ID: uc003hlx.1_intron_11_0_chr4_80957187_r.3p
GENE: ANTXR2(6)
chr4:80957137-80957386-


(9)
CELL-LINE
(1)
CERVIX
(2)
HEART
(1)
HELA
(1)
LIVER
(2)
OTHER

Sense strand
ATAATCTTAAAATATACCCTGAAATACAGTGCAGAAGTTTCCTAAGAACTTGGTAGCTGTACACGCTATAGTTAATAGATTTTCTCTGAGATCTATTGAAGTATGGAGAAGACCTCAAGGTTATTACTAATCTTATAATTTACTTCACATTGTAATTTTAGATCTATAGCTTGGTAATCTTTTTTTTTTTTCTTTTTTAGATACTAGCTCAGTCATGTACTGAAATCCTAGAATTGCAGCCCTCAAGTGT
...........................................................................................((((..((((...((((((((.....(((((((..((((..(((((((.........)))))))..))))....))))))).....))))))))......))))..)))).................................................
...........................................................................................92................................................................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784SRR040028(GSM532913)
G026N. (cervix)
SRR189782SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
.................................................................................................................................................................................TCTTTTTTTTTTTTCTTTTTTAAAG................................................258.000.00--1.005.00-1.001.00---------
..............................................................................................................................................................................TAATCTTTTTTTTTTTTCTTTAAG....................................................247.000.00---5.00-2.00----------
...............................................................................................................................................................................AATCTTTTTTTTTTTTCTCG.......................................................206.000.00--1.003.001.001.00----------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTCG.......................................................193.000.00---1.00-2.00----------
..............................................................................................................................................................................TAATCTTTTTTTTTTTTCTTTAAT....................................................243.000.00---1.001.001.00----------
.................................................................................................................................................................................TCTTTTTTTTTTTTCTTTTTTAATTG...............................................263.000.00--2.00-1.00-----------
.................................................................................................................................................................................TCTTTTTTTTTTTTCTTTTTCCAG.................................................243.000.00--3.00-------------
...............................................................................................................................................................................AATCTTTTTTTTTTTTCTTTTTGGT..................................................253.000.003.00---------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTTGTGG.................................................253.000.00-3.00--------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTGGAG..................................................243.000.001.002.00--------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTGGTT..................................................242.000.002.00---------------
..............................................................................................................................................................................TAATCTTTTTTTTTTTTCTTTTTTTTTG................................................282.000.00---1.001.00-----------
.................................................................................................................................................................................TCTTTTTTTTTTTTCTTTTTTAATG................................................252.000.00--1.00--1.00----------
................................................................................................TGAAGTATGGAGAAGGGG........................................................................................................................................182.000.00-------2.00--------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTTGGC..................................................242.000.001.001.00--------------
..................................................................................................................................................................................CTTTTTTTTTTTTCTTTTTTACAG................................................242.000.00----1.001.00----------
...............................................................................................................................................................................AATCTTTTTTTTTTTTCTTTTTGG...................................................242.000.002.00---------------
.................................................................................................................................................................................TCTTTTTTTTTTTTCTTTTTTAATT................................................252.000.00--1.00--1.00----------
.........................................................................................................................................................................................................................................TTGCAGCCCTCAAGTACTG191.000.00---------1.00------
...........................................................................................................................................................................................................CTAGCTCAGTCATGTACTG............................1911.001.00------------1.00---
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTTCG...................................................231.000.00--1.00-------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCGAGC......................................................201.000.001.00---------------
...............................................................................................................................................................................AATCTTTTTTTTTTTTCTTTTGGGT..................................................251.000.001.00---------------
...............................................................................................................................................................................AATCTTTTTTTTTTTTCTTTGGTT...................................................241.000.001.00---------------
..............................................................................................................................................................................TAATCTTTTTTTTTTTTCTTTTTTAG..................................................2611.001.00----1.00-----------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTTCAAG.................................................251.000.00--1.00-------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTTTAAAG................................................261.000.00------1.00---------
...............................................................................................................................................................................AATCTTTTTTTTTTTTCTGGGA.....................................................221.000.001.00---------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTTTCTG.................................................251.000.00--1.00-------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTTCTC..................................................241.000.00-1.00--------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTGAC...................................................231.000.001.00---------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTGGGT...................................................231.000.001.00---------------
..................................................................................................................................................................................CTTTTTTTTTTTTCTTTTTTAAACG...............................................251.000.00--1.00-------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTGGG....................................................221.000.00-1.00--------------
..............................................................................................................................................................................TAATCTTTTTTTTTTTTCTTTTTTA...................................................2511.001.00--1.00-------------
.................................................................................................................................................................................TCTTTTTTTTTTTTCTTTTTTAAATG...............................................261.000.00------1.00---------
.............................................................................................TATTGAAGTATGGAGATGGA.........................................................................................................................................201.000.00----------1.00-----
...............................................................................................................................................................................AATCTTTTTTTTTTTTCTTTTGGT...................................................241.000.001.00---------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTTAG...................................................231.000.001.00---------------
..............................................................................................................................................................................TAATCTTTTTTTTTTTTATAG.......................................................211.000.00-----1.00----------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTCATG..................................................241.000.00----1.00-----------
..................................................................................................................................................................................CTTTTTTTTTTTTCTTTTTTAAGT................................................241.000.00------1.00---------
..................................................................................................................................................................................CTTTTTTTTTTTTCTTTTTTACC.................................................231.000.001.00---------------
..............................................................................................................................................................................TAATCTTTTTTTTTTTTCTTTTAG....................................................241.000.00--1.00-------------
.................................................................................................................................................................................TCTTTTTTTTTTTTCTTTTTCTCG.................................................241.000.00--1.00-------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTGCAG..................................................241.000.00-1.00--------------
.................................................................................................................................................................................TCTTTTTTTTTTTTCTTTTTTATGAC...............................................261.000.00-1.00--------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTTGAGG.................................................251.000.001.00---------------
........................................................................................................................................................................................................ATACTAGCTCAGTCATGTACT.............................2111.001.00-------------1.00--
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTGGTC..................................................241.000.001.00---------------
...........................................................................................................................................................................TGGTAATCTTTTTTTTTTTTTGA........................................................231.000.001.00---------------
.................................................................................................................................................................................TCTTTTTTTTTTTTCTTTTTTATAA................................................251.000.00-----1.00----------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTATG....................................................221.000.00-1.00--------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCGGTC......................................................201.000.001.00---------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTTTGGTG................................................261.000.001.00---------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTAGGC...................................................231.000.00-1.00--------------
...............................................................................................................................................................................AATCTTTTTTTTTTTTCTTTTGGA...................................................241.000.00-1.00--------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTTTCCG.................................................251.000.00--1.00-------------
.................................................................................................................................................................................TCTTTTTTTTTTTTCTTTTTTAAAAG...............................................261.000.00------1.00---------
...............................................................................................................................................................................AATCTTTTTTTTTTTTCTTCGCC....................................................231.000.00-1.00--------------
...................................................................................................................................................CATTGTAATTTTAGATACG....................................................................................191.000.00-----------1.00----
...................................................................................................................................................................................TTTTTTTTTTTTCTTTTTTATCT................................................231.000.00------1.00---------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTGGTA..................................................241.000.001.00---------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTTTGGC.................................................251.000.001.00---------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTGGTG...................................................231.000.00-1.00--------------
.................................................................................................................................................................................TCTTTTTTTTTTTTCTTTTTTAACTT...............................................261.000.00----1.00-----------
..................................................................................................................................................................................CTTTTTTTTTTTTCTTTTTTAAAGG...............................................251.000.001.00---------------
.................................................................................................................................................................................TCTTTTTTTTTTTTCTTTTTTAAT.................................................241.000.00----1.00-----------
...............................................................................................................................................................................AATCTTTTTTTTTTTTCTTTTGCT...................................................241.000.001.00---------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTGAGC..................................................241.000.00-1.00--------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTGCC...................................................231.000.001.00---------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTTTGGAG................................................261.000.001.00---------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTTTAATT................................................261.000.001.00---------------
..................................................................................................................................................................................CTTTTTTTTTTTTCTTTTTTAAAAG...............................................251.000.00----1.00-----------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTTTGGG.................................................251.000.001.00---------------
..............................................................................................................................................................................TAATCTTTTTTTTTTTTCTTTTTTTAT.................................................271.000.00----1.00-----------
...................................................................................................................................................................................TTTTTTTTTTTTCTTTTTTATTGG...............................................241.000.00------1.00---------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTTTCGGC................................................261.000.00-1.00--------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTTTCTGA................................................261.000.001.00---------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTTGTA..................................................241.000.001.00---------------
..............................................................................................................................................................................TAATCTTTTTTTTTTTTATG........................................................201.000.00--1.00-------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTTGGGT.................................................251.000.001.00---------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTTTATT.................................................251.000.001.00---------------
...............................................................................................................................................................................AATCTTTTTTTTTTTTCTTTTGG....................................................231.000.001.00---------------
...............................................................................................................................................................................AATCTTTTTTTTTTTTCTTTTGGTT..................................................251.000.001.00---------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTTTGGAC................................................261.000.00-1.00--------------
.................................................................................................................................................................................TCTTTTTTTTTTTTCTTTTTCCG..................................................231.000.00---1.00------------
..............................................................................................................................................................................TAATCTTTTTTTTTTTTACTG.......................................................211.000.00--1.00-------------
...............................................................................................................................................................................AATCTTTTTTTTTTTTCTTTTTAG...................................................241.000.00--1.00-------------
.................................................................................................................................................................................TCTTTTTTTTTTTTCTTTTTTACC.................................................241.000.001.00---------------
...................................................................................................................................................................................TTTTTTTTTTTTCTTTTTTACTTC...............................................241.000.00-1.00--------------
...............................................................................................................................................................................AATCTTTTTTTTTTTTCTTTTTGTC..................................................251.000.001.00---------------
...............................................................................................................................................................................AATCTTTTTTTTTTTTCTTTACG....................................................231.000.00----1.00-----------
..................................................................................................................................................................................CTTTTTTTTTTTTCTTTTTTAATT................................................241.000.00-1.00--------------
.................................................................................................................................................................................TCTTTTTTTTTTTTCTTTTTTAAATT...............................................261.000.001.00---------------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTTGAC..................................................241.000.001.00---------------
...............................................................................................................................................................................AATCTTTTTTTTTTTTCTTTTTTAGAA................................................271.000.00------1.00---------
...............................................................................................................................................................................AATCTTTTTTTTTTTTCTCTCG.....................................................221.000.00----1.00-----------
..............................................................................................................................................................................TAATCTTTTTTTTTTTTCTTAG......................................................221.000.00----1.00-----------
.................................................................................................................................................................................TCTTTTTTTTTTTTCTTTTTTATATG...............................................261.000.00-----1.00----------
................................................................................................................................................................................ATCTTTTTTTTTTTTCTTTTTTGTGG................................................261.000.00-1.00--------------
..................................................................................................................................................................................CTTTTTTTTTTTTCTTTTTTAACCG...............................................251.000.00--1.00-------------
..............................................................................................................................................................................TAATCTTTTTTTTTTTTCTTTATG....................................................241.000.00---1.00------------
..........................CAGTGCAGAAGTTTC.................................................................................................................................................................................................................1560.170.17---------------0.17

Antisense strand
ATAATCTTAAAATATACCCTGAAATACAGTGCAGAAGTTTCCTAAGAACTTGGTAGCTGTACACGCTATAGTTAATAGATTTTCTCTGAGATCTATTGAAGTATGGAGAAGACCTCAAGGTTATTACTAATCTTATAATTTACTTCACATTGTAATTTTAGATCTATAGCTTGGTAATCTTTTTTTTTTTTCTTTTTTAGATACTAGCTCAGTCATGTACTGAAATCCTAGAATTGCAGCCCTCAAGTGT
...........................................................................................((((..((((...((((((((.....(((((((..((((..(((((((.........)))))))..))))....))))))).....))))))))......))))..)))).................................................
...........................................................................................92................................................................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784SRR040028(GSM532913)
G026N. (cervix)
SRR189782SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
....................................................GTAGCTGTACACGCTATA.................................................................................................................................................................................... 182.000.00-------2.00--------
....................................................GTAGCTGTACACGCTAAA.................................................................................................................................................................................... 181.000.00-------1.00--------
.................................................................................................................................................................................TCTTTTTTTTTTTTCTTTTTTAAGA................................................ 251.000.00--------------1.00-
.................................................................................................................................................................................................................CAGTCATGTACTGAATA........................ 171.000.00--------1.00-------