ID: uc003has.2_intron_7_0_chr4_55956246_r.3p
GENE: (22)
chr4:55956196-55956445-


(3)
BRAIN
(10)
BREAST
(2)
CELL-LINE
(1)
CERVIX
(7)
HEART
(1)
KIDNEY
(5)
LIVER
(1)
OTHER
(27)
SKIN

Sense strand
CTGTTTATGGAATAAGCAGATGTGTGTCTCAGCAAAGCTCACAGACTTTTTTCCTGAAGTGTTGATAAAAGATACTAACCCAGTCCTTGTTAATCAGTTGGCTTTCTGATGTGGGATTTTTTTTTGATGCATGAGGTCACAACAGATGTGAAAGAGATCAGCTGTGCCGAGACCTAATGCACACATGATTCTCTTTGCAGTGTATCCACAGGGACCTGGCGGCACGAAATATCCTCTTATCGGAGAAGAA
..................................................................................................................................................(((.((((((((((..(((((...........)))))..)))).)))))))))...................................................
..................................................................................................................................................147..................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577743(Rovira)
total RNA. (breast)
SRR191396(GSM715506)
29genomic small RNA (size selected RNA from t. (breast)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
TAX577744(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR040015(GSM532900)
G623T. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...................................................................................................................................................................................CACACATGATTCTCTTTGCAGT.................................................22117.0017.002.003.00---1.00-1.00--1.001.00-----1.00-1.00----1.00-1.001.00-1.00-----1.00-----1.00---------------
....................................................................................................................................................................................ACACATGATTCTCTTTGCAGTT................................................2217.004.001.00-----1.00-1.00----1.00--------1.00-------------1.00-------------1.00------
...................................................................................................................................................................................CACACATGATTCTCTTTGCAG..................................................2116.006.00-----1.00----------1.00-------------1.00---1.00--------------1.00-1.00-----
....................................................................................................................................................................................ACACATGATTCTCTTTGCAGT.................................................2114.004.00---1.00----1.00---2.00--------------------------------------------
.......................................................................................................................................................AAGAGATCAGCTGTGCCGAGA..............................................................................2113.003.001.001.00----1.00--------------------------------------------------
...................................................................................................................................................GTGAAAGAGATCAGCTGTGC...................................................................................2012.002.00-----------1.00---1.00-----------------------------------------
................................CAAAGCTCACAGACTTTTTTCCTGAAGTGTT...........................................................................................................................................................................................3112.002.00--------------2.00------------------------------------------
..................................................................................................................................................TGTGAAAGAGATCAGCTGTGCCAAA...............................................................................2512.001.00----------------1.00----------------------1.00-----------------
....................................................................................................................................................................................ACACATGATTCTCTTTGCAG..................................................2012.002.00------------------------------------------1.00---1.00----------
...................................................................................................................................................................................CACACATGATTCTCTTTGCAGA.................................................2212.006.00---1.00---------------------1.00-------------------------------
..................................................................................................................................................TGTGAAAGAGATCAGCTGTGC...................................................................................2112.002.00----------1.00-----------------------------1.00----------------
...................................................................................................................................................................................CACACATGATTCTCTTTG.....................................................1812.002.00--2.00------------------------------------------------------
......................................................................................................................................................AAAGAGATCAGCTGTGCCGAGA..............................................................................2211.001.00---1.00-----------------------------------------------------
...................................................................................................................................................GTGAAAGAGATCAGCTGTGCC..................................................................................2111.001.00-------------------------------1.00-------------------------
...................................................................................................................................................................................CACACATGATTCTCTTTGCAGTAA...............................................2411.0017.00-------------1.00-------------------------------------------
....................................................................................................................................................TGAAAGAGATCAGCTGTGC...................................................................................1911.001.00----------------------------1.00----------------------------
...............................................................................................................................................................................................................ACAGGGACCTGGCGGCACG........................1911.001.00----------------------------------------------------1.00----
................................................................................................................................................................................................................CAGGGACCTGGCGGCA..........................1611.001.00-----------------------------------------------------1.00---
...................................................................................................................................................................................CACACATGATTCTCTTTGCGG..................................................211.000.00---------------------------------1.00-----------------------
..........................................................................................................TGATGTGGGATTTTTTGG..............................................................................................................................181.000.00------------------------------------------------1.00--------
.....................................................................................................................................................................................CACATGATTCTCTTTATG...................................................181.000.00--1.00------------------------------------------------------
...................................................................................................................................................................................CACACATGATTCTCTTTGCA...................................................2011.001.00--------------------------------1.00------------------------
.....................................................................................................................................................................................CACATGATTCTCTTTATC...................................................181.000.00--1.00------------------------------------------------------
..........................................................................................TAATCAGTTGGCTTTATT..............................................................................................................................................181.000.00----1.00----------------------------------------------------
..................................................................................................................................................TGTGAAAGAGATCAGCTGTGA...................................................................................211.000.001.00--------------------------------------------------------
......................................................................................................................................................................................................................CCTGGCGGCACGAAATATCCTCT.............2311.001.00-------1.00-------------------------------------------------
....................................................................................................................................................TGAAAGAGATCAGCTGTGCCGA................................................................................2211.001.00-------------------------------------1.00-------------------
...................................................................................................................................................................................CACACATGATTCTCTTTGA....................................................1911.002.00--------------------------------------------1.00------------
.................................................................................................................................................ATGTGAAAGAGATCAGCTGTG....................................................................................2111.001.00---------------1.00-----------------------------------------
..................................................................................................................................................TGTGAAAGAGATCAGCTGTGAA..................................................................................221.000.00------------------------------------------------------1.00--
....................................................................................................................................................................................ACACATGATTCTCTTGCAG...................................................191.000.00---------1.00-----------------------------------------------
.................................................................................................................................................................................................................AGGGACCTGGCGGCACGAAAT....................2111.001.00---------1.00-----------------------------------------------
...................................................................................................................................................................................CACACATGATTCTCTTTGCAGTA................................................2311.0017.00---------------------------------------------1.00-----------
....................................................................................................................................................................................ACACATGATTCTCTTTGC....................................................1811.001.00-----------------------------------------------1.00---------
..................................................................................................................................................TGTGAAAGAGATCAGCTGTGCC..................................................................................2211.001.00--------------------------------------1.00------------------
.................................................................................................................................................ATGTGAAAGAGATCAGCTGTGCC..................................................................................2311.001.00---------------------1.00-----------------------------------
................................................................................................................................................................................................................CAGGGACCTGGCGGCACGA.......................1911.001.00-----------------------1.00---------------------------------
...................................................................................................................................................................................CACACATGATTCTCTTTGCAGC.................................................2211.006.00------------------1.00--------------------------------------
......................................................................................................................................................................................................AGTGTATCCACAGGG.....................................1530.330.33-------------------------------------------------------0.33-

Antisense strand
CTGTTTATGGAATAAGCAGATGTGTGTCTCAGCAAAGCTCACAGACTTTTTTCCTGAAGTGTTGATAAAAGATACTAACCCAGTCCTTGTTAATCAGTTGGCTTTCTGATGTGGGATTTTTTTTTGATGCATGAGGTCACAACAGATGTGAAAGAGATCAGCTGTGCCGAGACCTAATGCACACATGATTCTCTTTGCAGTGTATCCACAGGGACCTGGCGGCACGAAATATCCTCTTATCGGAGAAGAA
..................................................................................................................................................(((.((((((((((..(((((...........)))))..)))).)))))))))...................................................
..................................................................................................................................................147..................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577743(Rovira)
total RNA. (breast)
SRR191396(GSM715506)
29genomic small RNA (size selected RNA from t. (breast)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
TAX577744(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR040015(GSM532900)
G623T. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..............................................................................................................GTGGGATTTTTTTTTGTTTC........................................................................................................................ 201.000.00----1.00----------------------------------------------------
............................................................................................................................................................................................TTCTCTTTGCAGTGTGAA............................................ 181.000.00--------------------1.00------------------------------------
................................................................ATAAAAGATACTAACCCAAGGT.................................................................................................................................................................... 221.000.00-------------------------------------------1.00-------------
..............................................................................................................GTGGGATTTTTTTTTGTCT......................................................................................................................... 191.000.00----1.00----------------------------------------------------
......................................................................................................................................................................................................CCCTGTGGATACACT..................................... 1530.330.33---0.33-----------------------------------------------------
............................................................................TAACAAGGACTGGGTT.............................................................................................................................................................. 1680.120.12--------------------------------------------------------0.12