ID: uc003hqd.2_intron_0_0_chr4_87745056_r.3p
GENE: SLC10A6(5)
chr4:87745006-87745255-


(1)
BRAIN
(3)
CELL-LINE
(1)
CERVIX
(1)
HEART
(1)
HELA
(1)
OTHER
(26)
SKIN

Sense strand
CATCCAGACAAAAGAGCCATTCTGATACACTGAATCCTTCTGTTCTATAGCTTTCTCTCTTTCCCCCTTCTTTTCCCTGGGTGTTTATACATACATGATGCCACTGAAACAAACACCTGAAGGATTGACAAGTGTACAGTGTCACCAAATTAGACTCTTTGTTAAAGTGATTGTTAATACTTGTATGTTTTAACACCTAGCATATCAGACGTACAAGAGGAGATTGAAGAACAAACATGGAAAAAAGAAC
.......................................................................((((....((((((...........))))))...)))).............................................................................................................................................
............................................45..................................................................113.......................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189787SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR189784SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR040043(GSM532928)
G428T. (cervix)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
.........................................................................................CATACATGATGCCACTGAAA.............................................................................................................................................20122.0022.004.003.002.001.002.003.002.00--1.001.00--1.00----1.001.00----------------
.........................................................................................CATACATGATGCCACTGAAACAAACACCTGAAG................................................................................................................................33111.0011.00--1.002.00-----1.002.00----------1.001.00----1.00---1.001.00---
..........................................................................................ATACATGATGCCACTGAAA.............................................................................................................................................1919.009.002.001.002.001.00--------2.00-------------1.00---------
..........................................................................................ATACATGATGCCACTGAAACAAACACCTGAAG................................................................................................................................3217.007.001.001.001.00-1.00---1.00----1.00--1.00-------------------
...........................................................................................................................................................................................................................................CATGGAAAAAAGAACTCTG194.000.00-----------2.00------------------1.00--1.00--
.....................................................................................................................................................................................................TAGCATATCAGACGTTGAC..................................193.000.00-------3.00----------------------------
.............................................................................................................CAAACACCTGAAGGATTGACA........................................................................................................................2112.002.00-2.00----------------------------------
............................................................................................................................................................................................................................AGATTGAAGAACAAACATGGA.........2112.002.002.00-----------------------------------
.................................................GCTTTCTCTCTTTCCCCTG......................................................................................................................................................................................191.000.00--------------------1.00---------------
.................................................................................................ATGCCACTGAAACAAACACCTGAAGGATT............................................................................................................................2911.001.00------------1.00-----------------------
......................TGATACACTGAATCCTTCTGTT..............................................................................................................................................................................................................2211.001.00------1.00-----------------------------
........................................................................................................................................................................................................................GAGGAGATTGAAGAACAAACATGGAAAAAAG...3111.001.00-----------1.00------------------------
.........................................................TCTTTCCCCCTTCTTTATT..............................................................................................................................................................................191.000.00-----------------------------1.00------
.........................................................................................CATACATGATGCCACTGAA..............................................................................................................................................1911.001.00---------1.00--------------------------
...........................................................................................................................................................................................................................GAGATTGAAGAACAAACATG...........2011.001.00--------------1.00---------------------
.........................................................................................CATACATGATGCCACTGAAACAAACACCTGGAG................................................................................................................................331.000.00--------1.00---------------------------
................................................................................................................................................................................................................ACGTACAAGAGGAGATTGAAGAACA.................2511.001.00------------------------1.00-----------
...........................................................................................................................................................................................................................GAGATTGAAGAACAAACATGG..........2111.001.00--------1.00---------------------------
........................................................CTCTTTCCCCCTTCTTTTTTTT............................................................................................................................................................................221.000.00-------------------------1.00----------
............................................................................................ACATGATGCCACTGAAACAAACACCTGAAGGA..............................................................................................................................3211.001.00----------------------------1.00-------
..........................................................................................ATACATGATGCCACTGAA..............................................................................................................................................1820.500.50----------------------------------0.50-
.............................................................................................CATGATGCCACTGAAA.............................................................................................................................................1640.250.25-----------------------------------0.25

Antisense strand
CATCCAGACAAAAGAGCCATTCTGATACACTGAATCCTTCTGTTCTATAGCTTTCTCTCTTTCCCCCTTCTTTTCCCTGGGTGTTTATACATACATGATGCCACTGAAACAAACACCTGAAGGATTGACAAGTGTACAGTGTCACCAAATTAGACTCTTTGTTAAAGTGATTGTTAATACTTGTATGTTTTAACACCTAGCATATCAGACGTACAAGAGGAGATTGAAGAACAAACATGGAAAAAAGAAC
.......................................................................((((....((((((...........))))))...)))).............................................................................................................................................
............................................45..................................................................113.......................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189787SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR189784SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR040043(GSM532928)
G428T. (cervix)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
.................................................................CCTTCTTTTCCCTGGGTAGGC.................................................................................................................................................................... 212.000.00-----------------1.00-----1.00------------
.............................................TATAGCTTTCTCTCTTAG........................................................................................................................................................................................... 181.000.00---------------1.00--------------------