ID: uc003gvo.2_intron_1_0_chr4_41259144_f
GENE: (2)
chr4:41259094-41259675+


(3)
AGO2.ip
(3)
B-CELL
(4)
BRAIN
(11)
BREAST
(24)
CELL-LINE
(7)
CERVIX
(2)
HELA
(1)
LIVER
(2)
OTHER
(15)
SKIN
(1)
XRN.ip

Sense strand
GGTTCGGTTTTGCCTTTTTCTTTGCATTTGCCTTTCAGATGCTGAACAAAGTGAGTGGCGTCTCGCGCCGTCTCTGGCCCCCTCCCCCGCGAGCGCCGAGGCGGGGGCGCCCACCGGTTCCGGCTGCTGGCAGGGACCAAGCCGCCCGCTGCGAGCACCGGAGACGGCCGGGCTGGGGCGTGGGCTGGGCGCCTTTCCTGGGCCCCTGCATTTAGCGGGTGACTCTACGAAACCGGTCACGGGGAGACGGAGGGGGCTGCGCCCCGTGGCGAGCGAGCGCCAGGCGGAGCTCCCGAGGGCGTGGCGCGGGCAGCACAGACTCGGCTGCACGGGCTTCGCGGGCGCCACGTGTGGGCCGCGCTTTGTGCTGTGTCATTGCGCCGGCCCGGGTGGGGGTGGCAGGGCGGGACTGGGGCTCCTCCCAGGCTCGGGTGCGGGCGCGGAGGGCGCGCGCCTCCTGGCCCCGCCCCCTGGCAGGTGCCCGCGACCCGCGTGTCCCCGTGCGCCTGGCCGCCTTGTCTCCTCTCCGCAGGTGCTGTCCCGGCTGGGGGTCGCCGGCCAGTGGCGCTTCGTGGACGTGCT
..................................................(((.(((((.......((((....))))......(((.((.(((((((((.(((((....)).))).))).))).))).)).))).....))))).))).................................................................................................................................................................................................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150..............................................................................................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR189784SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577746(Rovira)
total RNA. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR040028(GSM532913)
G026N. (cervix)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM956925PAZD5TAX577740(Rovira)
total RNA. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
GSM532877(GSM532877)
G691N. (cervix)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040011(GSM532896)
G529T. (cervix)
SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR189785SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
TAX577741(Rovira)
total RNA. (breast)
SRR040025(GSM532910)
G613T. (cervix)
SRR038861(GSM458544)
MM466. (cell line)
SRR040014(GSM532899)
G623N. (cervix)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
TAX577742(Rovira)
total RNA. (breast)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
TAX577579(Rovira)
total RNA. (breast)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577589(Rovira)
total RNA. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR029131(GSM416760)
MCF7. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
....................................................................................................................................................................CGGCCGGGCTGGGGCGCG................................................................................................................................................................................................................................................................................................................................................................................................................1836.000.0018.006.00-------1.00-1.00--------1.002.001.00------1.00-----1.00--1.00---1.00-------1.00--------1.00-------------
....................................................................................................................................................................CGGCCGGGCTGGGGCGCGAA..............................................................................................................................................................................................................................................................................................................................................................................................................209.000.004.00--1.00---------1.00------1.00--1.00------------------------1.00------------------------
....................................................................................................................................................................CGGCCGGGCTGGGGCGCGA...............................................................................................................................................................................................................................................................................................................................................................................................................197.000.001.001.00---------1.00--------------1.00------------1.00-------------1.00----------1.00--------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGCGCGCGCCTCGGG..........................................................................................................................182.000.00--------1.00------------------------1.00---------------------------------------
....................................................................................................................................................................CGGCCGGGCTGGGGCGT.................................................................................................................................................................................................................................................................................................................................................................................................................1712.002.002.00------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................GTGTCATTGCGCCGGCCC...................................................................................................................................................................................................1812.002.00-------2.00-----------------------------------------------------------------
....................................................................................................................................................................CGGCCGGGCTGGGGCGTG................................................................................................................................................................................................................................................................................................................................................................................................................1812.002.001.00---------------------------------------------------1.00--------------------
......................................................................................................................TCCGGCTGCTGGCAGGGACGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................221.000.00----1.00--------------------------------------------------------------------
.GTTCGGTTTTGCCTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.001.00-----------------------------------------------------------------1.00-------
................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGGCGCGGAGGGCCTA...................................................................................................................................191.000.00--------------------------------------------1.00----------------------------
............................................................................................................................................................................................................................................................................................................................................................................................CCGGCCCGGGTGGGGCGCG.......................................................................................................................................................................................191.000.001.00------------------------------------------------------------------------
...................................................................................................................................................................ACGGCCGGGCTGGGGCGCGA...............................................................................................................................................................................................................................................................................................................................................................................................................201.000.00---------------------------------------------1.00---------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTGCGGGCGCGGAGGG.......................................................................................................................................1811.001.00-------------------------------------------1.00-----------------------------
.....................................................................GTCTCTGGCCCCCTCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................171.000.00-------------------1.00-----------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGCGCGGAGGGCGAGGG.................................................................................................................................191.000.00--------1.00----------------------------------------------------------------
....................................................................................................................................................................CGGCCGGGCTGGGGCGCT................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00--------------------------------1.00----------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................GCGCCGGCCCGGGTGGTGC..........................................................................................................................................................................................191.000.00-------------------1.00-----------------------------------------------------
........................................................................................................................................................................CGGGCTGGGGCGTGGGGCGG..........................................................................................................................................................................................................................................................................................................................................................................................................201.000.00------------------------------------------------------1.00------------------
......................................................................................................................................................................................................................GCGGGTGACTCTACGAAACC............................................................................................................................................................................................................................................................................................................................................................2011.001.00----------1.00--------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGGCGCGGAGGGAAA....................................................................................................................................181.000.00-----------------------------------------------1.00-------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCCCGCCCCCTGGTCTG........................................................................................................191.000.00----------------------------------------1.00--------------------------------
...................................................................................................................................................................ACGGCCGGGCTGGGGCGTGGGCTGGGCGCCTC...................................................................................................................................................................................................................................................................................................................................................................................................321.000.00--------------1.00----------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................TGGGGGTGGCAGGGCGGCTC............................................................................................................................................................................201.000.00-----1.00-------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGGCGCGGAGGGCCAT...................................................................................................................................191.000.00----------1.00--------------------------------------------------------------
......................................ATGCTGAACAAAGTGAGTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00----------------------------------------------1.00--------------------------
......................................................................................................................................................................................................................GCGGGTGACTCTACGAAACCGGTC........................................................................................................................................................................................................................................................................................................................................................2411.001.00---1.00---------------------------------------------------------------------
.........................................................................................................................................................AGCACCGGAGACGGCCGGGCTGGGGCGTGG...............................................................................................................................................................................................................................................................................................................................................................................................................3011.001.00---------1.00---------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................AGGGCGGGACTGGGGCTCCTC.................................................................................................................................................................2111.001.00--1.00----------------------------------------------------------------------
.....................................................................................................................TTCCGGCTGCTGGCACCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00-------------------------------------1.00-----------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................GGGACTGGGGCTCCTTTT...............................................................................................................................................................181.000.00------------------------------------------------------------1.00------------
..............................................................................................................................................................................................................................................................GGCTGCGCCCCGTGGCGAGCGAG.................................................................................................................................................................................................................................................................................................................2311.001.00-------------------------------------------------------------1.00-----------
.......................GCATTTGCCTTTCAGTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00------1.00------------------------------------------------------------------
...................................................................................................................................................................................GTGGGCTGGGCGCCTTGGC................................................................................................................................................................................................................................................................................................................................................................................................191.000.00--1.00----------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................GCGCGGGCAGCACAGT.......................................................................................................................................................................................................................................................................161.000.00------------------------------------1.00------------------------------------
.........................................................GCGTCTCGCGCCGTCGCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00------------------------1.00------------------------------------------------
................................................................................................................................................................................................................CATTTAGCGGGTGACTCTA...................................................................................................................................................................................................................................................................................................................................................................1911.001.00------------1.00------------------------------------------------------------
...................................................................................................................................................................ACGGCCGGGCTGGGGCGTGGGCTGGGCGGCC....................................................................................................................................................................................................................................................................................................................................................................................................311.000.00-----1.00-------------------------------------------------------------------
....................................................................................................................................................................CGGCCGGGCTGGGGCGCGGC..............................................................................................................................................................................................................................................................................................................................................................................................................201.000.00-1.00-----------------------------------------------------------------------
.....................................................................................................................................................................GGCCGGGCTGGGGCGAGAA..............................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-------------1.00-----------------------------------------------------------
.....................................................................................................................................................TGCGAGCACCGGAGACGGCCGGGCTGGGG....................................................................................................................................................................................................................................................................................................................................................................................................................2911.001.00--1.00----------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................GCTCCCGAGGGCGTGGCGCG..................................................................................................................................................................................................................................................................................2011.001.001.00------------------------------------------------------------------------
.................................................................................................................................................CCGCTGCGAGCACCGGAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00------------------1.00------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................AGGGCGTGGCGCGGGCAGCACAGACCCG...................................................................................................................................................................................................................................................................281.000.00-----1.00-------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................CGAGGGCGTGGCGCGGGCAG.............................................................................................................................................................................................................................................................................2011.001.00-------------------------------------------------1.00-----------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTCCTGGCCCCGAGTC................................................................................................................191.000.00---------------1.00---------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGGGGGTCGCCGGCCAGTGGCGCTTC...........2911.001.00--1.00----------------------------------------------------------------------
................................................................................................................................................................GAGACGGCCGGGCTGGGGCGTGGGCTGGGC........................................................................................................................................................................................................................................................................................................................................................................................................3011.001.00--1.00----------------------------------------------------------------------
.............................................................................................................................................................................TGGGGCGTGGGCTGGGGCC......................................................................................................................................................................................................................................................................................................................................................................................................191.000.00--------------1.00----------------------------------------------------------
....................................................................................................................................................................CGGCCGGGCTGGGGCGCGTT..............................................................................................................................................................................................................................................................................................................................................................................................................201.000.001.00------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGCGCGGAGGGCAT....................................................................................................................................171.000.00---------------------------------------------------------1.00---------------
............................................................................................................................................................ACCGGAGACGGCCGGGCTT.......................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00---1.00---------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGCCCCGCCCCCTGGCAGGTG......................................................................................................2311.001.00--------------------------------------------------------1.00----------------
...................................................................................................................................................................................................................................................................................................CCCGAGGGCGTGGCGCGG.................................................................................................................................................................................................................................................................................1811.001.00-----------------1.00-------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGTGCGGGCGCGGAGGG.......................................................................................................................................1911.001.00------1.00------------------------------------------------------------------
............................................................................................................................................................ACCGGAGACGGCCGGGCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-----------------1.00-------------------------------------------------------
................................................................................................................................................................................................................CATTTAGCGGGTGACTCTAC..................................................................................................................................................................................................................................................................................................................................................................2011.001.00------------------1.00------------------------------------------------------
...............................................................................................................................................................GGAGACGGCCGGGCTTGTA....................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00---------------------------------------------------1.00---------------------
.....................................................................................................................................................................GGCCGGGCTGGGGCGT.................................................................................................................................................................................................................................................................................................................................................................................................................1620.500.50--------------------------------------------------------------------0.50----
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGGGCGCGGAGGGCG.....................................................................................................................................1820.500.50-------------------------------------------------------------------0.50-----
..........................................................................................................................................................................................................................................................................................................................................................................................CGCCGGCCCGGGTGG.............................................................................................................................................................................................1530.330.33-----------------------------------------------------------------------0.33-
..........................................................................................................................................................................................................................................................................................................................................................................................CGCCGGCCCGGGTGGA............................................................................................................................................................................................1630.330.330.33------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................GCCGGCCCGGGTGGG............................................................................................................................................................................................1540.250.250.25------------------------------------------------------------------------
..................................................................................................................................................................GACGGCCGGGCTGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................1570.140.14--0.14----------------------------------------------------------------------

Antisense strand
GGTTCGGTTTTGCCTTTTTCTTTGCATTTGCCTTTCAGATGCTGAACAAAGTGAGTGGCGTCTCGCGCCGTCTCTGGCCCCCTCCCCCGCGAGCGCCGAGGCGGGGGCGCCCACCGGTTCCGGCTGCTGGCAGGGACCAAGCCGCCCGCTGCGAGCACCGGAGACGGCCGGGCTGGGGCGTGGGCTGGGCGCCTTTCCTGGGCCCCTGCATTTAGCGGGTGACTCTACGAAACCGGTCACGGGGAGACGGAGGGGGCTGCGCCCCGTGGCGAGCGAGCGCCAGGCGGAGCTCCCGAGGGCGTGGCGCGGGCAGCACAGACTCGGCTGCACGGGCTTCGCGGGCGCCACGTGTGGGCCGCGCTTTGTGCTGTGTCATTGCGCCGGCCCGGGTGGGGGTGGCAGGGCGGGACTGGGGCTCCTCCCAGGCTCGGGTGCGGGCGCGGAGGGCGCGCGCCTCCTGGCCCCGCCCCCTGGCAGGTGCCCGCGACCCGCGTGTCCCCGTGCGCCTGGCCGCCTTGTCTCCTCTCCGCAGGTGCTGTCCCGGCTGGGGGTCGCCGGCCAGTGGCGCTTCGTGGACGTGCT
..................................................(((.(((((.......((((....))))......(((.((.(((((((((.(((((....)).))).))).))).))).)).))).....))))).))).................................................................................................................................................................................................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150..............................................................................................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR189784SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577746(Rovira)
total RNA. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR040028(GSM532913)
G026N. (cervix)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM956925PAZD5TAX577740(Rovira)
total RNA. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
GSM532877(GSM532877)
G691N. (cervix)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040011(GSM532896)
G529T. (cervix)
SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR189785SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
TAX577741(Rovira)
total RNA. (breast)
SRR040025(GSM532910)
G613T. (cervix)
SRR038861(GSM458544)
MM466. (cell line)
SRR040014(GSM532899)
G623N. (cervix)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
TAX577742(Rovira)
total RNA. (breast)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
TAX577579(Rovira)
total RNA. (breast)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577589(Rovira)
total RNA. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR029131(GSM416760)
MCF7. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
...........CAAATGCAAAGAAAAAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 1912.002.00----------------2.00--------------------------------------------------------
.............................................................................................CGCCGAGGCGGGGGCGACGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 202.000.00------------------------------1.001.00-----------------------------------------
........................................................................................................................................................................................................................................................GGAGGGGGCTGCGCCCCGCGAA........................................................................................................................................................................................................................................................................................................................ 221.000.00----1.00--------------------------------------------------------------------
........................................................................TCTGGCCCCCTCCCCCAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00-------------------------------------------------------1.00-----------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGCGGAGGGCGCGGGC................................................................................................................................ 181.000.00---------------1.00---------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGGGTCGCCGGCCAC.................... 171.000.00--------------------------------------------------------------1.00----------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGCGGAGGGCGCGGCCG............................................................................................................................... 191.000.00----------------------------------------------------------1.00--------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTTGTCTCCTCTTAA..................................................... 181.000.00---------------------------------------------------------------1.00---------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCAGGTGCTGTCCCGA...................................... 181.000.00---1.00---------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................GCGCGGGCAGCACAGGC...................................................................................................................................................................................................................................................................... 171.000.001.00------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGCGGAGGGCGCGGACG............................................................................................................................... 191.000.00-----------------------------------------1.00-------------------------------
........................................................................................................................................................................................................................................................GGAGGGGGCTGCGCCCCGCGG......................................................................................................................................................................................................................................................................................................................... 211.000.00----1.00--------------------------------------------------------------------
............................................................................CGCGGGGGAGGGGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1501.001.00------------1.00------------------------------------------------------------
.............................................................................................CGCCGAGGCGGGGGCGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00-------------------------1.00-----------------------------------------------
................................................................................................................ACCGGTTCCGGCTGCTGCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 201.000.00----------------------------------1.00--------------------------------------
..............................................................................................................................................................CGGAGACGGCCGGGCCGG...................................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00----------------------------1.00--------------------------------------------
............................................................................................GCGCCGAGGCGGGGGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 171.000.00---------------------------1.00---------------------------------------------
..............................................................................................GCGCCCCCGCCTCGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 1631.001.000.33---------------------0.33-----------------------------------------------0.33--
......................................................................CGGGGGAGGGGGCCAGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 1920.500.50------------------------------------------------------------------0.50------
...............................................................................................................................................................................................CAGGGGCCCAGGAAAGG...................................................................................................................................................................................................................................................................................................................................................................................... 1730.330.33---------------------------------------------------------------------0.33---
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGCCCTCCGCGCCC................................................................................................................................... 1670.140.14------------------------------------------------------------------------0.14