ID: uc003hqr.2_intron_0_0_chr4_88343828_f.5p
GENE: (1)
chr4:88343778-88344027+


(1)
AGO2.ip
(8)
B-CELL
(3)
BRAIN
(7)
BREAST
(23)
CELL-LINE
(7)
CERVIX
(1)
FIBROBLAST
(4)
HEART
(3)
HELA
(1)
KIDNEY
(5)
LIVER
(4)
OTHER
(1)
RRP40.ip
(16)
SKIN
(1)
TESTES
(1)
UTERUS
(1)
XRN.ip

Sense strand
CCGCGGTTTCCCCAGGCAGCTGGCGCTGGAGGCTTCGGCGTCACGTGCTGGTCTGGATTTTTCTCGATGCACTGGGGAAAGCGGTGGACTCTTATCGTGGGAGGGCTCTTGATCTGTGATTTATAGATAGGCACAGCTACTCCCGTTCGGGAACCCAACGGCAGACAGGTCCTAGTGCCCATCAGATACCCGCGGCCGGGACTCGGAGCTGTGGGGTGTGGGGAGGCGGAGGCACCAACTAAGAGCGACC
......................................................((((((.((....(((..((((....(((((((....)))))))((((((((((((.(((((((...))))))))))...)))).))))).........))))...))))).))))))..............................................................................
..................................................51........................................................................................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR343334SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR189784SRR029124(GSM416753)
HeLa. (hela)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM359173(GSM359173)
hela_10_1. (hela)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532883(GSM532883)
G871N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR040008(GSM532893)
G727N. (cervix)
SRR040007(GSM532892)
G601T. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577741(Rovira)
total RNA. (breast)
GSM359204(GSM359204)
HepG2_nucl_low. (cell line)
GSM339994(GSM339994)
hues6. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR038859(GSM458542)
MM386. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR029126(GSM416755)
143B. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM339996(GSM339996)
hues6Neuron. (cell line)
SRR040012(GSM532897)
G648N. (cervix)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)
SRR040024(GSM532909)
G613N. (cervix)
SRR038856(GSM458539)
D11. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553574(SRX182780)
source: Heart. (Heart)
GSM359190(GSM359190)
HepG2_3pM_4. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040015(GSM532900)
G623T. (cervix)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR191475(GSM715585)
18genomic small RNA (size selected RNA from t. (breast)
...................................................TCTGGATTTTTCTCGATGGTT..................................................................................................................................................................................219.000.00-9.00------------------------------------------------------------------------------------
....................TGGCGCTGGAGGCTTCGG....................................................................................................................................................................................................................1815.005.003.00--------1.00-----------------------------------------------------1.00----------------------
..................GCTGGCGCTGGAGGCTTCGGC...................................................................................................................................................................................................................2113.003.00--1.00------2.00----------------------------------------------------------------------------
........................................................................................................................................................ACCCAACGGCAGACAGGT................................................................................1813.003.003.00-------------------------------------------------------------------------------------
..................................................................ATGCACTGGGGAAAGCGG......................................................................................................................................................................1813.003.00---1.00--------------------1.00------------------------------------------------1.00------------
.......................................................................................ACTCTTATCGTGGGAAAG.................................................................................................................................................183.000.00-------3.00------------------------------------------------------------------------------
...............GCAGCTGGCGCTGGAGGCTTCGGCG..................................................................................................................................................................................................................2512.002.00-----------1.00-----------------------------------------------1.00--------------------------
...................................................................................GTGGACTCTTATCGTG.......................................................................................................................................................1612.002.00---------------------2.00----------------------------------------------------------------
.................................................................................................TGGGAGGGCTCTTGATCTG......................................................................................................................................1912.002.00------------------------------------------------1.001.00------------------------------------
......................................................................ACTGGGGAAAGCGGTGGACTC...............................................................................................................................................................2112.002.00--------------------------2.00-----------------------------------------------------------
.............................................................................AAAGCGGTGGACTCTGG............................................................................................................................................................172.000.00-----2.00--------------------------------------------------------------------------------
.................AGCTGGCGCTGGAGGCTTCGGCG..................................................................................................................................................................................................................2312.002.00-------------2.00------------------------------------------------------------------------
...........................................................................................TTATCGTGGGAGGGCTCTTG...........................................................................................................................................2012.002.002.00-------------------------------------------------------------------------------------
....................TGGCGCTGGAGGCTTCGGCGTC................................................................................................................................................................................................................2212.002.00--------------------------------1.00---1.00-------------------------------------------------
..................GCTGGCGCTGGAGGCTTCGG....................................................................................................................................................................................................................2012.002.00--2.00-----------------------------------------------------------------------------------
.......................................................................................ACTCTTATCGTGGGAGGG.................................................................................................................................................1812.002.00-----------------1.001.00-------------------------------------------------------------------
..............................................................CTCGATGCACTGGGGAAAGCGG......................................................................................................................................................................2212.002.00---2.00----------------------------------------------------------------------------------
....................................................................GCACTGGGGAAAGCGGTG....................................................................................................................................................................1812.002.00---------------------------------------1.00------------------------1.00---------------------
...................................................................................................................GTGATTTATAGATAGGCA.....................................................................................................................1812.002.00---------------2.00----------------------------------------------------------------------
...............................................................................................CGTGGGAGGGCTCTTGATCTG......................................................................................................................................2111.001.00----------------------------------------1.00---------------------------------------------
.........................................................................................................CTCTTGATCTGTGATTTCCAG............................................................................................................................211.000.00---------------------------------------------------------------------------------1.00----
.............................................................................AAAGCGGTGGACTCTTGCA..........................................................................................................................................................191.000.00-----1.00--------------------------------------------------------------------------------
..........................................................................................................................................................................................................TCGGAGCTGTGGGGTGTGGGGAGG........................2411.001.00--------------------------------------------------------------------------1.00-----------
......................................................................................................................................AGCTACTCCCGTTCGGGAACCCAACG..........................................................................................2611.001.00-------------------------------1.00------------------------------------------------------
.......................................................................................................................................................................................AGATACCCGCGGCCGGGACTCGGA...........................................2411.001.00-----------------------------------------------------------------------------1.00--------
.....................................................................................................................................................................................................................................AGGCACCAACTAAGAGCGA..1911.001.00----------------------------------------------------------------------------------1.00---
..........................................ACGTGCTGGTCTGGATTTTT............................................................................................................................................................................................2011.001.00----------1.00---------------------------------------------------------------------------
.....................................................................CACTGGGGAAAGCGGTGGAC.................................................................................................................................................................2011.001.00--------------------1.00-----------------------------------------------------------------
...........................................................................................................................................................................................................CGGAGCTGTGGGGTGTGTGGA..........................211.000.00------------------------------------------------------------------------1.00-------------
........................................................................................CTCTTATCGTGGGAGGGCTCT.............................................................................................................................................2111.001.00-------------------1.00------------------------------------------------------------------
.....................................................................................................................GATTTATAGATAGGCACAGGGAA..............................................................................................................231.000.00-----------------------------------------------1.00--------------------------------------
...................................................................TGCACTGGGGAAAGCGGGAC...................................................................................................................................................................201.000.00------------------------------------------------------1.00-------------------------------
................................................................................................................................AGGCACAGCTACTCCCGTTCGGGAATA...............................................................................................271.000.00---------------------------1.00----------------------------------------------------------
......................................CGTCACGTGCTGGTCTGGATTT..............................................................................................................................................................................................2211.001.00----1.00---------------------------------------------------------------------------------
....................................................................................................................................................................................ATCAGATACCCGCGGCCGG...................................................1911.001.00---1.00----------------------------------------------------------------------------------
.......................................................................................................................................................................................AGATACCCGCGGCCGGGACTCGGAGCTGTG.....................................3011.001.00-------------------------------------------------------1.00------------------------------
......................................................................................GACTCTTATCGTGGGGTCT.................................................................................................................................................191.000.00--------------------------------------------1.00-----------------------------------------
..................................................................ATGCACTGGGGAAAGCGGTGG...................................................................................................................................................................2111.001.00----1.00---------------------------------------------------------------------------------
........................................................................................................................................................................................................................................CACCAACTAAGAGCGA..1611.001.00---------------------------------1.00----------------------------------------------------
.......................................................................................................................TTTATAGATAGGCACAGCTACTCCCAT........................................................................................................271.000.00----------1.00---------------------------------------------------------------------------
...................CTGGCGCTGGAGGCTTCGGCGT.................................................................................................................................................................................................................2211.001.00----------------------------------------------------------------------------1.00---------
..................................................................ATGCACTGGGGAAAGCGGTGGACTCT..............................................................................................................................................................2611.001.00------------------------------------------------------------------------------1.00-------
........................................................................TGGGGAAAGCGGTGGACTCTTATCGTGG......................................................................................................................................................2811.001.00----------------------------------------------1.00---------------------------------------
...........................................................................................................................................................................................................CGGAGCTGTGGGGTGTGGGGAGGCGGAGGC.................3011.001.00-----------------------------------------1.00--------------------------------------------
..............................................................................AAGCGGTGGACTCTTATCG.........................................................................................................................................................1911.001.00--1.00-----------------------------------------------------------------------------------
................................................................................................................................................................GCAGACAGGTCCTAGTGCCCATCA..................................................................2411.001.00----------------------------1.00---------------------------------------------------------
................CAGCTGGCGCTGGAGGCT........................................................................................................................................................................................................................1811.001.00----------------------------------------------------------------------1.00---------------
.....................................................TGGATTTTTCTCGATGCACTGGGG.............................................................................................................................................................................2411.001.00----1.00---------------------------------------------------------------------------------
..............................................................CTCGATGCACTGGGGAAAGCG.......................................................................................................................................................................2111.001.00---------------------------------------------------------------------1.00----------------
...........................GGAGGCTTCGGCGTCACGT............................................................................................................................................................................................................1911.001.00---------------------------1.00----------------------------------------------------------
..........................................ACGTGCTGGTCTGGATTT..............................................................................................................................................................................................1811.001.00-------------------------------------1.00------------------------------------------------
.......................................................................CTGGGGAAAGCGGTGGACTCTTATCGTGG......................................................................................................................................................2911.001.00------1.00-------------------------------------------------------------------------------
........................................................ATTTTTCTCGATGCAGAG................................................................................................................................................................................181.000.00--------------1.00-----------------------------------------------------------------------
.........................................................................................................................................................................................ATACCCGCGGCCGGGACTCGG............................................2111.001.00------1.00-------------------------------------------------------------------------------
...................................................................................GTGGACTCTTATCGTGGGAGGGCTC..............................................................................................................................................2511.001.00-------------------------1.00------------------------------------------------------------
............................................................................................................TTGATCTGTGATTTATAGATAGGCAC....................................................................................................................2611.001.00-----------------1.00--------------------------------------------------------------------
........................................................................TGGGGAAAGCGGTGGACTCTT.............................................................................................................................................................2111.001.00--------------------------------------------------------------------1.00-----------------
................................................................CGATGCACTGGGGAAAGCGGTGGACT................................................................................................................................................................2611.001.00-------------------------------------------------------------1.00------------------------
..............................................................................................................................................................................................................AGCTGTGGGGTGTGGGGAGGCGGAGGCAC...............2911.001.00-----1.00--------------------------------------------------------------------------------
...................................................................TGCACTGGGGAAAGCGGTGG...................................................................................................................................................................2011.001.00----------1.00---------------------------------------------------------------------------
......................................................GGATTTTTCTCGATGCACTGG...............................................................................................................................................................................2111.001.00-------------------------------------------------------------------1.00------------------
................CAGCTGGCGCTGGAGGCTT.......................................................................................................................................................................................................................1911.001.00--1.00-----------------------------------------------------------------------------------
................................................................CGATGCACTGGGGAAAGCGG......................................................................................................................................................................2011.001.00---1.00----------------------------------------------------------------------------------
...............GCAGCTGGCGCTGGAGGCT........................................................................................................................................................................................................................1911.001.00--1.00-----------------------------------------------------------------------------------
...............................................................TCGATGCACTGGGGAAAGCGGT.....................................................................................................................................................................2211.001.00-------------------------1.00------------------------------------------------------------
........................................................................................CTCTTATCGTGGGAGGGCTCTTGAT.........................................................................................................................................2511.001.00----------------------------------------------------1.00---------------------------------
.....................................GCGTCACGTGCTGGTCTG...................................................................................................................................................................................................1811.001.00----------------1.00---------------------------------------------------------------------
.........................................................................................TCTTATCGTGGGAGGGCT...............................................................................................................................................1811.001.00-----------------------------------------------------------------------1.00--------------
..............................................................CTCGATGCACTGGGGAAAGCGGTGGACTCTTATCGT........................................................................................................................................................3611.001.00--------------------------------------------------------------------------------1.00-----
........................................................................................................................................................................................................ACTCGGAGCTGTGGGGTGTG..............................2011.001.00-----------1.00--------------------------------------------------------------------------
.......................................................................................................................................................................................................GACTCGGAGCTGTGGGG..................................1711.001.00-----------------------------------1.00--------------------------------------------------
.......................................................................CTGGGGAAAGCGGTGGACTCTT.............................................................................................................................................................2211.001.00--------------------1.00-----------------------------------------------------------------
......................GCGCTGGAGGCTTCGGCG..................................................................................................................................................................................................................1811.001.00------------------------------------------------------------1.00-------------------------
....................................................................................TGGACTCTTATCGTGGGAGGGC................................................................................................................................................2211.001.00---------------------------------------------------------------------------1.00----------
........................................................................................CTCTTATCGTGGGAGGGCT...............................................................................................................................................1911.001.00--------------------------------------------------------1.00-----------------------------
.....................................................................................GGACTCTTATCGTGGGAGGG.................................................................................................................................................2011.001.00-------------------------------------------------------------------------------1.00------
.....................................................................CACTGGGGAAAGCGGTGGAT.................................................................................................................................................................201.000.00-------------------------------------------1.00------------------------------------------
...................CTGGCGCTGGAGGCTTCGG....................................................................................................................................................................................................................1911.001.00-----------------------------------------------------------------1.00--------------------
................CAGCTGGCGCTGGAGGCTTC......................................................................................................................................................................................................................2011.001.00------------------------------------------1.00-------------------------------------------
..........................................................................................CTTATCGTGGGAGGGCT...............................................................................................................................................1711.001.00------------------1.00-------------------------------------------------------------------
..............................................................................................................................................................................................CGCGGCCGGGACTCGGAG..........................................1811.001.00--------1.00-----------------------------------------------------------------------------
...............................................................TCGATGCACTGGGGAAAGCGG......................................................................................................................................................................2111.001.001.00-------------------------------------------------------------------------------------
.............................................................................AAAGCGGTGGACTCTGGC...........................................................................................................................................................181.000.00-----1.00--------------------------------------------------------------------------------
...........................................CGTGCTGGTCTGGATTTTT............................................................................................................................................................................................1911.001.00--------------------------------------1.00-----------------------------------------------
....................................................................GCACTGGGGAAAGCGGTGGA..................................................................................................................................................................2011.001.00-----------------------1.00--------------------------------------------------------------
.....................GGCGCTGGAGGCTTCGGCG..................................................................................................................................................................................................................1911.001.00-----------1.00--------------------------------------------------------------------------
.........................................................................................TCTTATCGTGGGAGGGC................................................................................................................................................1711.001.00-----------------------------1.00--------------------------------------------------------
........................................................................................................................................................................................GATACCCGCGGCCGGGCTTT..............................................201.000.00---------------------------------------------1.00----------------------------------------
................................................................................GCGGTGGACTCTTATCGTGGG.....................................................................................................................................................2111.001.00---1.00----------------------------------------------------------------------------------
...............................................................................................................................................................................................................GCTGTGGGGTGTGGGGAGGCGG.....................2211.001.00--------------------------------------------------------------1.00-----------------------
..........................................ACGTGCTGGTCTGGATTTT.............................................................................................................................................................................................1911.001.00---------------------------------------------------------1.00----------------------------
............................................................................GAAAGCGGTGGACTCTTAT...........................................................................................................................................................1911.001.00---------------------------------------------------1.00----------------------------------
..............................................................................AAGCGGTGGACTCTTATCGTGGGAGGGC................................................................................................................................................2811.001.00------------------------------1.00-------------------------------------------------------
........................................................................TGGGGAAAGCGGTGGACT................................................................................................................................................................1811.001.00-----------------------------------------------------1.00--------------------------------
..................GCTGGCGCTGGAGGCTTCGGCG..................................................................................................................................................................................................................2211.001.00--1.00-----------------------------------------------------------------------------------
...........................................................................................................................................................................................................CGGAGCTGTGGGGTGTGGGGA..........................2111.001.00----1.00---------------------------------------------------------------------------------
.......................................................................................................................................................AACCCAACGGCAGACAGGT................................................................................1911.001.00-----------------------1.00--------------------------------------------------------------
..............................................................................................TCGTGGGAGGGCTCTTGATCTG......................................................................................................................................2211.001.001.00-------------------------------------------------------------------------------------
.......................................................................CTGGGGAAAGCGGTGGACTCT..............................................................................................................................................................2111.001.00----------------------------1.00---------------------------------------------------------
................................................................................................................................................................................................CGGCCGGGACTCGGAGCTGTG.....................................2111.001.00------1.00-------------------------------------------------------------------------------
...........................................CGTGCTGGTCTGGATTTTTCT..........................................................................................................................................................................................2111.001.00------1.00-------------------------------------------------------------------------------
................CAGCTGGCGCTGGAGGCTTCGA....................................................................................................................................................................................................................221.000.00-------------------1.00------------------------------------------------------------------
...............................................................TCGATGCACTGGGGAAAG.........................................................................................................................................................................1820.500.50-----------------------------------------------------------------------------------0.50--
...........................................................................................................................................................................................................CGGAGCTGTGGGGTGT...............................1620.500.50------------------------------------------------------------------------------------0.50-
......................................................................................................................................................................................................GGACTCGGAGCTGTGGG...................................1720.500.50-------------------------------------------------------------------------------------0.50
................CAGCTGGCGCTGGAGG..........................................................................................................................................................................................................................1630.330.33-----------------------------0.33--------------------------------------------------------

Antisense strand
CCGCGGTTTCCCCAGGCAGCTGGCGCTGGAGGCTTCGGCGTCACGTGCTGGTCTGGATTTTTCTCGATGCACTGGGGAAAGCGGTGGACTCTTATCGTGGGAGGGCTCTTGATCTGTGATTTATAGATAGGCACAGCTACTCCCGTTCGGGAACCCAACGGCAGACAGGTCCTAGTGCCCATCAGATACCCGCGGCCGGGACTCGGAGCTGTGGGGTGTGGGGAGGCGGAGGCACCAACTAAGAGCGACC
......................................................((((((.((....(((..((((....(((((((....)))))))((((((((((((.(((((((...))))))))))...)))).))))).........))))...))))).))))))..............................................................................
..................................................51........................................................................................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR343334SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR189784SRR029124(GSM416753)
HeLa. (hela)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM359173(GSM359173)
hela_10_1. (hela)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532883(GSM532883)
G871N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR040008(GSM532893)
G727N. (cervix)
SRR040007(GSM532892)
G601T. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577741(Rovira)
total RNA. (breast)
GSM359204(GSM359204)
HepG2_nucl_low. (cell line)
GSM339994(GSM339994)
hues6. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR038859(GSM458542)
MM386. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR029126(GSM416755)
143B. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM339996(GSM339996)
hues6Neuron. (cell line)
SRR040012(GSM532897)
G648N. (cervix)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)
SRR040024(GSM532909)
G613N. (cervix)
SRR038856(GSM458539)
D11. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553574(SRX182780)
source: Heart. (Heart)
GSM359190(GSM359190)
HepG2_3pM_4. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040015(GSM532900)
G623T. (cervix)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR191475(GSM715585)
18genomic small RNA (size selected RNA from t. (breast)
........................................................................................................................................................................................................................................CACCAACTAAGAGCGGAGC 196.000.00------------3.00-1.00-------------------1.00-----------------------1.00---------------------------
..........................................................................................................................................................GGCACTAGGACCTGTCTGCCGTTGG....................................................................... 2512.002.00----------------------2.00---------------------------------------------------------------
.....................................................................................................................................CCCGAACGGGAGTAGCTG................................................................................................... 1811.001.00--------1.00-----------------------------------------------------------------------------
...............................................................................................................................................................................................GCGGCCGGGACTCGGAAA......................................... 181.000.00--------1.00-----------------------------------------------------------------------------
........................................................................................................................................................................................................................................CACCAACTAAGAGCGGA. 171.000.00------------------------------------------------------------------1.00-------------------
........................................................................................................................................................................................................................................CACCAACTAAGAGCGGAG 181.000.00----1.00---------------------------------------------------------------------------------
.............................................................................................................................................................................AGTGCCCATCAGATACCCTGGA....................................................... 221.000.00---1.00----------------------------------------------------------------------------------
........................................................................................................................................................................GCCGCGGGTATCTGATGGGCACTAGGAC...................................................... 2811.001.00--------------------------------------------------1.00-----------------------------------
...................................................................................................................................................................................................CACAGCTCCGAGTCCCGG..................................... 1811.001.00------------------------1.00-------------------------------------------------------------
..................................................................................................................................................................................................ACAGCTCCGAGTCCCGGC...................................... 1811.001.00----------------1.00---------------------------------------------------------------------