ID: uc003hpd.2_intron_27_0_chr4_85658520_r.3p
GENE: (40)
chr4:85658470-85658719-


(2)
BREAST
(4)
CELL-LINE
(3)
HEART
(1)
KIDNEY
(1)
OTHER
(5)
SKIN

Sense strand
TTTCTAAATAGGCAACCACAGTTTCAGTTGTCTAAATAACCTTTTCACTGGGCTAGATACAACATGAGCTTTGTTTTTTTTACATTAAATACTGTAGTCGAAATTCCCACATGTAAACATGAAGAAAAATAAAAACTAACTTTATACTGTGTTTTGATCATTTGCTTACTTTTTTGTTTGTTTGTTTGTTTGTTTACTAGGGCGTCAGCTTCTCATAAAAGCTGTCAACAGAGTTTGGACTGAACTGATA
................................................................................................................(((((((...(((.(((((((...............(((.......)))...............))))))).)))...))))))).....................................................
..............................................................................................................111......................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
TAX577740(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
TAX577743(Rovira)
total RNA. (breast)
.........................................................................................................................................................................TTTTTTGTTTGTTTGTTTGTTTGTTAGAG....................................................294.000.004.00---------------
.......................................................................................................................................................................ACTTTTTTGTTTGTTTGTTTGTTTCTG........................................................273.000.002.00-1.00-------------
...........................................................................................................................................................................TTTTGTTTGTTTGTTTGTTTGTCCTC.....................................................263.000.002.001.00--------------
.........................................................................................................................................................................TTTTTTGTTTGTTTGTTTGTTTGTTCCTG....................................................293.000.00-1.002.00-------------
............................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTCTCG.....................................................252.000.00-2.00--------------
.........................................................................................................................................................................TTTTTTGTTTGTTTGTTTGTTTGTCTGC.....................................................282.000.002.00---------------
.............................................................................................................................................................................TTGTTTGTTTGTTTGTTTGTCTCG.....................................................242.000.001.001.00--------------
.........................................................................................................................................................................TTTTTTGTTTGTTTGTTTGTTTGTTTCTCG...................................................302.000.002.00---------------
............................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTCCTT.....................................................252.000.002.00---------------
......................................................................................................................................................................TACTTTTTTGTTTGTTTGTTTGTTTC..........................................................262.000.002.00---------------
...........................................................................................................................................................................TTTTGTTTGTTTGTTTGTTTGTCCTT.....................................................262.000.00-2.00--------------
.........................................................................................................................................................................TTTTTTGTTTGTTTGTTTGTTTGTTCGG.....................................................282.000.002.00---------------
........................................................................................................................................................................CTTTTTTGTTTGTTTGTTTGTTTCTAC.......................................................272.000.002.00---------------
..........................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTCTGC.....................................................272.000.002.00---------------
.........................................................................................................................................................................TTTTTTGTTTGTTTGTTTGTTTGTTCTCG....................................................292.000.001.001.00--------------
.........................................................................................................................................................................TTTTTTGTTTGTTTGTTTGTTTGTTCTGC....................................................292.000.002.00---------------
.............................................................................................................................................................................TTGTTTGTTTGTTTGTTTGTTTACGAC..................................................272.000.001.001.00--------------
...........................................................................................................................................................................................................................AGCTGTCAACAGAGTTTGGACTGAACTA...281.000.00-----1.00----------
....................................................................................................................................................................CTTACTTTTTTGTTTGTTTAT.................................................................211.000.00--1.00-------------
........................................................................................................................................................................CTTTTTTGTTTGTTTGTTTGTCGTC.........................................................251.000.001.00---------------
.......................................................................................................................................................................ACTTTTTTGTTTGTTTGTTCTTC............................................................231.000.001.00---------------
.......................................................................................................................................................................ACTTTTTTGTTTGTTTGTTTCTCT...........................................................241.000.001.00---------------
.........................................................................................................................................................................TTTTTTGTTTGTTTGTTTGTTTGTTTCCGC...................................................301.000.001.00---------------
..........................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTTTACG....................................................281.000.00-1.00--------------
......................................................................................................................................................................TACTTTTTTGTTTGTTTGTTTGCCTG..........................................................261.000.00-1.00--------------
......................................................................................................................................................................................................................ATAAAAGCTGTCAACAGAGTTTGGACTGAAC.....3111.001.00-------------1.00--
................................................................................................................................................................................TTTGTTTGTTTGTTTGTTTACTATCCC...............................................271.000.00-1.00--------------
...........................................................................................................................................................................TTTTGTTTGTTTGTTTGTTTGTCCGT.....................................................261.000.001.00---------------
..........................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTCCCC.....................................................271.000.001.00---------------
.........................................................................................................................................................................TTTTTTGTTTGTTTGTTTGTTTGTTTCTTC...................................................301.000.001.00---------------
...........................................................................................................................................................................TTTTGTTTGTTTGTTTGTTTGTTCCTG....................................................271.000.001.00---------------
.........................................................................................................................................................................................................................AAAGCTGTCAACAGAGTTTGGACTGAACT....2911.001.00---1.00------------
..............................................................................................................................................................................TGTTTGTTTGTTTGTTTGTTTACGG...................................................251.000.001.00---------------
..............................................................................................................................................................................TGTTTGTTTGTTTGTTTGTTTACGGG..................................................261.000.001.00---------------
.........................................................................................................................................................................TTTTTTGTTTGTTTGTTTGTTTGTTCAG.....................................................281.000.00-1.00--------------
.........................................................................................................................................................................TTTTTTGTTTGTTTGTTTGTTTGTATGG.....................................................281.000.00--1.00-------------
.........................................................................................................................................................................TTTTTTGTTTGTTTGTTTGTTTGTTTCGC....................................................291.000.001.00---------------
..........................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTTTACACT..................................................301.000.001.00---------------
............................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTTTACGGG..................................................281.000.001.00---------------
..........................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTTCTCT....................................................281.000.00-1.00--------------
........................................................................................................................................................................CTTTTTTGTTTGTTTGTTTGTTTGTTTAGATG..................................................321.000.001.00---------------
.........................................................................................................................................................................TTTTTTGTTTGTTTGTTTGTTTGTTTCGG....................................................291.000.00--1.00-------------
.......................................................................................................................................................................ACTTTTTTGTTTGTTTGTTTGGTTT..........................................................251.000.00-1.00--------------
.........................................................................................................................................................................TTTTTTGTTTGTTTGTTTGTTTGTTTCGTG...................................................301.000.00-1.00--------------
...........................................................................................................................................................................TTTTGTTTGTTTGTTTGTTTGTCTCG.....................................................261.000.001.00---------------
...........................................................................................................................................................................TTTTGTTTGTTTGTTTGTTTGTTCGTC....................................................271.000.00-1.00--------------
...................................................................................................................AACATGAAGAAAAATCGA.....................................................................................................................181.000.00---------------1.00
........................................................................................................................................................................CTTTTTTGTTTGTTTGTTTGTTTGTTTCTTG...................................................311.000.001.00---------------
...........................................................................................................................................................................TTTTGTTTGTTTGTTTGTTTGTTCTCG....................................................271.000.001.00---------------
...........................................................................................................................................................................TTTTGTTTGTTTGTTTGTTTGTCATG.....................................................261.000.00-1.00--------------
......................................................................................................................................................................TACTTTTTTGTTTGTTCGAG................................................................201.000.00-1.00--------------
.......................................................................................................................................................................ACTTTTTTGTTTGTTTGTTTGTTCTTG........................................................271.000.00-1.00--------------
.......................................................................................................................................................................ACTTTTTTGTTTGTTTGTTCGAG............................................................231.000.001.00---------------
..........................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTTCGGC....................................................281.000.00-1.00--------------
........................................................................................................................................................................CTTTTTTGTTTGTTTGTTTGTTTGTTCC......................................................281.000.00-1.00--------------
..........................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTTCCGG....................................................281.000.001.00---------------
..........................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTTCGTC....................................................281.000.00-1.00--------------
.....................................................................................................................................................................TTACTTTTTTGTTTGTTTGTTTCCTG...........................................................261.000.001.00---------------
............................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTTTACTCAG.................................................291.000.001.00---------------
.........................................................................................................................................................................TTTTTTGTTTGTTTGTTTGTTTGTTTATCTT..................................................311.000.00-1.00--------------
..........................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTTCCG.....................................................271.000.001.00---------------
............................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTTTACTTTG.................................................291.000.001.00---------------
...........................................................................................................................................................................TTTTGTTTGTTTGTTTGTTTGTTCTCC....................................................271.000.00-1.00--------------
.........................................................................................................................................................................TTTTTTGTTTGTTTGTTTGTTTGTTCGTC....................................................291.000.00-1.00--------------
.............................................................................................................................................................................................................................CTGTCAACAGAGTTTGGACTGAAC.....2411.001.00--------1.00-------
.........................................................................................................................................................................TTTTTTGTTTGTTTGTTTGTTTGTTCAGG....................................................291.000.00-1.00--------------
.........................................................................................................................................................................TTTTTTGTTTGTTTGTTTGTTTGTTCATC....................................................291.000.001.00---------------
.........................................................................................................................................................................TTTTTTGTTTGTTTGTTTGTTTGTTCGTA....................................................291.000.001.00---------------
.........................................................................................................................................................................TTTTTTGTTTGTTTGTTTGTTTGTTCTTC....................................................291.000.00-1.00--------------
...................................................................................................................AACATGAAGAAAAATCATT....................................................................................................................191.000.00-----------1.00----
..........................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTTCCC.....................................................271.000.00-1.00--------------
.........................................................................................................................................................................TTTTTTGTTTGTTTGTTTGTTTGTTTAGTAG..................................................311.000.001.00---------------
.........................................................................................................................................................................TTTTTTGTTTGTTTGTTTGTTTGTTTACGGG..................................................311.000.001.00---------------
............................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTCTAC.....................................................251.000.001.00---------------
.........................................................................................................................................................................................................................AAAGCTGTCAACAGAGTTTGGACTGA.......2611.001.00-------1.00--------
............................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTTTACTCTG.................................................291.000.00--1.00-------------
..........................................................................................................................................................................TTTTTGTTTGTTTGTTTGTTTGTTCCTG....................................................281.000.00-1.00--------------
............................................................................................................................................................................TTTGTTTGTTTGTTTGTTTGTTTACTAG..................................................2820.500.50---0.50------------

Antisense strand
TTTCTAAATAGGCAACCACAGTTTCAGTTGTCTAAATAACCTTTTCACTGGGCTAGATACAACATGAGCTTTGTTTTTTTTACATTAAATACTGTAGTCGAAATTCCCACATGTAAACATGAAGAAAAATAAAAACTAACTTTATACTGTGTTTTGATCATTTGCTTACTTTTTTGTTTGTTTGTTTGTTTGTTTACTAGGGCGTCAGCTTCTCATAAAAGCTGTCAACAGAGTTTGGACTGAACTGATA
................................................................................................................(((((((...(((.(((((((...............(((.......)))...............))))))).)))...))))))).....................................................
..............................................................................................................111......................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
TAX577740(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
TAX577743(Rovira)
total RNA. (breast)
.......................................................................TGTTTTTTTTACATTGACC................................................................................................................................................................ 192.000.00----1.00-----1.00-----
.........................................................................TTTTTTTTACATTAAATAG.............................................................................................................................................................. 191.000.00------1.00---------
...............................................................................................AGTCGAAATTCCCACAGC......................................................................................................................................... 181.000.00---------1.00------
...........................................TTCACTGGGCTAGATGG.............................................................................................................................................................................................. 171.000.00-1.00--------------
..................................................................AGCTTTGTTTTTTTTATGA..................................................................................................................................................................... 191.000.00------------1.00---
........................................................................................................................................................................................................................AAAAGCTGTCAACAGACGC............... 191.000.00--------------1.00-
...................................................................................................................AACATGAAGAAAAATAGG..................................................................................................................... 181.000.00-1.00--------------