ID: uc003hpi.1_intron_0_0_chr4_86396713_f.3p
GENE: ARHGAP24(1)
chr4:86491475-86491724+


(1)
AGO3.ip 		(1)
B-CELL 		(1)
BREAST 		(10)
CELL-LINE 		(1)
CERVIX 		(1)
HEART 		(1)
OTHER 		(5)
SKIN

Sense strand
TCTCTCTCTCTCTTTCTTTTTTTCTTTCTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTCTCTCTCTCTCTTTTTTTTTTTCTGGAGAAGAGTGGTTTAAAAGGGAGTTGAATATAACAGAGCACCTCATTATTTTCCTTTCTTTTTGTTTGCTAACTAGGAAAGTCCATCAGCTTGATAATGGAGGAGAACAATGACTCCACGGAGAAC
..............................................................................(((...((..((((....((.((((.(((((..............))))))))).))....))))..))..)))........((((...((.................))..))))........................................................
...................................................................68..................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189785SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040009(GSM532894)
G727T. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...........CTTTCTTTTTTTCTTTCTTCTTTG.......................................................................................................................................................................................................................2410.000.00--1.00-9.00-----------------
........................................................................CTTTCTTTCTTTCTTTCTTTCTACG.........................................................................................................................................................258.000.00-----8.00----------------
...............................................................TCTTTCTTTCTTTCTTTCTTTCTTTCTTGAT............................................................................................................................................................317.000.00-------7.00--------------
........................................................CTTTCTTTCTTTCTTTCTTTCTTTCTTGATG...................................................................................................................................................................317.000.00------7.00---------------
............................................CTTTCTTTCTTTCTTTCTTTCTTTCTATTG................................................................................................................................................................................307.000.00-7.00--------------------
.......................................TTTCTCTTTCTTTCTTTCTTTCTTTCTCG......................................................................................................................................................................................294.000.002.00----2.00----------------
....TCTCTCTCTTTCTTTTTTTCTTTCTGG...........................................................................................................................................................................................................................274.000.003.00--1.00------------------
.............TTCTTTTTTTCTTTCTTAAAG........................................................................................................................................................................................................................214.000.00--3.00-1.00-----------------
..............................CTTTCTTTCTTTCTCTTTCTTTCTTAG.................................................................................................................................................................................................273.000.00-3.00--------------------
........................................TTCTCTTTCTTTCTTTCTTTCGAG..........................................................................................................................................................................................243.000.003.00---------------------
..TCTCTCTCTCTTTCTTTTTTTCTTTCTGG...........................................................................................................................................................................................................................293.000.001.00--2.00------------------
................TTTTTTTCTTTCTTCTTTCTTTCAAAG...............................................................................................................................................................................................................272.000.00--1.00--1.00----------------
........TCTCTTTCTTTTTTTCTTTCTGG...........................................................................................................................................................................................................................232.000.002.00---------------------
..........................................CTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTG..............................................................................................................................................................................342.000.00-2.00--------------------
.........................................................................TTTCTTTCTTTCTTTCTTTCTTTCCTCTTTTG.................................................................................................................................................322.000.00--2.00-------------------
.........................TTCTTCTTTCTTTCTTTCTCTGGC.........................................................................................................................................................................................................241.000.001.00---------------------
..............TCTTTTTTTCTTTCTTCTTTCTTTCTTTG...............................................................................................................................................................................................................291.000.00--1.00-------------------
................................................................................CTTTCTTTCTTTCTTTCCTAG.....................................................................................................................................................211.000.00--1.00-------------------
...................................................................................................CTCTCTCTCTCTTTTTTTTTTTCAAAG............................................................................................................................271.000.00-1.00--------------------
.....................TTCTTTCTTCTTTCTTTAAAC................................................................................................................................................................................................................211.000.00-1.00--------------------
................TTTTTTTCTTTCTTCTTATG......................................................................................................................................................................................................................201.000.00----1.00-----------------
.........................................................................TTTCTTTCTTTCTTTCTTTCTTTCCTGG.....................................................................................................................................................281.000.001.00---------------------
..................................CTTTCTTTCTCTTTCTTTCATAG.................................................................................................................................................................................................231.000.00-1.00--------------------
............TTTCTTTTTTTCTTTCTTCTTTTATG....................................................................................................................................................................................................................261.000.001.00---------------------
............................................................................................................................................................................TTTTCCTTTCTTTTTGTTTGTTG.......................................................231.000.00---1.00------------------
.............................................................................TTTCTTTCTTTCTTTCTTTCCTAG.....................................................................................................................................................241.000.00--1.00-------------------
.......................................TTTCTCTTTCTTTCTTTAGGC..............................................................................................................................................................................................211.000.00---1.00------------------
..........................................CTCTTTCTTTCTTTCTTTCTAAG.........................................................................................................................................................................................231.000.00-1.00--------------------
......TCTCTCTTTCTTTTTTTCTATC..............................................................................................................................................................................................................................221.000.00------------1.00---------
...............CTTTTTTTCTTTCTTCTGTTG......................................................................................................................................................................................................................211.000.00-1.00--------------------
.................................TCTTTCTTTCTCTTTCTTTCTTTCTTTCTAG..........................................................................................................................................................................................311.000.00---------------------1.00
.........................................TCTCTTTCTTTCTTTCTTTCTTTCTGG......................................................................................................................................................................................271.000.00---1.00------------------
........TCTCTTTCTTTTTTTCTGGTC.............................................................................................................................................................................................................................211.000.001.00---------------------
...............CTTTTTTTCTTTCTTCTTTAAG.....................................................................................................................................................................................................................221.000.00--1.00-------------------
..........................................................................................................TCTCTTTTTTTTTTTCTGGCTTG.........................................................................................................................231.000.001.00---------------------
..............TCTTTTTTTCTTTCTTCTTTCTTTAAG.................................................................................................................................................................................................................271.000.00-----1.00----------------
..............................................................................................TTCCTCTCTCTCTCTCTTTTTTTTTTTG................................................................................................................................281.000.00-1.00--------------------
..........TCTTTCTTTTTTTCTTTCTTCTTTTG......................................................................................................................................................................................................................261.000.00--1.00-------------------
........................................TTCTCTTTCTTTCTTTCTTTCTAG..........................................................................................................................................................................................241.000.00-----------1.00----------
................................................................................................CCTCTCTCTCTCTCTTTTTTTGAAT.................................................................................................................................251.000.00-----------------1.00----
........................................................................................................TCTCTCTTTTTTTTTTTCTGCCTG..........................................................................................................................241.000.001.00---------------------
.........CTCTTTCTTTTTTTCTTTCTTAAG.........................................................................................................................................................................................................................241.000.00-1.00--------------------
.............................................................................................TTTCCTCTCTCTCTCTCTTTGTGC.....................................................................................................................................241.000.00---1.00------------------
..............TCTTTTTTTCTTTCTTAAAG........................................................................................................................................................................................................................201.000.00----1.00-----------------
......TCTCTCTTTCTTTTTTTCTTTAC.............................................................................................................................................................................................................................231.000.001.00---------------------
...............................................................................TCTTTCTTTCTTTCTTTCCTAG.....................................................................................................................................................221.000.00--1.00-------------------
..............TCTTTTTTTCTTTCTTCTTTTGG.....................................................................................................................................................................................................................231.000.001.00---------------------
...........................CTTCTTTCTTTCTTTCTCTTTCTTTTAG...................................................................................................................................................................................................281.000.00--1.00-------------------
....................................TTCTTTCTCTTTCTTTCTTTCTTTCTTTCTCG......................................................................................................................................................................................321.000.00-1.00--------------------
...................................................................................................................................................................................................................AGCTTGATAATGGAGGAA.....................181.000.00--------------------1.00-
........................TTTCTTCTTTCTTTCTTTCTCTTTCTTCG.....................................................................................................................................................................................................291.000.00--1.00-------------------
.............................................................................................................................................................................TTTCCTTTCTTTTTGTTGGCT........................................................211.000.001.00---------------------
.........................................TCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTG..............................................................................................................................................................................351.000.00-1.00--------------------
......................................................................................................TCTCTCTCTTTTTTTTTTTCTGCCC...........................................................................................................................251.000.001.00---------------------
.........................................................................................TTTCTTTCCTCTCTCTCTCTCTTTTTTTCAAG.................................................................................................................................321.000.00--1.00-------------------
..TCTCTCTCTCTTTCTTTTTTTCTTTTTCC...........................................................................................................................................................................................................................291.000.00---1.00------------------
..........................................................................................................TCTCTTTTTTTTTTTCTGAGGT..........................................................................................................................221.000.001.00---------------------
..........TCTTTCTTTTTTTCTTTCTTCTTTCTTTG...................................................................................................................................................................................................................291.000.001.00---------------------
....................................TTCTTTCTCTTTCTTTCTTAGC................................................................................................................................................................................................221.000.00---1.00------------------
.........................................TCTCTTTCTTTCTTTCTTTCTTTCTATG.....................................................................................................................................................................................281.000.00--1.00-------------------
........................................TTCTCTTTCTTTCTTTCTTTCTTTCTAAG.....................................................................................................................................................................................291.000.00-1.00--------------------
....................TTTCTTTCTTCTTTCTTCCAG.................................................................................................................................................................................................................211.000.00-1.00--------------------
.............................................................................................TTTCCTCTCTCTCTCTCTTTAACC.....................................................................................................................................241.000.00---1.00------------------
....................TTTCTTTCTTCTTTCTTTCTTTCTCTCTG.........................................................................................................................................................................................................291.000.00--1.00-------------------
.......................................................................................................................................................................CATTATTTTCCTTTCTTAA................................................................191.000.00----------1.00-----------
.........CTCTTTCTTTTTTTCTACAC.............................................................................................................................................................................................................................201.000.00---1.00------------------
.........................................................................TTTCTTTCTTTCTTTCTTTCTTTCCTAAAG...................................................................................................................................................301.000.00--1.00-------------------
................TTTTTTTCTTTCTTCTTTAGC.....................................................................................................................................................................................................................211.000.001.00---------------------
..................................................................................................TCTCTCTCTCTCTTTTTTTTTTTCAATA............................................................................................................................281.000.00-----1.00----------------
.................TTTTTTCTTTCTTCTTTCTTTGAG.................................................................................................................................................................................................................241.000.00----------1.00-----------
.................TTTTTTCTTTCTTCTTTCTTTCTTG................................................................................................................................................................................................................251.000.00--1.00-------------------
........TCTCTTTCTTTTTTTCTTTCTCGG..........................................................................................................................................................................................................................241.000.00---1.00------------------
..........TCTTTCTTTTTTTCTTTGGAG...........................................................................................................................................................................................................................211.000.001.00---------------------
............................................................................................................................................................................TTTTCCTTTCTTTTTGTTGGC.........................................................211.000.001.00---------------------
.........................................................................................TTTCTTTCCTCTCTCTCTCTCTTTTTTTTCAAG................................................................................................................................331.000.00--1.00-------------------
..................................CTTTCTTTCTCTTTCTTTCTTAG.................................................................................................................................................................................................231.000.00--1.00-------------------
...................TTTTCTTTCTTCTTTCTTTCTAAG...............................................................................................................................................................................................................241.000.00--1.00-------------------
..............TCTTTTTTTCTTTCTTCTTTCTG.....................................................................................................................................................................................................................231.000.001.00---------------------
...................TTTTCTTTCTTCTTTCTTTCTTTAG..............................................................................................................................................................................................................251.000.00-1.00--------------------
.............TTCTTTTTTTCTTTCTTCTGAG.......................................................................................................................................................................................................................221.000.00---1.00------------------
....................................................................................CTTTCTTTCTTTCCTCTTTAG.................................................................................................................................................211.000.00-1.00--------------------
....................................................................................................TCTCTCTCTCTTTTTTTTTTGGTT..............................................................................................................................241.000.00---1.00------------------
.............................................................................TTTCTTTCTTTCTTTCTTTCCTCTAG...................................................................................................................................................261.000.00--1.00-------------------
.................................................................................................................................................................................................................TCAGCTTGATAATGGGG........................171.000.00-------------1.00--------
................................................................................CTTTCTTTCTTTCTTTCCTCCTTG..................................................................................................................................................241.000.00-1.00--------------------
........TCTCTTTCTTTTTTTCTGCCC.............................................................................................................................................................................................................................211.000.001.00---------------------
..........TCTTTCTTTTTTTCTTTCTAATT.........................................................................................................................................................................................................................231.000.001.00---------------------
..........................................CTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCAAG..............................................................................................................................................................................341.000.00----1.00-----------------
...............CTTTTTTTCTTTCTTCAAG........................................................................................................................................................................................................................191.000.00----1.00-----------------
...............CTTTTTTTCTTTCTTCTTTCTTTAAG.................................................................................................................................................................................................................261.000.00--1.00-------------------
...............CTTTTTTTCTTTCTTCTTTCTTTTTGG................................................................................................................................................................................................................271.000.001.00---------------------
..............TCTTTTTTTCTTTCTTCTTTTTTG....................................................................................................................................................................................................................241.000.00-1.00--------------------
..............................CTTTCTTTCTTTCTCTTTCTTTCTCAG.................................................................................................................................................................................................271.000.00-1.00--------------------
................................................................................................................................................................................................................ATCAGCTTGATAATGTTT........................181.000.00------------------1.00---
...........................................................................................................................................................................ATTTTCCTTTCTTTTTGTTTC..........................................................211.000.00---1.00------------------
....TCTCTCTCTTTCTTTTTTTCTTCAG.............................................................................................................................................................................................................................251.000.00-1.00--------------------
..............................................................................................................TTTTTTTTTTTCTGGAGGTTG.......................................................................................................................211.000.001.00---------------------
......................................................................................................TCTCTCTCTTTTTTTTTTTCGCT.............................................................................................................................231.000.001.00---------------------
......................TCTTTCTTCTTTCTTTCTTTGAGA............................................................................................................................................................................................................241.000.00---1.00------------------
..TCTCTCTCTCTTTCTTTTTTTCTTTCTCTTG.........................................................................................................................................................................................................................311.000.00-1.00--------------------
..........................................................................................................TCTCTTTTTTTTTTTCTGAGTT..........................................................................................................................221.000.00---1.00------------------
..TCTCTCTCTCTTTCTTTTTTTCTTTCTG............................................................................................................................................................................................................................281.000.001.00---------------------
.................................................................................TTTCTTTCTTTCTTTCCTCTTCCG.................................................................................................................................................241.000.00--1.00-------------------
..........................................................................................................TCTCTTTTTTTTTTTCTGGAGATGG.......................................................................................................................251.000.00---1.00------------------
..............................................................................................................TTTTTTTTTTTCTGGAGGGGG.......................................................................................................................211.000.00---1.00------------------
..................................................................................TTCTTTCTTTCTTTCCTCTTCCG.................................................................................................................................................231.000.00----------1.00-----------
.............................................................................................................CTTTTTTTTTTTCTGGCGTA.........................................................................................................................201.000.00-----------1.00----------
......TCTCTCTTTCTTTTTTTCTGGTC.............................................................................................................................................................................................................................231.000.001.00---------------------
.CTCTCTCTCTCTTTCTTTTTTTAT.................................................................................................................................................................................................................................241.000.00-1.00--------------------
............TTTCTTTTTTTCTTTCTTCTTTCTCAG...................................................................................................................................................................................................................271.000.00--1.00-------------------
..............................CTTTCTTTCTTTCTCTTTCTTTAAG...................................................................................................................................................................................................251.000.00--1.00-------------------
..........................................CTCTTTCTTTCTTTCTTTCTTCTTG.......................................................................................................................................................................................251.000.00--1.00-------------------
......................................................................................................TCTCTCTCTTTTTTTTTTTCTGG.............................................................................................................................2350.400.400.20--0.20------------------
....................................................................................................TCTCTCTCTCTTTTTTTTTTTCTGG.............................................................................................................................2530.330.330.33---------------------
......................................................................................................TCTCTCTCTTTTTTTTTTTCTGGTT...........................................................................................................................2550.200.400.20---------------------

Antisense strand
TCTCTCTCTCTCTTTCTTTTTTTCTTTCTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTCTCTCTCTCTCTTTTTTTTTTTCTGGAGAAGAGTGGTTTAAAAGGGAGTTGAATATAACAGAGCACCTCATTATTTTCCTTTCTTTTTGTTTGCTAACTAGGAAAGTCCATCAGCTTGATAATGGAGGAGAACAATGACTCCACGGAGAAC
..............................................................................(((...((..((((....((.((((.(((((..............))))))))).))....))))..))..)))........((((...((.................))..))))........................................................
...................................................................68..................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189785SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040009(GSM532894)
G727T. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...................................................TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTC...................................................................................................................................................................... 336.000.00--------6.00-------------
..............................................................................................................TTTTTTTTTTTCTGGCGTG......................................................................................................................... 194.000.00---------4.00------------
................................TTCTTTCTTTCTCTTTCTTTCTAC.................................................................................................................................................................................................. 241.000.00----------------1.00-----
..............................................................................................................TTTTTTTTTTTCTGGAGAAATTT..................................................................................................................... 231.000.00--------------1.00-------
.....................................................................................................................................................................................................................................AACAATGACTCCACGG..... 161.000.00---------------1.00------
................................................................................................................................................................AGGAAAATAATGAGGTGCT....................................................................... 1911.001.00-------------------1.00--