ID: uc003gyh.1_intron_40_0_chr4_48578240_r.3p
GENE: FRYL(23)
chr4:48578190-48578439-


(1)
BRAIN
(2)
BREAST
(15)
CELL-LINE
(1)
HEART
(2)
LIVER
(2)
OTHER
(5)
SKIN

Sense strand
TGAGGTGGGAGGATCACTTGAGCCTGAGAGGTGGGGAGGTTGCAGTGAGCCAAGATTATGCCAGTTGCACTCCGGCCTGGGTGACAGAGTGACACTCTGTCTCAAAAAAAAAAAAAAAGAAATTTAGCATTAGTTAAAATAAACTTTTAAAAACGTGTTGTGTTATTCATATCTGCCTATTTTTCTTTTTTTTTCCTTAGTAGCCCCATCAATGCTAAGAAAGTAAATACCACCACAAGCAGTGACTCAT
............................................................................(((((.(((((((.....)))))))........(((((((((((((..(((((..((((......)))).............((((.....))))..))).))..))))))))))))).)))))..................................................
.................................................................66....................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189786DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577579(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
................................................................................................................................................................................CTATTTTTCTTTTTTTTTCG......................................................2013.000.00--5.005.001.002.00----------------------
................................................................................................................................................................................CTATTTTTCTTTTTTTTAATG.....................................................215.000.00---5.00------------------------
.....................................................................................................................................................................................TTTCTTTTTTTTTCCTTGTC.................................................204.000.001.003.00--------------------------
.........AGGATCACTTGAGCCTGAGAATC..........................................................................................................................................................................................................................233.000.00---------3.00------------------
......................................................................TCCGGCCTGGGTGACAGA..................................................................................................................................................................1802.002.00----------2.00-----------------
..................................................................................................................................................................................ATTTTTCTTTTTTTTTCCTCG...................................................212.000.00-----2.00----------------------
.....................................................................................................................................................................................TTTCTTTTTTTTTCCTTGTCT................................................212.000.002.00---------------------------
....................................................................................................................................................................................TTTTCTTTTTTTTTCCTTATG.................................................212.000.00----2.00-----------------------
...............................................................................................................................................................................CCTATTTTTCTTTTTTTTTG.......................................................202.000.00--1.00-1.00-----------------------
................................................................................................................................................................................CTATTTTTCTTTTTTTTTCCG.....................................................211.000.00----1.00-----------------------
.....................................................................................................................................................................................TTTCTTTTTTTTTCCTTAGCC................................................211.000.00-1.00--------------------------
...................................................................................................................................................................................TTTTTCTTTTTTTTTCCTTGG..................................................211.000.001.00---------------------------
..........GGATCACTTGAGCCTGAGAGGA..........................................................................................................................................................................................................................221.000.00-------------------------1.00--
...............................................................................................................................................................................CCTATTTTTCTTTTTTTTTCAG.....................................................221.000.00----1.00-----------------------
......................................................................................................................................................................................TTCTTTTTTTTTCCTTATCA................................................201.000.00------1.00---------------------
................................................................................................................................................................................CTATTTTTCTTTTTTTTTAAG.....................................................211.000.00--1.00-------------------------
..................................................................................................................................................................................ATTTTTCTTTTTTTTTCCTTAAAAT...............................................251.000.00------1.00---------------------
................................................................................................................AAAAAAGAAATTTAGGTTA.......................................................................................................................191.000.00--------------------1.00-------
......................................GTTGCAGTGAGCCAAGATTATGAA............................................................................................................................................................................................241.000.00-----------------------1.00----
................................GGGGAGGTTGCAGTGAGGTT......................................................................................................................................................................................................201.000.00------------1.00---------------
......................................................................................................................................................................................TTCTTTTTTTTTCCTTATAG................................................201.000.00-----1.00----------------------
......................................................................TCCGGCCTGGGTGACAG...................................................................................................................................................................1701.001.00--------1.00-------------------
..............................................................................................................................................................................................................CATCAATGCTAAGAAAGTAAATACCACCACAA............3211.001.00--------------1.00-------------
.....................................................................CTCCGGCCTGGGTGACAGAG.................................................................................................................................................................2001.001.00-------------1.00--------------
...........................................................................................................................................................................TCTGCCTATTTTTCTTTTTTTTCCCT.....................................................261.000.00-1.00--------------------------
................................................................................................................................................................................CTATTTTTCTTTTTTTTTCCCAG...................................................231.000.00----1.00-----------------------
...................................................................................................................................................................................TTTTTCTTTTTTTTTCCGGG...................................................201.000.001.00---------------------------
..................................................................................................................................................................................ATTTTTCTTTTTTTTTCCAATG..................................................221.000.00-----1.00----------------------
................................GGGGAGGTTGCAGTGAGAAA......................................................................................................................................................................................................201.000.00----------------1.00-----------
..................................................................................................................................................................................ATTTTTCTTTTTTTTTCCTTCCTG................................................241.000.00-----1.00----------------------
............................................................................................................................................................................CTGCCTATTTTTCTTTTTTTTT........................................................2211.001.00------------------1.00---------
.......................................................................CCGGCCTGGGTGACAG...................................................................................................................................................................1601.001.00---------------1.00------------
....................................................................ACTCCGGCCTGGGTGACAGAGACAA.............................................................................................................................................................251.000.00----------------------1.00-----
.......................................................................................................................................................................................TCTTTTTTTTTCCTTACTG................................................191.000.00----1.00-----------------------
...................................................................CACTCCGGCCTGGGTGAC.....................................................................................................................................................................1801.001.00--------1.00-------------------
......................CCTGAGAGGTGGGGAGGTTGCAGT............................................................................................................................................................................................................2420.500.50---------------------------0.50
.................................................................................................................................................................................TATTTTTCTTTTTTTTTCCTT....................................................2160.170.17------0.17---------------------

Antisense strand
TGAGGTGGGAGGATCACTTGAGCCTGAGAGGTGGGGAGGTTGCAGTGAGCCAAGATTATGCCAGTTGCACTCCGGCCTGGGTGACAGAGTGACACTCTGTCTCAAAAAAAAAAAAAAAGAAATTTAGCATTAGTTAAAATAAACTTTTAAAAACGTGTTGTGTTATTCATATCTGCCTATTTTTCTTTTTTTTTCCTTAGTAGCCCCATCAATGCTAAGAAAGTAAATACCACCACAAGCAGTGACTCAT
............................................................................(((((.(((((((.....)))))))........(((((((((((((..(((((..((((......)))).............((((.....))))..))).))..))))))))))))).)))))..................................................
.................................................................66....................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189786DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577579(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
...............................................................GTTGCACTCCGGCCTGGGTGACAGGC................................................................................................................................................................. 264.000.002.002.00--------------------------
...............................................................GTTGCACTCCGGCCTGGGTGAGGCG.................................................................................................................................................................. 253.000.003.00---------------------------
.......................................................................................................AAAAAAAAAAAAAAAGAAATTCATG.......................................................................................................................... 253.000.00--1.001.00-1.00----------------------
..........................................................................................................AAAAAAAAAAAAGAAATTTAGCCAG....................................................................................................................... 253.000.00--2.001.00------------------------
................................GGGGAGGTTGCAGTGAGCCAAGATCTGG.............................................................................................................................................................................................. 282.000.001.001.00--------------------------
..................................................................GCACTCCGGCCTGGGTGACAGGTC................................................................................................................................................................ 242.000.002.00---------------------------
........................................................................................................AAAAAAAAAAAAAAGAAATTTAGCCAG....................................................................................................................... 272.000.00---2.00------------------------
.....................................................................................AGAGTGACACTCTGTCTCAAAATTGC........................................................................................................................................... 262.000.00-2.00--------------------------
................................GGGGAGGTTGCAGTGAGCCAAGATCGGG.............................................................................................................................................................................................. 282.000.002.00---------------------------
.......................................................................................................AAAAAAAAAAAAAAAGAAATTTAGAAG........................................................................................................................ 272.000.00---1.00--1.00---------------------
...............................................................GTTGCACTCCGGCCTGGGTGAGGC................................................................................................................................................................... 242.000.002.00---------------------------
.......................................................................................................AAAAAAAAAAAAAAAGAAATTTCATG......................................................................................................................... 262.000.00--2.00-------------------------
..........................................................................................................AAAAAAAAAAAAGAAATTTAGG.......................................................................................................................... 222.000.00--1.001.00------------------------
......................................................................TCCGGCCTGGGTGACAGAGTGAAA............................................................................................................................................................ 242.000.00-------2.00--------------------
.........................................................................................................AAAAAAAAAAAAAGAAATTTAGG.......................................................................................................................... 232.000.00---1.001.00-----------------------
...............................................................GTTGCACTCCGGCCTGGGTGACAGAGGTG.............................................................................................................................................................. 291.000.001.00---------------------------
...................................................................................................TCTCAAAAAAAAAAAAAAAGAAGGC.............................................................................................................................. 251.000.00-1.00--------------------------
......................................................................................................CAAAAAAAAAAAAAAAGAAATTCAAG.......................................................................................................................... 261.000.00-1.00--------------------------
.......................................................................................................AAAAAAAAAAAAAAAGAAATTCCAG.......................................................................................................................... 251.000.001.00---------------------------
.....................................................................CTCCGGCCTGGGTGACAGAACC............................................................................................................................................................... 221.000.001.00---------------------------
...............................................................GTTGCACTCCGGCCTGGGTGAGGCA.................................................................................................................................................................. 251.000.001.00---------------------------
...............................................................................................................AAAAAAAGAAATTTAGAG......................................................................................................................... 181.000.00----1.00-----------------------
.......................................................................................................AAAAAAAAAAAAAAAGAAATTCCGG.......................................................................................................................... 251.000.00-----1.00----------------------
..........................AGAGGTGGGGAGGTTTGCT............................................................................................................................................................................................................. 191.000.00------------------------1.00---
......................................................................................................CAAAAAAAAAAAAAAAGAAATGAGG........................................................................................................................... 251.000.00-1.00--------------------------
......................................................................................................CAAAAAAAAAAAAAAAGAAATTAC............................................................................................................................ 241.000.00-1.00--------------------------
.........................................................................................................AAAAAAAAAAAAAGAAATTTAGAAG........................................................................................................................ 251.000.00------1.00---------------------
.................................................................................................TGTCTCAAAAAAAAAAAAAAAGAAATTAG............................................................................................................................ 291.000.00--1.00-------------------------
...................................................................CACTCCGGCCTGGGTGACAGAGTGGC............................................................................................................................................................. 261.000.001.00---------------------------
................................GGGGAGGTTGCAGTGAGCCAAGATCCAG.............................................................................................................................................................................................. 281.000.00-1.00--------------------------
................................................................TTGCACTCCGGCCTGGGTGACAGGG................................................................................................................................................................. 251.000.001.00---------------------------
...............................TGGGGAGGTTGCAGTGAGTT....................................................................................................................................................................................................... 201.000.00-------------------1.00--------
......................................................................TCCGGCCTGGGTGACAGAACGG.............................................................................................................................................................. 2201.000.00-1.00--------------------------
...............................TGGGGAGGTTGCAGTGAGCCAGGG................................................................................................................................................................................................... 241.000.001.00---------------------------
................................GGGGAGGTTGCAGTGAGCCAAGATGGG............................................................................................................................................................................................... 271.000.001.00---------------------------
.........................................................................................................AAAAAAAAAAAAAGAAATTTCGG.......................................................................................................................... 231.000.001.00---------------------------
....................................................................................................CTCAAAAAAAAAAAAAAAGAAACGG............................................................................................................................. 251.000.001.00---------------------------
........................................................................................................AAAAAAAAAAAAAAGAAATTGGGC.......................................................................................................................... 241.000.00-1.00--------------------------
...............................TGGGGAGGTTGCAGTGAGCCAAGAGG................................................................................................................................................................................................. 261.000.001.00---------------------------
......................................................................................................CAAAAAAAAAAAAAAAGAAATTTGA........................................................................................................................... 251.000.001.00---------------------------
...............................................................GTTGCACTCCGGCCTGGGTGACAGAGTGGGG............................................................................................................................................................ 311.000.001.00---------------------------
...............................TGGGGAGGTTGCAGTGAGCCAAGATGGCC.............................................................................................................................................................................................. 291.000.00-1.00--------------------------
.......................................................................................................AAAAAAAAAAAAAAAGAAATTTCCG.......................................................................................................................... 251.000.00----1.00-----------------------
..................................................................GCACTCCGGCCTGGGTTACG.................................................................................................................................................................... 201.000.001.00---------------------------
...................................................................................................TCTCAAAAAAAAAAAAAAAGAAATTTG............................................................................................................................ 271.000.001.00---------------------------
........................................................................................................AAAAAAAAAAAAAAGAAATTTGGAA......................................................................................................................... 251.000.001.00---------------------------
............................AGGTGGGGAGGTTGCAGTGAGCCAAGATGGAG.............................................................................................................................................................................................. 321.000.001.00---------------------------
........................................................................CGGCCTGGGTGACAGAGTGACAC........................................................................................................................................................... 231.000.00-------1.00--------------------
.....................................................................CTCCGGCCTGGGTGACAGAGTGAAAA........................................................................................................................................................... 261.000.00-1.00--------------------------
...............................................................GTTGCACTCCGGCCTGGGTGACAGGGCG............................................................................................................................................................... 281.000.001.00---------------------------
................................................................TTGCACTCCGGCCTGGGTGACAGAGGGC.............................................................................................................................................................. 281.000.00-1.00--------------------------
................................GGGGAGGTTGCAGTGAGCCATGGG.................................................................................................................................................................................................. 241.000.001.00---------------------------
.................................GGGAGGTTGCAGTGAGCCAAGATTA................................................................................................................................................................................................ 251.000.00---------------------1.00------
.........................................................................................................AAAAAAAAAAAAAGAAATTTCATG......................................................................................................................... 241.000.00--1.00-------------------------
.......................................................................................................AAAAAAAAAAAAAAAGAAATTTAGCCAG....................................................................................................................... 281.000.00--1.00-------------------------
......................................................................................................CAAAAAAAAAAAAAAAGAAATGCCT........................................................................................................................... 251.000.00-1.00--------------------------
.......................................................................................................AAAAAAAAAAAAAAAGAAATTTAGTTAG....................................................................................................................... 281.000.00--1.00-------------------------
..................................................................GCACTCCGGCCTGGGTGAGGCC.................................................................................................................................................................. 221.000.001.00---------------------------
..................................................................GCACTCCGGCCTGGGTGAGAC................................................................................................................................................................... 211.000.00-1.00--------------------------
......................................................................................................CAAAAAAAAAAAAAAAGAAATTGCTT.......................................................................................................................... 261.000.00-1.00--------------------------
.....................................................................CTCCGGCCTGGGTGACAGAGTGGGC............................................................................................................................................................ 251.000.00-1.00--------------------------
....................................................................................................CTCAAAAAAAAAAAAAAAGAAATTTAG........................................................................................................................... 271.000.00--1.00-------------------------
..........................................................................................................AAAAAAAAAAAAGAAATTTCG........................................................................................................................... 211.000.00--1.00-------------------------
....................................................................ACTCCGGCCTGGGTGACAGAGTAA.............................................................................................................................................................. 241.000.00-----------------1.00----------
................................................................TTGCACTCCGGCCTGGACG....................................................................................................................................................................... 191.000.00-----------1.00----------------
...............................................................GTTGCACTCCGGCCTGGGTGGCG.................................................................................................................................................................... 231.000.001.00---------------------------
...................................................................................................TCTCAAAAAAAAAAAAAAAGAAAGGAG............................................................................................................................ 271.000.001.00---------------------------
.................................GGGAGGTTGCAGTGAGCCAAGTG.................................................................................................................................................................................................. 231.000.001.00---------------------------
................................GGGGAGGTTGCAGTGAGCCAAGACAG................................................................................................................................................................................................ 261.000.001.00---------------------------
............................AGGTGGGGAGGTTGCAGTGAGCCAGGG................................................................................................................................................................................................... 271.000.001.00---------------------------
......................................................................................................CAAAAAAAAAAAAAAAGAAATGGA............................................................................................................................ 241.000.001.00---------------------------
.................................GGGAGGTTGCAGTGAGCCAAGATGCA............................................................................................................................................................................................... 261.000.001.00---------------------------
.................................................................................................TGTCTCAAAAAAAAAAAAAAAGAAAGG.............................................................................................................................. 271.000.001.00---------------------------
................................GGGGAGGTTGCAGTGAGCCAAGATTCCA.............................................................................................................................................................................................. 281.000.00-1.00--------------------------
......................................................................................................CAAAAAAAAAAAAAAAGAAATGGCT........................................................................................................................... 251.000.00-1.00--------------------------
.................................................................TGCACTCCGGCCTGGGTGATTT................................................................................................................................................................... 221.000.00-------1.00--------------------
......................................................................................................CAAAAAAAAAAAAAAAGAAATTTACC.......................................................................................................................... 261.000.001.00---------------------------
................................GGGGAGGTTGCAGTGAGCCAACCGG................................................................................................................................................................................................. 251.000.001.00---------------------------
................................................................................................CTGTCTCAAAAAAAAAAAAAAAGAAATGCTC........................................................................................................................... 311.000.00-1.00--------------------------
.....................................................................................................TCAAAAAAAAAAAAAAAGAAATTG............................................................................................................................. 241.000.00-----1.00----------------------
................................GGGGAGGTTGCAGTGAGCCAAGACGGG............................................................................................................................................................................................... 271.000.00-1.00--------------------------
..................................................................TCTGTCACCCAGGCCGGAGTGC.................................................................................................................................................................. 2201.001.00--------1.00-------------------
..........................TGCAACCTCCCCACCTCT.............................................................................................................................................................................................................. 1820.500.50--------------------------0.50-
......................................................................................................CTAAATTTCTTTTTTTTTTTTTTTG........................................................................................................................... 2550.200.20-----0.20----------------------