ID: uc003hga.2_intron_10_0_chr4_72332295_f.3p
GENE: SLC4A4(11)
chr4:72338216-72338465+


(1)
BRAIN
(5)
CELL-LINE
(1)
HELA
(1)
OTHER
(1)
SKIN

Sense strand
CTTTTATTGCTATTTTAAAAATTGTATCATTAAACTAAATTCTTAAACTTAGTGCTTTCTGGCTAAAGTAGAGTTTCACATTTAGTGGCTAAAGGTGATCTTGTATTTTTGTCAATCTTTCTGTAGACATTTGGTAGTTTTATATTATTCTTTGTGTTCCAAGGAGGAGGAATCTAAACATTTTTCTTTCTTTTTTCCAGGGACAATAATTTTGACTATTTGGAGTTTCGCCTTTGGATTGGCCTGTGGT
.....................................................................................................((((...((..((((((......)))...)))..))...))))..........(((((((((((((((((((......))))))))))))).......)))))).............................................
....................................................................................................101..........................................................................................................210......................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
.........................................................................................................................................................................................CTTTCTTTTTTCCAGGGGGAG............................................2138.000.0023.0015.00--------
.................................................................................................................................................................................ACATTTTTCTTTCTTTTTTTTTG..................................................234.000.00-2.001.00--1.00----
................................................................................................................................................................................AACATTTTTCTTTCTTTTTTTTG...................................................232.000.002.00---------
..................................................................................................................................................................................CATTTTTCTTTCTTTTAAG.....................................................191.000.001.00---------
.........................................................................................................TTTTTGTCAATCTTTGATT..............................................................................................................................191.000.00-------1.00--
..................................................................................................................................................................................CATTTTTCTTTCTTTTTTCAG...................................................211.000.00-1.00--------
...................................................................................................................................................................................ATTTTTCTTTCTTTTTTCCCCCC................................................231.000.00--1.00-------
....................................................................................................................................................................................TTTTTCTTTCTTTTTTCACTG.................................................211.000.00-1.00--------
.....................................................................................................................................................................................TTTTCTTTCTTTTTTCGGTA.................................................201.000.00--1.00-------
...............................................................................................................................CATTTGGTAGTTTTACCCT........................................................................................................191.000.00--------1.00-
................................................................................................................................................................................AACATTTTTCTTTCTTTTTTCTTTG.................................................251.000.00-1.00--------
......................................................................................................................................................................................TTTCTTTCTTTTTTCGGC..................................................181.000.00--1.00-------
.........................................................................................................................................................................................CTTTCTTTTTTCCAGGGGTAG............................................211.000.00-1.00--------
...................................................................................................................................................................................ATTTTTCTTTCTTTTTTCG....................................................191.000.001.00---------
..........................................................................................................................................................................................................................TTTGGAGTTTCGCCTTTGGATTG.........2311.001.00---------1.00
................................AACTAAATTCTTAAACTTTATT....................................................................................................................................................................................................221.000.00----1.00-----
.............................................................................................................................................................................................................................GGAGTTTCGCCTTTGGATTGGCCTGTGGT2911.001.00------1.00---

Antisense strand
CTTTTATTGCTATTTTAAAAATTGTATCATTAAACTAAATTCTTAAACTTAGTGCTTTCTGGCTAAAGTAGAGTTTCACATTTAGTGGCTAAAGGTGATCTTGTATTTTTGTCAATCTTTCTGTAGACATTTGGTAGTTTTATATTATTCTTTGTGTTCCAAGGAGGAGGAATCTAAACATTTTTCTTTCTTTTTTCCAGGGACAATAATTTTGACTATTTGGAGTTTCGCCTTTGGATTGGCCTGTGGT
.....................................................................................................((((...((..((((((......)))...)))..))...))))..........(((((((((((((((((((......))))))))))))).......)))))).............................................
....................................................................................................101..........................................................................................................210......................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
..........TATTTTAAAAATTGTATCCC............................................................................................................................................................................................................................ 201.000.001.00---------
.............................................................................................................................................................TCCAAGGAGGAGGAACG............................................................................ 171.000.00---1.00------