ID: uc003hku.2_intron_4_0_chr4_78808446_f.3p
GENE: MRPL1(5)
chr4:78815093-78815342+


(1)
B-CELL
(2)
BREAST
(7)
CELL-LINE
(2)
CERVIX
(1)
HEART
(2)
LIVER
(1)
OTHER
(3)
SKIN
(1)
TESTES

Sense strand
GCTGTTTTTAAAGGAAAATGTTTTACTTCTGATGGTTTTTATAATTGACAGGTGTATTTGTATGATCTTTGTGTTTGAAGAAAAGAATTGTGCTTAATGTCTGTTTTCTGAATTATAAAGGAAATGACTACATTGTACTTTTTCAGAACGATAAAGCTTTTCATCTCATCTGAGGTCACCTTTTTTTTTTTAATTTTCAGATTTGGGATGATGAAATTGTTGCAGACTTTTACGTAGCTGTTCCAGAAAT
...........................................................................................((((..((((.((..((((((....((((..((((....))))...)))))))))))))))))))).....(((((....)))))..........................................................................
.......................................................................................88..............................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191398(GSM715508)
35genomic small RNA (size selected RNA from t. (breast)
SRR040028(GSM532913)
G026N. (cervix)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR040035(GSM532920)
G001T. (cervix)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
..................................................................................................................................................................................CCTTTTTTTTTTTAATTTAAG...................................................2144.000.0013.0013.008.0010.00----------------
..................................................................................................................................................................................CCTTTTTTTTTTTAATTTACTG..................................................224.000.002.00-2.00-----------------
...............................................................................................................................................................................TCACCTTTTTTTTTTTGGG........................................................193.000.00----2.00------1.00--------
..................................................................................................................................................................................CCTTTTTTTTTTTAATTTACTT..................................................223.000.00-1.002.00-----------------
..................................................................................................................................................................................CCTTTTTTTTTTTAATTTTTTAG.................................................232.000.002.00-------------------
..................................................................................................................................................................................CCTTTTTTTTTTTAATTTATTG..................................................222.000.00--2.00-----------------
...................................................................................................................................................................................CTTTTTTTTTTTAATTTTCAG..................................................2131.671.670.330.670.330.33----------------
................................................................................................................................................................................CACCTTTTTTTTTTTAATTA......................................................201.000.001.00-------------------
..................................................................................................................................................................................CCTTTTTTTTTTTAATTTTCTTTG................................................241.000.00----1.00---------------
.............GAAAATGTTTTACTTCTGGGT........................................................................................................................................................................................................................211.000.00-----------------1.00--
..........................................................................................................................................................................................................TTGGGATGATGAAATTGTTGCAGAC.......................2511.001.00----------------1.00---
.......................................................................................................................................................................................................GATTTGGGATGATGAAATTGTTGCAGACTTT....................3111.001.00-------------1.00------
..............................................................................................................................................................................GTCACCTTTTTTTTTTTAATTTCCAG..................................................261.000.00----1.00---------------
..................................................................................................................................................................................CCTTTTTTTTTTTAATTTACCG..................................................221.000.00--1.00-----------------
..................................................................................................................................................................................CCTTTTTTTTTTTAATTTTCAAT.................................................231.000.00--1.00-----------------
...............................................................................................................................................................................TCACCTTTTTTTTTTTAATTTTATTT.................................................261.000.00---1.00----------------
...................................................................................................................................................................................CTTTTTTTTTTTAATTTTCAACA................................................231.000.00-------1.00------------
......................................................................................................................................................................................................AGATTTGGGATGATGAAATTGTTGCAGA........................2811.001.00------------1.00-------
..................................................................................................................................................................................CCTTTTTTTTTTTAATTTTCTT..................................................221.000.001.00-------------------
...............................................................................................................................................................................TCACCTTTTTTTTTTTAGCTG......................................................211.000.00----1.00---------------
..................................................................................................................................................................................CCTTTTTTTTTTTAATTTATG...................................................211.000.00-1.00------------------
..................................................................................................................................................................................................................ATGAAATTGTTGCAGAC.......................1711.001.00----------1.00---------
..................................................................................................................................................................................................................ATGAAATTGTTGCAGACTT.....................1911.001.00------1.00-------------
............................................................................................CTTAATGTCTGTTTTTGTC...........................................................................................................................................191.000.00---------1.00----------
................................................................................................................................................................................CACCTTTTTTTTTTTAATCCAG....................................................221.000.00-1.00------------------
..............................................................................................................................................................................GTCACCTTTTTTTTTTTACC........................................................201.000.00----1.00---------------
............................................................................................................................................................................................................GGGATGATGAAATTGTTGCA..........................2011.001.00------1.00-------------
..................................................................................................................................................................................................................ATGAAATTGTTGCAGACTTTTACGTAGCT...........2911.001.00--------------1.00-----
...................................................................................................................................................................................CTTTTTTTTTTTAATTTTCCGG.................................................221.000.001.00-------------------
...................................................................................................................................................................................CTTTTTTTTTTTAATTTTCCCAG................................................231.000.00-1.00------------------
......................................................................................................................................................ATAAAGCTTTTCATCT....................................................................................1660.170.17-------------------0.17

Antisense strand
GCTGTTTTTAAAGGAAAATGTTTTACTTCTGATGGTTTTTATAATTGACAGGTGTATTTGTATGATCTTTGTGTTTGAAGAAAAGAATTGTGCTTAATGTCTGTTTTCTGAATTATAAAGGAAATGACTACATTGTACTTTTTCAGAACGATAAAGCTTTTCATCTCATCTGAGGTCACCTTTTTTTTTTTAATTTTCAGATTTGGGATGATGAAATTGTTGCAGACTTTTACGTAGCTGTTCCAGAAAT
...........................................................................................((((..((((.((..((((((....((((..((((....))))...)))))))))))))))))))).....(((((....)))))..........................................................................
.......................................................................................88..............................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191398(GSM715508)
35genomic small RNA (size selected RNA from t. (breast)
SRR040028(GSM532913)
G026N. (cervix)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR040035(GSM532920)
G001T. (cervix)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
.................................................................................................................................................................CATCTCATCTGAGGTCGGGT..................................................................... 201.000.00---------------1.00----
.........................................................................TTTGAAGAAAAGAATTAG............................................................................................................................................................... 181.000.00-1.00------------------
...............................................................................................................................................................................................................ATGATGAAATTGTTGAAT......................... 181.000.00-------1.00------------
................................................................................................................................TACATTGTACTTTTTCACAG...................................................................................................... 201.000.00-----1.00--------------
...................................................................................................................................................................TCTCATCTGAGGTCACATTG................................................................... 201.000.00------------------1.00-
.................................................................................................................................................................CATCTCATCTGAGGTCACGGGC................................................................... 221.000.00--------1.00-----------
.................................................................................................................................ACATTGTACTTTTTCATTAG..................................................................................................... 201.000.00-----1.00--------------
................................................................................................................................TACATTGTACTTTTTCACTG...................................................................................................... 201.000.00-----1.00--------------
................................................................................................................................TACATTGTACTTTTTCACAC...................................................................................................... 201.000.00-----1.00--------------
.................................................................................................................................ACATTGTACTTTTTCATTAC..................................................................................................... 201.000.00-----1.00--------------