ID: uc003hju.1_intron_8_0_chr4_77100859_r.5p
GENE: (3)
chr4:77101907-77102156-


(1)
AGO2.ip
(3)
BRAIN
(2)
BREAST
(7)
CELL-LINE
(2)
HEART
(4)
LIVER
(1)
OTHER
(1)
SKIN
(1)
UTERUS

Sense strand
TTGGAGACCCTAAAATTGACTTAATTAGAACATTAAATATTCCTGTATTGGTAAGTAGGCATTTTAATACCATTAAGTTGGATTTTGGAAGAAAGGAAAAAGCTAAGTTAATGCTCTTTATGATTTTACATTTAGGAGCCATTAAGTTATGTTGAAATATACATATATAAAAAGAAAAATACTTCTTTTCTTTTCTTTAAAGTACATCTTGGACTTTTTTCTAAGATGTATCAAATAAGGTCTTTTCAAA
.......................................................................................((((((((((...((((((.(((((((((((.(((......)))..)))))).))))).))).))).................((((((......))))))))))))))))....................................................
............................................................................77.........................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR191427(GSM715537)
153genomic small RNA (size selected RNA from . (breast)
SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189786GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
....................................................................................................................................................................................ACTTCTTTTCTTTTCTTATTG.................................................2129.000.0019.0010.00---------------------
....................................................................................................................................................................................ACTTCTTTTCTTTTCTTTAG..................................................204.000.001.00-2.00---1.00----------------
.....................................................................................................................................................................................CTTCTTTTCTTTTCTTCG...................................................183.000.002.001.00---------------------
..................................................................................................................................................................................ATACTTCTTTTCTTTGGTG.....................................................192.000.00---1.00-1.00-----------------
..........................................CTGTATTGGTAAGTAGGCAT............................................................................................................................................................................................2012.002.00---------2.00-------------
..................................................................................................................................................................................ATACTTCTTTTCTTTTCCTTT...................................................212.000.00--2.00--------------------
.........CTAAAATTGACTTAATTAG..............................................................................................................................................................................................................................1912.002.00--------1.00-1.00------------
.................................................................................................................................................................................AATACTTCTTTTCTTTTCTTGGTG.................................................242.000.00---2.00-------------------
.....................................................................................................................................................................................CTTCTTTTCTTTTCTTTAATG................................................211.000.00------1.00----------------
...................................................................................................................................................................................TACTTCTTTTCTTTTCCTTT...................................................201.000.00--1.00--------------------
..................................................................................................................................................................................ATACTTCTTTTCTTTTCTTTG...................................................211.000.00--1.00--------------------
.TGGAGACCCTAAAATTG........................................................................................................................................................................................................................................1711.001.00------------1.00----------
...................................................................................................................................................................................TACTTCTTTTCTTTTCTTA....................................................191.000.00------1.00----------------
.....................................................................................................................................................................................CTTCTTTTCTTTTCTTAATG.................................................201.000.00-----1.00-----------------
............................................................................GTTGGATTTTGGAAGAAAGGAAAAAGC...................................................................................................................................................2711.001.00------------------1.00----
..........TAAAATTGACTTAATTAGA.............................................................................................................................................................................................................................1911.001.00-----------------1.00-----
....................................................................................................................................................................................ACTTCTTTTCTTTTCTTAAG..................................................201.000.00--1.00--------------------
..........................................................................................................................................................................................TTTCTTTTCTTTAAAGCGGG............................................201.000.00--------------------1.00--
................................................................................................................................................................................AAATACTTCTTTTCTTTTTCTG....................................................221.000.00--1.00--------------------
.................................................................................ATTTTGGAAGAAAGGAAGAAG....................................................................................................................................................211.000.00---1.00-------------------
.TGGAGACCCTAAAATTGACTTA...................................................................................................................................................................................................................................2211.001.00-------------1.00---------
.............AATTGACTTAATTAGAACATA........................................................................................................................................................................................................................211.000.00----1.00------------------
....AGACCCTAAAATTGACTTAATTA...............................................................................................................................................................................................................................2311.001.00--------1.00--------------
.............AATTGACTTAATTAGAACATT........................................................................................................................................................................................................................2111.001.00----1.00------------------
...........................................TGTATTGGTAAGTAGGCATTT..........................................................................................................................................................................................2111.001.00-------------------1.00---
....................................................................................................................................................................................ACTTCTTTTCTTTTCTTTGAG.................................................211.000.00-----1.00-----------------
................................................................................GATTTTGGAAGAAAGGAAAAAGC...................................................................................................................................................2311.001.00----------------1.00------
.................................................................................................................................................................................................TCTTTAAAGTACATCAATG......................................191.000.00--------------1.00--------
...........AAAATTGACTTAATTAGA.............................................................................................................................................................................................................................1811.001.00----1.00------------------
...............TTGACTTAATTAGAACAT.........................................................................................................................................................................................................................1811.001.00---------------------1.00-
............................................................................GTTGGATTTTGGAAGTTCA...........................................................................................................................................................191.000.00-----------1.00-----------
...................CTTAATTAGAACATTAAAT....................................................................................................................................................................................................................1920.500.50-------0.50---------------
................TGACTTAATTAGAACATT........................................................................................................................................................................................................................1820.500.50----------------------0.50
.........CTAAAATTGACTTAATTA...............................................................................................................................................................................................................................1820.500.50----------0.50------------
...........................................................................AGTTGGATTTTGGAAG...............................................................................................................................................................1670.140.14-----------0.14-----------

Antisense strand
TTGGAGACCCTAAAATTGACTTAATTAGAACATTAAATATTCCTGTATTGGTAAGTAGGCATTTTAATACCATTAAGTTGGATTTTGGAAGAAAGGAAAAAGCTAAGTTAATGCTCTTTATGATTTTACATTTAGGAGCCATTAAGTTATGTTGAAATATACATATATAAAAAGAAAAATACTTCTTTTCTTTTCTTTAAAGTACATCTTGGACTTTTTTCTAAGATGTATCAAATAAGGTCTTTTCAAA
.......................................................................................((((((((((...((((((.(((((((((((.(((......)))..)))))).))))).))).))).................((((((......))))))))))))))))....................................................
............................................................................77.........................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR191427(GSM715537)
153genomic small RNA (size selected RNA from . (breast)
SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189786GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
..................................................................................................................................................................................ATACTTCTTTTCTTTTCTGAAT.................................................. 221.000.00-------1.00---------------
..................................................................................................................................................................................ATACTTCTTTTCTTTTCTGTAT.................................................. 221.000.00-------1.00---------------