| (1) B-CELL | (10) CELL-LINE | (1) HELA | (2) LIVER | (2) SKIN | (1) UTERUS |
| TTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGTAAGTTAGTAATTCTTTAACATAAAGTCAAATACACAAGGCCTATCTCAGTCTCTCAAGAGTTTTTTTCTGAATAAAATGTTAGAATGTATTACACCTATGGGCTTTTGTTGTTGTTACTGTGAAATATACCTTAGAACATTTTTATTCTTTTTTTTTCCAGATGGCAGAAATGATGTTCAGGAGAGTAGCTTAAGAGACTTAATAAAAGAG ............................................................................................................((((((((((((..((((((((.(((.....(((..........)))...))).))))))..))..)))))))).))))............................................................... .......................................................................................................104.............................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330900(SRX091738) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR039618(GSM531981) HBV(+) Side Tissue Sample 1. (liver) | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR037937(GSM510475) 293cand2. (cell line) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................................ACATTTTTATTCTTTTTTTTTTTTG.................................................. | 25 | 9.00 | 0.00 | 4.00 | 2.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................AACATTTTTATTCTTTTTTTTTTTG................................................... | 25 | 9.00 | 0.00 | 4.00 | 3.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................ACATTTTTATTCTTTTTTTTTTTG................................................... | 24 | 6.00 | 0.00 | 4.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................TTATTCTTTTTTTTTCGGTT................................................. | 20 | 5.00 | 0.00 | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................CATTTTTATTCTTTTTTTTTTTTG.................................................. | 24 | 5.00 | 0.00 | 4.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................AACATTTTTATTCTTTTTTTTTTTTG.................................................. | 26 | 4.00 | 0.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................TATTCTTTTTTTTTCGGTT................................................. | 19 | 3.00 | 0.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................AACATTTTTATTCTTTTTTTTG...................................................... | 22 | 2.00 | 0.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................AACATTTTTATTCTTTTTTTTTTG.................................................... | 24 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................TTTTATTCTTTTTTTTTCG.................................................... | 19 | 2.00 | 0.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................GAATAAAATGTTAGAATGTATTA....................................................................................................................... | 23 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................TTATTCTTTTTTTTTCCGG.................................................. | 19 | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................AACATTTTTATTCTTTTTTTTTG..................................................... | 23 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................ATTTTTATTCTTTTTTTTTCCATTT................................................ | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................ACATTTTTATTCTTTTTTTTG...................................................... | 21 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................................................TGTTCAGGAGAGTAGCTTAAGA............... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................TATTCTTTTTTTTTCCATG................................................. | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................TTGTTGTTGTTACTGTAGAA...................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ....................................................................................................................................................................................TTTATTCTTTTTTTTTCG.................................................... | 18 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................CATTTTTATTCTTTTTTTTTAA.................................................... | 22 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................TTTTTATTCTTTTTTTTGTGG................................................... | 21 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................................................................CAGGAGAGTAGCTTAAGAGA............. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................AAATGATGTTCAGGAGAGT........................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................................................................................................................................................................................................................AGGAGAGTAGCTTAAGAGACTTAA........ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................ATTCTTTTTTTTTCCATTCA............................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................AACATTTTTATTCTTTTTTTTTTTA................................................... | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................CTGAGTAGCTGGGACTACAGT................................................................................................................................................................................................................... | 21 | 0 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................................................................................................................................................TTATTCTTTTTTTTTCGGAG................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................................................................TAAGAGACTTAATAAAAG.. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ....................................................................................................................................................................................TTTATTCTTTTTTTTTCCCAG................................................. | 21 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................GAGTTTTTTTCTGAACATA....................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................AACATTTTTATTCTTTTTTTG....................................................... | 21 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................................ATGTTCAGGAGAGTAGCTTAAGAG.............. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................................................................................................................................................................................TTTATTCTTTTTTTTTCCAG.................................................. | 20 | 2 | 1.00 | 1.00 | - | - | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TTTTATTCTTTTTTTTTCCTGGC................................................ | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................TTATTCTTTTTTTTTCCAG.................................................. | 19 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGTAAGTTAGTAATTCTTTAACATAAAGTCAAATACACAAGGCCTATCTCAGTCTCTCAAGAGTTTTTTTCTGAATAAAATGTTAGAATGTATTACACCTATGGGCTTTTGTTGTTGTTACTGTGAAATATACCTTAGAACATTTTTATTCTTTTTTTTTCCAGATGGCAGAAATGATGTTCAGGAGAGTAGCTTAAGAGACTTAATAAAAGAG ............................................................................................................((((((((((((..((((((((.(((.....(((..........)))...))).))))))..))..)))))))).))))............................................................... .......................................................................................................104.............................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330900(SRX091738) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR039618(GSM531981) HBV(+) Side Tissue Sample 1. (liver) | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR037937(GSM510475) 293cand2. (cell line) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................GTTAGAATGTATTACGATC.................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | |
| ...........................................................................................................................................................................................................................CTTAAGCTACTCTCC................ | 15 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 |
| ........................................................................................................................................AACAACAAAAGCCCAT.................................................................................................. | 16 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | 0.14 | - | - | - | - | - | - | - |