......................................................................................................................................211.000.00-----------1.00--------------------------------------------
.....................................................................................................................................CTTTGGGAGGCTGAGGCGGGCGGGAA...........................................................................................261.000.00---------------1.00----------------------------------------
...........................................................................................................................................GAGGCTGAGGCGGGCGGGTAG..........................................................................................211.000.00--------1.00-----------------------------------------------
........................AAAACATCAGAGAGCTCGTACTGGCAG.......................................................................................................................................................................................................2711.001.00--1.00-----------------------------------------------------
.................TATGTGAAAAACATCAGAG......................................................................................................................................................................................................................1911.001.00--------------------------1.00-----------------------------
......................................................................CAGTAGAATTTAAGATT...................................................................................................................................................................171.000.00-------------------------------------------------1.00------
.....................................................................................................................................................................TCAGGAGATCGAGACCACG..................................................................1901.001.00-------1.00------------------------------------------------
.................................................................TAATGCAGTAGAATTTACA......................................................................................................................................................................191.000.00-------------------------------1.00------------------------
..........................................................................................................................................................................................................................ATTAGCTGGGCGCGGCATG.............191.000.00-1.00------------------------------------------------------
........................................................................................................................................TGGGAGGCTGAGGCGGGCGGAGCCC.........................................................................................251.000.001.00-------------------------------------------------------
.........................................................................................................................................GGGAGGCTGAGGCGGGCGGGAC...........................................................................................221.000.00-1.00------------------------------------------------------
........................................................................................................................................................................GGAGATCGAGACCACGGTGAATGGC.........................................................251.000.00------1.00-------------------------------------------------
........................................................................................................................................TGGGAGGCTGAGGCGGGCGGCCGC..........................................................................................241.000.00-1.00------------------------------------------------------
........................................................................................................................................TGGGAGGCTGAGGCGGGCGGGGCT..........................................................................................241.000.00-1.00------------------------------------------------------
.......................................................................................................................................................................AGGAGATCGAGACCACGGTGAAACGCG........................................................271.000.00---------------------------------1.00----------------------
...............................................................................................................................CCAGCACTTTGGGAGGCTGAGGCGGGCGGGGC...........................................................................................321.000.00-1.00------------------------------------------------------
.............................................................................................................................................................................................................................AGCTGGGCGCGGTGGCGGGCGGC......231.000.00-1.00------------------------------------------------------
................................................................................................................................................................CAAGGTCAGGAGATCTCTG.......................................................................191.000.00----------------------------------------------1.00---------
...............................................................................................AGGGCTGGGCGTGGTGGGTAA......................................................................................................................................211.000.00--------------------------------------------------1.00-----
................................AGAGAGCTCGTACTGGCA........................................................................................................................................................................................................1811.001.00-----------------------------------------1.00--------------
.......................................................................................................................................TTGGGAGGCTGAGGCGGGCGGGAC...........................................................................................241.000.001.00-------------------------------------------------------
........................................................................................................................................TGGGAGGCTGAGGCGGGCGGGCCA..........................................................................................241.000.001.00-------------------------------------------------------
............................................................................................................................................AGGCTGAGGCGGGCGGGTA...........................................................................................191.000.00------------------------------------------------1.00-------
.............................................................................................................................................................................................................................AGCTGGGCGCGGTGGCGGGGGGC......231.000.00-1.00------------------------------------------------------
...............................................................................................................................CCAGCACTTTGGGAGGCTGAGGCGCCGC...............................................................................................281.000.00------------1.00-------------------------------------------
.............................................................................................................................................................................................................................AGCTGGGCGCGGTGGCGGGCGCG......231.000.001.00-------------------------------------------------------
............................................................................................................................................AGGCTGAGGCGGGCGGGACA..........................................................................................201.000.00-1.00------------------------------------------------------
........................................................................................................................................TGGGAGGCTGAGGCGGGCGGAGCGC.........................................................................................251.000.00------------------1.00-------------------------------------
.......................................................................................................................................................................AGGAGATCGAGACCACGGTGAATGGC.........................................................261.000.00-----1.00--------------------------------------------------
.......................................................................................................................................................................AGGAGATCGAGACCACGGTGAAACCCC........................................................2701.001.00----------------------------------------------------1.00---
..............................................................................................TAGGGCTGGGCGTGGTGGGTAG......................................................................................................................................221.000.00----------------------------------1.00---------------------
........................................................................................................................................TGGGAGGCTGAGGCGGGCGGCGTA..........................................................................................241.000.00-----------------1.00--------------------------------------
........................................................................................................................................................................................................................AAATTAGCTGGGCGCGGTGAGGC...........231.000.00-1.00------------------------------------------------------
.................................GAGAGCTCGTACTGGCA........................................................................................................................................................................................................1711.001.00-----------------------1.00--------------------------------
...................................................................................................................................CACTTTGGGAGGCTGAGGCGGGCGGGGTT..........................................................................................291.000.00---------------------------1.00----------------------------
.............................................................................................................................................................................................................................AGCTGGGCGCGGTGGCGGGCGCCCGC...261.000.001.00-------------------------------------------------------
.............................................................................................................................................GGCTGAGGCGGGCGGGGCA..........................................................................................191.000.00--1.00-----------------------------------------------------
........................................................................................................................................TGGGAGGCTGAGGCGGGCGGGGCC..........................................................................................241.000.001.00-------------------------------------------------------
........................................................................................................................................TGGGAGGCTGAGGCGGGCGGGGGA..........................................................................................241.000.00-1.00------------------------------------------------------
.............................................................................................................................................................................................................................AGCTGGGCGCGGTGGCGGGCAAC......231.000.00-1.00------------------------------------------------------
..................................................................................................................................................AGGCGGGCGGATCACAAGGTCAGGCTT.............................................................................271.000.001.00-------------------------------------------------------
............................................................................................................................................AGGCTGAGGCGGGCGGATCACA........................................................................................2201.001.00-------1.00------------------------------------------------
....................................................................................................................................ACTTTGGGAGGCTGAGGCGGGCGGGATT..........................................................................................281.000.00----1.00---------------------------------------------------
....................................................................................................................................ACTTTGGGAGGCTGAGGCGGGCGGGAC...........................................................................................271.000.001.00-------------------------------------------------------
.......................................................................................................................................TTGGGAGGCTGAGGCGGGCGGGCCC..........................................................................................251.000.001.00-------------------------------------------------------
.........................................................................................................................................................................................................................AATTAGCTGGGCGCGGTGGCGGGCGGC......271.000.001.00-------------------------------------------------------
.........................................................................................................................................GGGAGGCTGAGGCGGGCGGGTTT..........................................................................................231.000.00-----------------1.00--------------------------------------
....................................................................................................................................ACTTTGGGAGGCTGAGGCGGGCGGGCAC..........................................................................................281.000.001.00-------------------------------------------------------
..........................................................................................................................................................................................................................ATTAGCTGGGCGCGGTGGCGGGCC........241.000.00-1.00------------------------------------------------------
......................................................................................................................................TTTGGGAGGCTGAGGCGGGCGGGAA...........................................................................................251.000.00-----------------------------------------------1.00--------
......................................................................................................................................TTTGGGAGGCTGAGGCGGGCGGCCCC..........................................................................................261.000.00-1.00------------------------------------------------------
........................................................................................................................................TGGGAGGCTGAGGCGGGCGGGGTT..........................................................................................241.000.00-----------------------------------------------------1.00--
.............................................................................................................................................................................................................................AGCTGGGCGCGGTGGCGGGCGGGTC....251.000.00-1.00------------------------------------------------------
.............................................................................................................................................................................................................................AGCTGGGCGCGGTGGCGGGCGCCGG....251.000.001.00-------------------------------------------------------
.......................................................................................................................................TTGGGAGGCTGAGGCGGGCGGCCC...........................................................................................241.000.001.00-------------------------------------------------------
........................................................................................................................................TGGGAGGCTGAGGCGGGCGGGAA...........................................................................................231.000.001.00-------------------------------------------------------
.....................TGAAAAACATCAGAGAGCTCGTACTGGCAGTAAGT..................................................................................................................................................................................................3511.001.00--1.00-----------------------------------------------------
.................................................................................................................................AGCACTTTGGGAGGCTGAGGCGGGCGGAGGAC.........................................................................................321.000.001.00-------------------------------------------------------
......................................................................................................................................TTTGGGAGGCTGAGGCGGGCGGTGCG..........................................................................................261.000.00-1.00------------------------------------------------------
...............................................................................................AGGGCTGGGCGTGGTGGGTA.......................................................................................................................................201.000.00---------1.00----------------------------------------------
.........................................................................................................................................................................................................................AATTAGCTGGGCGCGGTGGAGAG..........231.000.00-1.00------------------------------------------------------
........................................................................................................................................TGGGAGGCTGAGGCGGGCGGGCGT..........................................................................................241.000.00-1.00------------------------------------------------------
..........................................................................................................................................GGAGGCTGAGGCGGGCGGGCCC..........................................................................................221.000.00-1.00------------------------------------------------------
........................................................................................................................................TGGGAGGCTGAGGCGGGCGGAAAT..........................................................................................241.000.00--------1.00-----------------------------------------------
.......................................................................................................................................................................................................................................GGTGGCGGGCGCCTGTCCAT201.000.00--------------------------------------1.00-----------------
.............................................................................................................................................................................................................................AGCTGGGCGCGGTGGCGGGCACCC.....241.000.00-1.00------------------------------------------------------
............................................................................................................................................................................................................................TAGCTGGGCGCGGTGGCGGGGATG......241.000.00-1.00------------------------------------------------------
........................................................................................................................................TGGGAGGCTGAGGCGGGCGGGAGG..........................................................................................241.000.00-1.00------------------------------------------------------
..................................................................................................................................GCACTTTGGGAGGCTGAGGCGGGCGGGGGA..........................................................................................301.000.00------------------1.00-------------------------------------
..........................................................................................................................................................................AGATCGAGACCACGGTGAAACCCCCCC.....................................................271.000.001.00-------------------------------------------------------
............................................................................................................................................AGGCTGAGGCGGGCGGTAGT..........................................................................................201.000.00---------------------------------------1.00----------------
...........................ACATCAGAGAGCTCGTACTGGCAGG......................................................................................................................................................................................................251.000.00------------1.00-------------------------------------------
......................GAAAAACATCAGAGAGCTCGTACTGGCAGT......................................................................................................................................................................................................3011.001.00--1.00-----------------------------------------------------
.......................................................................................................................................TTGGGAGGCTGAGGCGGGCGGGTA...........................................................................................241.000.00-------------1.00------------------------------------------
.........................................................................................................................................................CGGATCACAAGGTCAGGACTG............................................................................211.000.00---------------1.00----------------------------------------
........................................................................................................................................TGGGAGGCTGAGGCGGGCGGGGT...........................................................................................231.000.001.00-------------------------------------------------------
..........................................................................................................................................................................................................................ATTAGCTGGGCGCGGTCGTG............201.000.001.00-------------------------------------------------------
................................................................................................................................................TGAGGCGGGCGGATCACAAAG.....................................................................................211.000.00-------1.00------------------------------------------------
............................................................................................................................................................................ATCGAGACCACGGTGAATGGC.........................................................211.000.00-----1.00--------------------------------------------------
............................................................................................................................................................................................................................TAGCTGGGCGCGGTGGCGGGTGGC......241.000.00-1.00------------------------------------------------------
..................................AGAGCTCGTACTGGCA........................................................................................................................................................................................................1620.500.50-------------------------------------------------------0.50
...................TGTGAAAAACATCAGAG......................................................................................................................................................................................................................1720.500.50------------------------------------------------------0.50-

Antisense strand
AGGACTATGTGACACTCTATGTGAAAAACATCAGAGAGCTCGTACTGGCAGTAAGTAATGATTTTTAATGCAGTAGAATTTAAGAATGTATCTTTAGGGCTGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGATCACAAGGTCAGGAGATCGAGACCACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCTGGGCGCGGTGGCGGGCGCCTGTAGT
............................................................................................................((((.((.(((((((..((((((....)))))).......))))))))))))).........................................................................................
.........................................................................................90.......................................................................163.....................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR189782SRR038855(GSM458538)
D10. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR040014(GSM532899)
G623N. (cervix)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
...............................................................................................AGGGCTGGGCGTGGTGGCTCACGCCTGTCG............................................................................................................................. 304.000.004.00-------------------------------------------------------
..............................................................................................................................................................................................................................GCTGGGCGCGGTGGCGGGCGCCTGTCGA 282.000.002.00-------------------------------------------------------
................................................................................................GGGCTGGGCGTGGTGGCTCACGCCTGTGAC............................................................................................................................ 302.000.002.00-------------------------------------------------------
..................................................................................................................................................................................ACCACGGTGAAACCCCGTCTCTACTATCCG.......................................... 302.000.002.00-------------------------------------------------------
................................................................................................GGGCTGGGCGTGGTGGCTCACGCCTGTGGTC........................................................................................................................... 312.000.002.00-------------------------------------------------------
.................................................................................................................................................GAGGCGGGCGGATCACAAGGTT................................................................................... 222.000.00--------------2.00-----------------------------------------
...................................................................................................................................................................................CCACGGTGAAACCCCGTCTCTACCCC............................................. 261.000.001.00-------------------------------------------------------
................................................................................................GGGCTGGGCGTGGTGGCTCACGCCTGTGGGC........................................................................................................................... 311.000.001.00-------------------------------------------------------
.........................................................................................................................................................................................TGAAACCCCGTCTCTACTAGCTC.......................................... 231.000.00-1.00------------------------------------------------------
.................................................................................................................................................................................GACCACGGTGAAACCCCGTCTCTCCA............................................... 261.000.001.00-------------------------------------------------------
..........................................................................................................................................................................................................................................GGCGGGCGCCTGTAGTCACA 201.000.00---------1.00----------------------------------------------
........................................................................................................................................TGGGAGGCTGAGGCGGGCCTTA............................................................................................ 221.000.00----------------------------------------1.00---------------
.............................................................................................................................................................................................ACCCCGTCTCTACTAAAAATACAAAAAACAC.............................. 311.000.001.00-------------------------------------------------------
.........................................................................................................................................................CGGATCACAAGGTCAGGAGATCTC......................................................................... 241.000.00----------1.00---------------------------------------------
...........................................................................................................................................................................................AAACCCCGTCTCTACTAAAAATACAGTAG.................................. 291.000.00------------------------1.00-------------------------------
.............................................................................................................................................................................................ACCCCGTCTCTACTAAAAATACAAAAAAGC............................... 301.000.00-1.00------------------------------------------------------
.........................................................................................................................................GGGAGGCTGAGGCGGGCGGATCACAATT..................................................................................... 281.000.00-----1.00--------------------------------------------------
...................................................................................................................................................................................CCACGGTGAAACCCCGTCTCTACTGCCT........................................... 281.000.001.00-------------------------------------------------------
...........................................................................................................................................................................................AAACCCCGTCTCTACTAAAAATGCCG..................................... 261.000.001.00-------------------------------------------------------
.............................................................................................................................................GGCTGAGGCGGGCGGATCCGG........................................................................................ 211.000.001.00-------------------------------------------------------
...................................................................................................................................................................................CCACGGTGAAACCCCGTCTCTACAG.............................................. 251.000.001.00-------------------------------------------------------
...................................................................................................................................................................................................................................GCGCGGTGGCGGGCGCCTGTAGG 231.000.00-1.00------------------------------------------------------
.................................................................................................GGCTGGGCGTGGTGGCTCACGCCTGTGCGG........................................................................................................................... 301.000.001.00-------------------------------------------------------
...................................................................................................................................................................................................................................GCGCGGTGGCGGGCGCCTGTAGTTGGC 271.000.001.00-------------------------------------------------------
......................................................................................................................................................................................................................................CTACAGGCGCCCGCCACCG. 1901.001.00------------------------------------------1.00-------------
.........................................................................................................................................................................................................................................TGGCGGGCGCCTGTAGTAAT 201.000.00---------------------------------------------------1.00----
.................................................................................................................................................................................GACCACGGTGAAACCCCGTCTCTCGG............................................... 261.000.00-1.00------------------------------------------------------
................................................................................................GGGCTGGGCGTGGTGGCTCACGCCTGTGGT............................................................................................................................ 301.000.001.00-------------------------------------------------------
.........................................................................................................................................................................................TGAAACCCCGTCTCTACGCA............................................. 201.000.00----------------------------1.00---------------------------
................................................................................................GGGCTGGGCGTGGTGGCTCACGCCTGTGGG............................................................................................................................ 301.000.001.00-------------------------------------------------------
.............................................................................................................................................GGCTGAGGCGGGCGGATCACAAGGCTC.................................................................................. 271.000.00-----------------------------------1.00--------------------
............................................................................................................................................AGGCTGAGGCGGGCGAC............................................................................................. 171.000.00------------------------------1.00-------------------------
..................................................................................................................................................................................................................................GGCGCGGTGGCGGGCGCCTGTAGGCG 261.000.001.00-------------------------------------------------------
...................................................................................................................................................................................CCACGGTGAAACCCCGTCTCTACTCGGG........................................... 281.000.00-1.00------------------------------------------------------
....................................................................................................................................................................................................................................CGCGGTGGCGGGCGCCGGG... 191.000.00-----------------------------1.00--------------------------
......................................................................................................................................................................................CGGTGAAACCCCGTCTCTGGTC.............................................. 221.000.001.00-------------------------------------------------------
..............................................................................................................................................................................................................................GCTGGGCGCGGTGGCGGGCGCCTGTCG. 271.000.001.00-------------------------------------------------------
..............................................................................................TAGGGCTGGGCGTGGTGGCTGGA..................................................................................................................................... 231.000.001.00-------------------------------------------------------
...............................................................................................................................................................................CGGGGTTTCACCGTGGTCTC....................................................... 2001.001.00----1.00---------------------------------------------------
................................................................................................GGGCTGGGCGTGGTGGCTCACGCCTGTGGAG........................................................................................................................... 311.000.00-1.00------------------------------------------------------
...............................................................................................AGGGCTGGGCGTGGTGGCTCACGCCTGTACG............................................................................................................................ 311.000.001.00-------------------------------------------------------