ID: uc003hpg.2_intron_3_0_chr4_85925481_f.5p
GENE: WDFY3-AS2(4)
chr4:85925431-85925680+


(1)
AGO1.ip
(1)
AGO2.ip
(2)
B-CELL
(1)
BREAST
(9)
CELL-LINE
(3)
CERVIX
(3)
HEART
(1)
HELA
(4)
LIVER
(1)
OTHER
(4)
SKIN
(1)
TESTES
(4)
UTERUS

Sense strand
AAACCAAATCTCCTGGCACCTTGATCTTGGATTTTACAGCCTCCAGAACTGTGAGAAAATAAATTTCTGTTCTTTATAAATTACTCAATCTCATGTACTTTGCTATAGCAGCAGGAACAAACTAAGATTATTTGAAATATATTATACATGGTTGGGCACGGTGGCTCATGCTTGCAATCCCAGTACTTTGGGAGGCTGAGGTGGGTGGTAGATCACTTGAGGTCAGGAGTTCAACACCAGCCTGGCCAAC
....................................................................................................((((.....))))....................................((((((((......))))).)))..............................................................................
....................................................................................................101.....................................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR189783SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM532874(GSM532874)
G699T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR040022(GSM532907)
G575N. (cervix)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR191431(GSM715541)
168genomic small RNA (size selected RNA from . (breast)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR040035(GSM532920)
G001T. (cervix)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.........................................................................................................TAGCAGCAGGAACAATTC...............................................................................................................................1814.000.003.005.005.00--1.00------------------------------
.........................................................................................................TAGCAGCAGGAACAATTG...............................................................................................................................186.000.005.001.00----------------------------------
.........................................................................................................TAGCAGCAGGAACAAATC...............................................................................................................................185.000.00-2.002.00----1.00----------------------------
.........................................................................................................TAGCAGCAGGAACAATTCT..............................................................................................................................193.000.00-2.00---1.00------------------------------
.........................................................................................................TAGCAGCAGGAACAATT................................................................................................................................173.000.00-1.00---1.00-1.00----------------------------
.........................................................................................................TAGCAGCAGGAACAACTC...............................................................................................................................183.000.00--1.00--1.00-1.00----------------------------
.........................................................................................................TAGCAGCAGGAACAAATCT..............................................................................................................................192.000.002.00-----------------------------------
.........................................................................................................TAGCAGCAGGAACAAAT................................................................................................................................172.000.001.001.00----------------------------------
.........................................................................................................TAGCAGCAGGAACAAGTC...............................................................................................................................182.000.00-1.001.00---------------------------------
.........................................................................................................TAGCAGCAGGAACAAATTT..............................................................................................................................192.000.002.00-----------------------------------
............................................................................................................................................................................................TGGGAGGCTGAGGTGGGTGGTCGGA.....................................252.000.00---2.00--------------------------------
................................................................................................................................................................................................................................AGGAGTTCAACACCAGCCTCCAC...231.000.00---1.00--------------------------------
............................................................................................................................AGATTATTTGAAATAGGAT...........................................................................................................191.000.00---------1.00--------------------------
.........................................................................................................TAGCAGCAGGAACAAATCCA.............................................................................................................................201.000.001.00-----------------------------------
.........................................................................................................TAGCAGCAGGAACAAATCTA.............................................................................................................................201.000.001.00-----------------------------------
........................................................................................................................................................................................................................TTGAGGTCAGGAGTTCAACACCAGCCGGTC....301.000.00--------1.00---------------------------
.........................................................................................................TAGCAGCAGGAACAACTCT..............................................................................................................................191.000.00-1.00----------------------------------
.........................................................................................................TAGCAGCAGGAACAATGTG..............................................................................................................................191.000.001.00-----------------------------------
.......................................................................................................................................................................................TACTTTGGGAGGCTGAGGTGGATA...........................................241.000.00--------------1.00---------------------
.........................................................................................................TAGCAGCAGGAACAAATCTT.............................................................................................................................201.000.001.00-----------------------------------
....................................................................................................................................................TGGTTGGGCACGGTGGCTTGC.................................................................................211.000.00-----------------------------1.00------
.........................................................................................................TAGCAGCAGGAACAAACCTG.............................................................................................................................201.000.001.00-----------------------------------
.........................................................................................................TAGCAGCAGGAACAATTAG..............................................................................................................................191.000.001.00-----------------------------------
...................................................................................................................................................................................CCAGTACTTTGGGAGGCTGAGGTG...............................................2401.001.00----------------------------------1.00-
....................................................................................................................................................................................................TGAGGTGGGTGGTAGATTAG..................................201.000.00----1.00-------------------------------
.........................................................................................................TAGCAGCAGGAACAAATCAG.............................................................................................................................201.000.00----------------1.00-------------------
.........................................................................................................TAGCAGCAGGAACAACTGT..............................................................................................................................191.000.00--1.00---------------------------------
.........................................................................................................TAGCAGCAGGAACAATTAT..............................................................................................................................191.000.00-1.00----------------------------------
.........................................................................................................TAGCAGCAGGAACAAATTTG.............................................................................................................................201.000.001.00-----------------------------------
..............................................................................................................................................................................................................GGTAGATCACTTGAGGTCAGGAGT....................2401.001.00-----------1.00------------------------
.........................................................................................................TAGCAGCAGGAACAACTTT..............................................................................................................................191.000.00--1.00---------------------------------
.........................................................................................................TAGCAGCAGGAACAAATAA..............................................................................................................................191.000.00----1.00-------------------------------
.........................................................................................................TAGCAGCAGGAACAATTTT..............................................................................................................................191.000.001.00-----------------------------------
.........................................................................................................TAGCAGCAGGAACAAGGCG..............................................................................................................................191.000.00----1.00-------------------------------
.........................................................................................................TAGCAGCAGGAACAACTT...............................................................................................................................181.000.00-1.00----------------------------------
...................................................................................................................................................................................CCAGTACTTTGGGAGGCTGAGGT................................................2301.001.00---------------------------1.00--------
.........................................................................................................TAGCAGCAGGAACAAAAAAA.............................................................................................................................201.000.00-------------------------1.00----------
.........................................................................................................TAGCAGCAGGAACAAATCGT.............................................................................................................................201.000.001.00-----------------------------------
....................................................................................................................................................................................................TGAGGTGGGTGGTAGTAG....................................181.000.001.00-----------------------------------
.........................................................................................................TAGCAGCAGGAACAAATCTG.............................................................................................................................201.000.001.00-----------------------------------
...........................................CAGAACTGTGAGAAAAT..............................................................................................................................................................................................1701.001.00-----------1.00------------------------

Antisense strand
AAACCAAATCTCCTGGCACCTTGATCTTGGATTTTACAGCCTCCAGAACTGTGAGAAAATAAATTTCTGTTCTTTATAAATTACTCAATCTCATGTACTTTGCTATAGCAGCAGGAACAAACTAAGATTATTTGAAATATATTATACATGGTTGGGCACGGTGGCTCATGCTTGCAATCCCAGTACTTTGGGAGGCTGAGGTGGGTGGTAGATCACTTGAGGTCAGGAGTTCAACACCAGCCTGGCCAAC
....................................................................................................((((.....))))....................................((((((((......))))).)))..............................................................................
....................................................................................................101.....................................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR189783SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM532874(GSM532874)
G699T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR040022(GSM532907)
G575N. (cervix)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR191431(GSM715541)
168genomic small RNA (size selected RNA from . (breast)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR040035(GSM532920)
G001T. (cervix)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
....................................................................................................................................................................................................................................GTTCAACACCAGCCTGGCCAAATC 243.000.00------3.00-----------------------------
..........................................................................................................................................................................................................................................CACCAGCCTGGCCAACGGGA 202.000.00---------2.00--------------------------
.................................................................................................................................................................................................................................AGGCTGGTGTTGAACTCC....... 1802.002.00----------2.00-------------------------
..................................................GTGAGAAAATAAATTTCTGTTCCACC.............................................................................................................................................................................. 261.000.00---------------------------------1.00--
............................................................................................................................AGATTATTTGAAATATACTAG......................................................................................................... 211.000.00----1.00-------------------------------
..................................................................................................................................................................................................................................GAGTTCAACACCAGCCTGGCCAACTG 261.000.00-------------------------------1.00----
............................................................................................................................................................................................................................GGTCAGGAGTTCAACACCAGCCTGGCCAACAGG 331.000.00--------1.00---------------------------
.......................................................................................................................................................................................................................................TTGGCCAGGCTGGTGTTG. 1801.001.00------------------------------1.00-----
...................................................................................................................................................................GCTCATGCTTGCAATCCTCTG.................................................................. 211.000.00-------------1.00----------------------
..................................................................................................................................................................................................................................GAGTTCAACACCAGCCTGGCTG.. 221.000.00--------------------------------1.00---
................................................................................................................................................................................................................................AGGAGTTCAACACCAGCCAATA.... 221.000.00------------1.00-----------------------
....................................................................................................................................................................................................................................GTTCAACACCAGCCTGGCCC.. 201.000.00------------------1.00-----------------
..............................................................................................................................................................................................................................TCAGGAGTTCAACACCAGCCTGGCTA.. 261.000.00---------------1.00--------------------
................................................................................................................................................................................................................TAGATCACTTGAGGTCAGGAGTTGGCA............... 271.000.00---1.00--------------------------------
....................................................................................................................................................................................................................................GTTCAACACCAGCCTGGAA... 191.000.00------------------------1.00-----------
............................................................................................................................................................CACGGTGGCTCATGCTTGCAATCCCACC.................................................................. 281.000.00------------1.00-----------------------
.....................................................................................................................................................................................................................................TTCAACACCAGCCTGAAA... 181.000.00-----------------------1.00------------
...................................................................................................................................................................................................................................AGTTCAACACCAGCCTTCAG... 201.000.00----------------------1.00-------------
...................................................................................................................................................................GCTCATGCTTGCAATCCCTCTG................................................................. 221.000.00-----------------1.00------------------
....................................................................................................................................................................................................................................GTTCAACACCAGCCTGCCC... 191.000.00--------------------1.00---------------
..............................................................................................................................................................................CAATCCCAGTACTTTGGGGCC....................................................... 211.000.00--------------------------1.00---------
...................................................................................................................................................................................CCAGTACTTTGGGAGGCTGAGGTGGGTGAT......................................... 301.000.00-------------------1.00----------------
......................................GCCTCCAGAACTGTGAGAAAGAC............................................................................................................................................................................................. 231.000.00---1.00--------------------------------
............................................................................................................................................................................................................................TGGTGTTGAACTCCTGACC........... 1901.001.00---------------------1.00--------------
...............................................................................................................................................................................................................GTAGATCACTTGAGGGGT......................... 181.000.00----------------------------1.00-------
.........................................................................................................................................................GGGCACGGTGGCTCATGCTTGCAATCCCAGCGC................................................................ 331.000.00--------1.00---------------------------
..................................................................................................................................................................TACTGGGATTGCAAGCATGAGCC................................................................. 2340.250.25-----------------------------------0.25