ID: uc003gvl.2_intron_10_0_chr4_40937157_r.3p
GENE: (7)
chr4:40937107-40937356-


(1)
AGO2.ip 		(1)
BRAIN 		(3)
BREAST 		(9)
CELL-LINE 		(1)
CERVIX 		(1)
HELA 		(3)
LIVER 		(1)
OTHER 		(2)
SKIN

Sense strand
CTCTCCTGCCCTCGTCTTCAGGTGATAATCTAGACATAGAGGGAGTGAGCCAACAAGTTGCTGTTAGAGTTAACTTGTTCCCTAACCCATCTTGTGAATATCAATGCTAACAACAGTGTCTTGTGTTTTTTTTTTTTCTTTTCTTTTCTTTTTCTTTAAATCAATGTGCTTTTTTCCTATGTGAATAATTATATGTCTAGAAACAGCCATGGAGTGATTTTGCTGTTCTGAATGGGGGAAAGATTAATAG
.................................................................................................................................................................................(((((((....))))))).......................................................
........................................................................................................................121............................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR343335RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR343334SRR029124(GSM416753)
HeLa. (hela)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189787SRR343336GSM532874(GSM532874)
G699T. (cervix)		TAX577579(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR343337TAX577743(Rovira)
total RNA. (breast)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTAGGC.....................................................................................................2415.000.0011.004.00------------------------
....................................................................................................................................................................................GTGAATAATTATATGTCTAGT.................................................2113.000.00-----13.00--------------------
.................................................................................................................................................................................................................................TTCTGAATGGGGGAACC........179.000.00--------7.00-------1.00------1.00--
.....................................................................................................................................TTTTCTTTTCTTTTCTTTTTCTTTAAATCAATG....................................................................................3316.006.00--2.00---1.003.00------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTAGGC.....................................................................................................236.000.003.003.00------------------------
...................................................................................................................................................CTTTTTCTTTAAATCAAATG...................................................................................204.000.00---------3.00--1.00-------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCGGC........................................................................................................214.000.003.00---1.00---------------------
.........................................................................................................................................CTTTTCTTTTCTTTTTCTTTAAATCAATG....................................................................................2913.003.00------3.00-------------------
................................................................................................................................TTTTTTTTTCTTTTCTTTTCTTTTTCTCTTG...........................................................................................313.000.001.00-2.00-----------------------
...........................................................................................................................TGTTTTTTTTTTTTCTTTTCTGGTG......................................................................................................253.000.001.001.00--1.00---------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCGCAG.......................................................................................................223.000.001.002.00------------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTTCTTTG..................................................................................................262.000.001.001.00------------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTTCGGCT..................................................................................................262.000.002.00-------------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCGGTT.......................................................................................................222.000.002.00-------------------------
.........................................................................................................................................CTTTTCTTTTCTTTTTCTTTAAG..........................................................................................232.000.00---1.00---1.00------------------
............................................................................................................................GTTTTTTTTTTTTCTTGGGT..........................................................................................................202.000.002.00-------------------------
......................................................................................................................TCTTGTGTTTTTTTTTTTTCTTTTTCC.........................................................................................................272.000.001.001.00------------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTAGG.....................................................................................................232.000.001.001.00------------------------
........................................................................................................................TTGTGTTTTTTTTTTTTCTTTTTCC.........................................................................................................252.000.002.00-------------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTTCTTTCGAG...............................................................................................292.000.002.00-------------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCGGC........................................................................................................202.000.002.00-------------------------
........................................................................................................................TTGTGTTTTTTTTTTTTCTTTTCCGAC.......................................................................................................272.000.002.00-------------------------
........................................................................................................................TTGTGTTTTTTTTTTTTCTTTTGG..........................................................................................................242.000.002.00-------------------------
......................................................................................................................................TTTCTTTTCTTTTCTTTTTCTAAG............................................................................................242.000.00--2.00-----------------------
...................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTCTCTTG...........................................................................................282.000.00---1.001.00---------------------
....................................................................................................................................TTTTTCTTTTCTTTTCTTTTTCCTAG............................................................................................262.000.00--1.001.00----------------------
...............................................................................................................................TTTTTTTTTTCTTTTCTTTTCTTTTTAATG.............................................................................................302.000.00--1.001.00----------------------
.........................................................................................................................................CTTTTCTTTTCTTTTTCTTCTG...........................................................................................222.000.00---2.00----------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTTTCGG....................................................................................................252.000.002.00-------------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTCAG......................................................................................................222.000.00--2.00-----------------------
................................................................................................................................TTTTTTTTTCTTTTCTTTTCCAG...................................................................................................232.000.00--2.00-----------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTAAAG.....................................................................................................232.000.00--2.00-----------------------
........................................................................................................................TTGTGTTTTTTTTTTTTCTTTTCCC.........................................................................................................252.000.001.001.00------------------------
..........................................................................................................................GTGTTTTTTTTTTTTCTTTTCAGTG.......................................................................................................252.000.00-2.00------------------------
.........................................................................................................................TGTGTTTTTTTTTTTTCTTTTCAGTG.......................................................................................................262.000.00-2.00------------------------
...................................................................................................................................................................................................................GAGTGATTTTGCTGTTCTGAATGGGG.............2612.002.00-----------2.00--------------
..........................................................................................................................................TTTTCTTTTCTTTTTCTTTAAATCAATG....................................................................................2812.002.00--1.00----1.00------------------
....................................................................................................................................TTTTTCTTTTCTTTTCTTTTTCTCATG...........................................................................................272.000.00--1.00---1.00-------------------
......................................................................................................................................TTTCTTTTCTTTTCTTTTTCTTTAAATCAATG....................................................................................3212.002.00------2.00-------------------
............................................................................................................................GTTTTTTTTTTTTCTTTTCTTTTGG.....................................................................................................252.000.002.00-------------------------
...........................................................................................................................TGTTTTTTTTTTTTCTTTTGGAG........................................................................................................231.000.001.00-------------------------
........................................................................................................................TTGTGTTTTTTTTTTTTCTTTTCATG........................................................................................................261.000.001.00-------------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTTTCTTTTATTT..............................................................................................311.000.00-1.00------------------------
...........................................................................................................................TGTTTTTTTTTTTTCTTTTCTTTTTGG....................................................................................................271.000.001.00-------------------------
............................................GTGAGCCAACAAGTTGCTGTTAGAGTTAAC................................................................................................................................................................................3011.001.00---------------------1.00----
....................................................................................................................................TTTTTCTTTTCTTTTCTTTTTCTTTGGC..........................................................................................281.000.001.00-------------------------
......................................................................................................................TCTTGTGTTTTTTTTTTTACTG..............................................................................................................221.000.00------1.00-------------------
.........................................................................................................................TGTGTTTTTTTTTTTTCTTTGAGA.........................................................................................................241.000.001.00-------------------------
..............................................................................................................................................CTTTTCTTTTTCTTTAACAAG.......................................................................................211.000.00--1.00-----------------------
.........................................................................................................................................CTTTTCTTTTCTTTTTCTTTATAA.........................................................................................241.000.00----1.00---------------------
...............................................................................................................................TTTTTTTTTTCTTTTCTTTTCTTACAG................................................................................................271.000.00---1.00----------------------
................................................................................................................................TTTTTTTTTCTTTTCTTTTCTTCCTC................................................................................................261.000.001.00-------------------------
................................................................................................................................TTTTTTTTTCTTTTCTTTTCTTATA.................................................................................................251.000.00---1.00----------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTTCCAT...................................................................................................251.000.00---1.00----------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCGCC........................................................................................................201.000.001.00-------------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTAGAC.....................................................................................................241.000.00-1.00------------------------
............................................................................................................................GTTTTTTTTTTTTCTTTTCTTTTA......................................................................................................241.000.001.00-------------------------
........................................................................................................................................................................................................................ATTTTGCTGTTCTGAATGGGGGAAAGA.......2711.001.00-------------1.00------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTAGTA......................................................................................................231.000.001.00-------------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTTTCTTTGAG................................................................................................291.000.001.00-------------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTTTCTTAG..................................................................................................271.000.00---1.00----------------------
...................................................................................................................................TTTTTTCTTTTCTTTTCTAAG..................................................................................................211.000.00-------1.00------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTATTG......................................................................................................231.000.00---1.00----------------------
..........................................................................................................................GTGTTTTTTTTTTTTCTTTTCTTTTGAC....................................................................................................281.000.001.00-------------------------
................................................................................................................................TTTTTTTTTCTTTTCTTTTCCAAG..................................................................................................241.000.00--1.00-----------------------
...........................................................................................................................TGTTTTTTTTTTTTCTTTTCTGAG.......................................................................................................241.000.00-1.00------------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTAAG.......................................................................................................221.000.00----1.00---------------------
....................................................................................................................................TTTTTCTTTTCTTTTCTTTTTCTTTAAG..........................................................................................281.000.00--1.00-----------------------
.....................................................................................................................................TTTTCTTTTCTTTTCTTTTTCGC..............................................................................................231.000.001.00-------------------------
........................................................................................................................TTGTGTTTTTTTTTTTTCTTTTGACG........................................................................................................261.000.001.00-------------------------
............................................................................................................................GTTTTTTTTTTTTCTTTTCTGCAG......................................................................................................241.000.00-1.00------------------------
.........................................................................................................................................CTTTTCTTTTCTTTTTCTTTAAAG.........................................................................................241.000.00---1.00----------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTTCTTTTTCAAG.............................................................................................311.000.00---1.00----------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTTCCTAG..................................................................................................261.000.00--1.00-----------------------
...................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTCTTGC............................................................................................271.000.001.00-------------------------
...................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTCTACT............................................................................................271.000.00---1.00----------------------
...........................................................................................................................................................................................ATTATATGTCTAGAAACAGCA..........................................211.000.00--------------1.00-----------
..................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTCTTTGC...........................................................................................291.000.001.00-------------------------
........................................................................................................................TTGTGTTTTTTTTTTTTCTTTTCTTTTTCC....................................................................................................301.000.001.00-------------------------
......................................................................................................................................TTTCTTTTCTTTTCTTTTTCTTCAGC..........................................................................................261.000.001.00-------------------------
................................................................................................................................TTTTTTTTTCTTTTCTTTTCTTTTTCTGC.............................................................................................291.000.001.00-------------------------
..................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTCTCTG............................................................................................281.000.00--1.00-----------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTTTCTTAATG................................................................................................291.000.00--1.00-----------------------
...........................................................................................................................TGTTTTTTTTTTTTCTTTTCTTTTGTAG...................................................................................................281.000.00-1.00------------------------
...........................................................................................................................................TTTCTTTTCTTTTTCTTTGTTG.........................................................................................221.000.001.00-------------------------
....................................................................................................................................................................................GTGAATAATTATATGTCTGGT.................................................211.000.00-----1.00--------------------
.........................................................................................................................TGTGTTTTTTTTTTTTCTTGTTG..........................................................................................................231.000.00-1.00------------------------
......................................................................................................................TCTTGTGTTTTTTTTTTTTCTTTTTC..........................................................................................................261.000.00-1.00------------------------
...............................................................................................................................TTTTTTTTTTCTTTTCTTTTCTTAGGC................................................................................................271.000.001.00-------------------------
....................................................................................................................................TTTTTCTTTTCTTTTCTTTTTCTTCTCT..........................................................................................281.000.00-1.00------------------------
..........................................................................................................................GTGTTTTTTTTTTTTCTTTCTCC.........................................................................................................231.000.001.00-------------------------
..................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTATG...............................................................................................251.000.00---1.00----------------------
...........................................................................................................................TGTTTTTTTTTTTTCTTTTCTTTTTTG....................................................................................................271.000.00----1.00---------------------
...............................................................................................................................TTTTTTTTTTCTTTTCTTTTCTTTAAG................................................................................................271.000.00----1.00---------------------
.................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTGCT...............................................................................................261.000.001.00-------------------------
...........................................................................................................................TGTTTTTTTTTTTTCTTTTCCGGC.......................................................................................................241.000.00-1.00------------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTTCTTTTAG................................................................................................281.000.00-1.00------------------------
.........................................................................................................................TGTGTTTTTTTTTTTTCTTGGAC..........................................................................................................231.000.00-1.00------------------------
........................................................................................................................TTGTGTTTTTTTTTTTTCTGGTA...........................................................................................................231.000.001.00-------------------------
...............................................................................................................................TTTTTTTTTTCTTTTCTTTTCTAAAG.................................................................................................261.000.00--1.00-----------------------
............................................................................................................................GTTTTTTTTTTTTCTTTTCTCGG.......................................................................................................231.000.001.00-------------------------
........................................................................................................................................TCTTTTCTTTTCTTTTTCTTCACC..........................................................................................241.000.001.00-------------------------
........................................................................................................................TTGTGTTTTTTTTTTTTCTTTGTCC.........................................................................................................251.000.001.00-------------------------
.....................................................................................................................................TTTTCTTTTCTTTTCTTTTTCTTTAAATCAATA....................................................................................331.000.00-------1.00------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTTCTTTCCC................................................................................................281.000.001.00-------------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTTTCTTTATG................................................................................................291.000.00------1.00-------------------
................................................................................................................................TTTTTTTTTCTTTTCTTTTCTTTTTGGCG.............................................................................................291.000.001.00-------------------------
........................................................................................................................TTGTGTTTTTTTTTTTTCTTTTCAGTG.......................................................................................................271.000.00-1.00------------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTTAACC...................................................................................................251.000.001.00-------------------------
................................................................................................................................TTTTTTTTTCTTTTCTTTTCTTTTTCAATA............................................................................................301.000.00------1.00-------------------
..........................................................................................................................GTGTTTTTTTTTTTTCGGT.............................................................................................................191.000.00-------------------1.00------
.........................................................................................................................................................................................................................................GGGGGAAAGATTAATTAAA191.000.00-----------------1.00--------
................................................................................................................................TTTTTTTTTCTTTTCTTTTCTTTTGCTG..............................................................................................281.000.001.00-------------------------
...................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTCTTTAAG..........................................................................................291.000.00--1.00-----------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTTTCTATTG.................................................................................................281.000.00--1.00-----------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTAAGC....................................................................................................241.000.00-1.00------------------------
.........................................................................................................................TGTGTTTTTTTTTTTTCTTTTCTTTTG......................................................................................................271.000.00-1.00------------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTAATG.....................................................................................................231.000.00---1.00----------------------
...............................................................................................................................TTTTTTTTTTCTTTTCTTTTCTTCCAG................................................................................................271.000.00---1.00----------------------
...........................................................................................................................TGTTTTTTTTTTTTCTTTTCTGA........................................................................................................231.000.00-----1.00--------------------
....................................................................................................................................TTTTTCTTTTCTTTTCTTTTTCCTTG............................................................................................261.000.00--1.00-----------------------
...................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTACCC.............................................................................................261.000.001.00-------------------------
.......................................................................................................................CTTGTGTTTTTTTTTTTTCTTTCATG.........................................................................................................261.000.001.00-------------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTTTCTTTTAG................................................................................................291.000.00---1.00----------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTTACTG....................................................................................................251.000.00-1.00------------------------
.........................................................................................................................TGTGTTTTTTTTTTTTCTTTTCCCA........................................................................................................251.000.00-1.00------------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTTCTCCAG.................................................................................................271.000.00---1.00----------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTTTCTTTTTAG...............................................................................................301.000.00-------1.00------------------
........................................................................................................................................TCTTTTCTTTTCTTTTTCTTTAATG.........................................................................................251.000.001.00-------------------------
......................................................................................................................TCTTGTGTTTTTTTTTTTTCTTTTCTTTTTC.....................................................................................................311.000.00-1.00------------------------
.........................................................................................................................TGTGTTTTTTTTTTTTCTTTTAAAG........................................................................................................251.000.00-1.00------------------------
.....................................................................................................................................TTTTCTTTTCTTTTCTTTTTCTTCCAG..........................................................................................271.000.00---1.00----------------------
.........................................................................................................................TGTGTTTTTTTTTTTTCTTTTCCCGG.......................................................................................................261.000.001.00-------------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCGGAC.......................................................................................................211.000.001.00-------------------------
...............................................................................................................................................TTTTCTTTTTCTTTAAACAG.......................................................................................201.000.00--1.00-----------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTTTCTAAG..................................................................................................271.000.00---1.00----------------------
.................................................................................................................................................................................................................TGGAGTGATTTTGCTGTT.......................1811.001.00---------------1.00----------
...............................................................................................................................TTTTTTTTTTCTTTTCTTTTCCAG...................................................................................................241.000.00---1.00----------------------
..........................................................................................................................GTGTTTTTTTTTTTTCTTTTGAC.........................................................................................................231.000.001.00-------------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTTACGT....................................................................................................251.000.00-1.00------------------------
.................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTGGC...............................................................................................261.000.001.00-------------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTTCTAGGC.................................................................................................271.000.001.00-------------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTAATG......................................................................................................231.000.00---1.00----------------------
........................................................................................................................................TCTTTTCTTTTCTTTTTCTGTGG...........................................................................................231.000.00-1.00------------------------
..............................................................................................................................................CTTTTCTTTTTCTTTAACATG.......................................................................................211.000.00-------1.00------------------
.........................................................................................................................TGTGTTTTTTTTTTTTCTTTTCCTTG.......................................................................................................261.000.001.00-------------------------
...................................................................................................................................................CTTTTTCTTTAAATCAAGTG...................................................................................201.000.00---------1.00----------------
...................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTCTTTAAAG.........................................................................................301.000.00--1.00-----------------------
....................................................................................................................................TTTTTCTTTTCTTTTCTTTTTCTAAG............................................................................................261.000.00---1.00----------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTAGC......................................................................................................231.000.001.00-------------------------
.........................................................................................................................TGTGTTTTTTTTTTTTCTTAAGG..........................................................................................................231.000.00-1.00------------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTTTCTTTAAG................................................................................................291.000.00--1.00-----------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTACG.....................................................................................................231.000.001.00-------------------------
..................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTATAG.............................................................................................271.000.00-------1.00------------------
.........................................................................................................................TGTGTTTTTTTTTTTTCTCAGG...........................................................................................................221.000.001.00-------------------------
....................................................................................................................................TTTTTCTTTTCTTTTCTTTTTCGG..............................................................................................241.000.001.00-------------------------
....................................................................................................................................TTTTTCTTTTCTTTTCTTTTTGGG..............................................................................................241.000.001.00-------------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTTCTGGG..................................................................................................261.000.00-1.00------------------------
....................................................................................................................................................................................................................AGTGATTTTGCTGTTCTGAATGGGGGAAAGA.......3111.001.00----------1.00---------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTCAG......................................................................................................231.000.00---1.00----------------------
............................................................................................................................GTTTTTTTTTTTTCTTTTCTTGGAG.....................................................................................................251.000.001.00-------------------------
......................................................................................................................................TTTCTTTTCTTTTCTTTTTCTTCAAG..........................................................................................261.000.00---1.00----------------------
...........................................................................................................................TGTTTTTTTTTTTTCTTTTCGAG........................................................................................................231.000.001.00-------------------------
...................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTGTGG.............................................................................................261.000.001.00-------------------------
...............................................................................................................................TTTTTTTTTTCTTTTCTTTTCTTATTG................................................................................................271.000.00--1.00-----------------------
....................................................................................................................................TTTTTCTTTTCTTTTCTTTTTCTCTTC...........................................................................................271.000.001.00-------------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCGGCT.......................................................................................................211.000.001.00-------------------------
...............................................................................................................................TTTTTTTTTTCTTTTCTTTAGCT....................................................................................................231.000.00-1.00------------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTTTCCTG...................................................................................................261.000.00---1.00----------------------
.........................................................................................................................TGTGTTTTTTTTTTTTCTTTTCTTTTGTT....................................................................................................291.000.00-1.00------------------------
.......................................................................................................................................................................................................GAAACAGCCATGGAGGCCA................................191.000.00--------------------1.00-----
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTTCTTTTGTAG..............................................................................................301.000.00------1.00-------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTATG......................................................................................................231.000.00----1.00---------------------
...............................................................................................................................TTTTTTTTTTCTTTTCTTTTCTTTTTCTG..............................................................................................291.000.00----1.00---------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTTTAC.....................................................................................................241.000.001.00-------------------------
............................................................................................................................GTTTTTTTTTTTTCTTTTCTTTTCTTTTTA................................................................................................301.000.001.00-------------------------
.............................................................................................................................................................................................................................GCTGTTCTGAATGGGGGA...........1811.001.00----------------------1.00---
...................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTCTCG.............................................................................................261.000.00---1.00----------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTCTAG.....................................................................................................231.000.00--1.00-----------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTTTAAG....................................................................................................251.000.00----1.00---------------------
..............................................................................................................................................CTTTTCTTTTTCTTTAACG.........................................................................................191.000.00----1.00---------------------
.........................................................................................................................TGTGTTTTTTTTTTTTCTTTTCTTTTTTTG...................................................................................................301.000.001.00-------------------------
..................................................................................................................................TTTTTTTCTTTTCTTTTCTAATG.................................................................................................231.000.00--1.00-----------------------
.........................................................................................................................................CTTTTCTTTTCTTTTTCTTTAGC..........................................................................................231.000.00----1.00---------------------
............................................................................................................................GTTTTTTTTTTTTCTTTTCTTTTGGA....................................................................................................261.000.001.00-------------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTTCCCCC..................................................................................................261.000.001.00-------------------------
...........................................................................................................................TGTTTTTTTTTTTTCTTTTGGTC........................................................................................................231.000.001.00-------------------------
...........................................................................................................................TGTTTTTTTTTTTTCTTTTCCAG........................................................................................................231.000.00-1.00------------------------
...................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTCTTTTGTT.........................................................................................301.000.001.00-------------------------
.........................................................................................................................TGTGTTTTTTTTTTTTCTTTCAGT.........................................................................................................241.000.001.00-------------------------
...........................................................................................................................TGTTTTTTTTTTTTCTTTTCTTTTTTAC...................................................................................................281.000.001.00-------------------------
...........................................................................................................................TGTTTTTTTTTTTTCTTTTCTTTTGGCT...................................................................................................281.000.001.00-------------------------
.....................................................................................................................................TTTTCTTTTCTTTTCTTTTTCTTTATTG.........................................................................................281.000.00--1.00-----------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTTTAAC....................................................................................................251.000.001.00-------------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTCAGG.....................................................................................................231.000.001.00-------------------------
.........................................................................................................................................CTTTTCTTTTCTTTTTCTTTAAATCAAAG....................................................................................291.000.00--1.00-----------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCGAGG.......................................................................................................221.000.001.00-------------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTTATC....................................................................................................241.000.00-1.00------------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTTAAGT...................................................................................................251.000.00-1.00------------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTTACTC...................................................................................................251.000.00-1.00------------------------
.................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTCTTTTG...........................................................................................301.000.00-1.00------------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTTTCTTATG.................................................................................................281.000.00----1.00---------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCGGTT.......................................................................................................211.000.001.00-------------------------
.................................................................................................................................TTTTTTTTCTTTTCTTTTCTTTTTACC..............................................................................................271.000.001.00-------------------------
.....................................................................................................................................TTTTCTTTTCTTTTCTTTTTCTTCAAG..........................................................................................271.000.00----1.00---------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTACAG....................................................................................................241.000.001.00-------------------------
.......................................................................................................................................................................................................GAAACAGCCATGGAGGC..................................171.000.00------------------------1.00-
............................................................................................................................GTTTTTTTTTTTTCTTGCAG..........................................................................................................201.000.001.00-------------------------
.................................................................................................................................TTTTTTTTCTTTTCTTTTCTTCCCC................................................................................................251.000.00-1.00------------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTTCTGC...................................................................................................251.000.001.00-------------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTTAC.....................................................................................................231.000.001.00-------------------------
..........................................................................................................................................TTTTCTTTTCTTTTTCTTTATTTG........................................................................................241.000.00------1.00-------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTTCTTTTTCTG..............................................................................................301.000.00--1.00-----------------------
...................................................................................................................................TTTTTTCTTTTCTTTTCTTTTAACT..............................................................................................251.000.00------1.00-------------------
.....................................................................................................................................TTTTCTTTTCTTTTCTTTTTCTTTATG..........................................................................................271.000.00--1.00-----------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTCTA......................................................................................................221.000.00----1.00---------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCGGCC.......................................................................................................211.000.00-1.00------------------------
.................................................................................................................................TTTTTTTTCTTTTCTTTTCTTCGAG................................................................................................251.000.001.00-------------------------
...................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTCTTCTTG..........................................................................................291.000.00--1.00-----------------------
.........................................................................................................................TGTGTTTTTTTTTTTTCTTTTGTTG........................................................................................................251.000.00-1.00------------------------
.........................................................................................................................TGTGTTTTTTTTTTTTCTTACCT..........................................................................................................231.000.00---1.00----------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTTCTTTTGGT...............................................................................................291.000.001.00-------------------------
.................................................................................................................................TTTTTTTTCTTTTCTTTTCTTCGA.................................................................................................241.000.00----1.00---------------------
..................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTCTTTCAG..........................................................................................301.000.00--1.00-----------------------
..................................................................................................................................TTTTTTTCTTTTCTTTTCTTTTTCTTTTTG..........................................................................................301.000.00--1.00-----------------------
...............................................................................................................................TTTTTTTTTTCTTTTCTTTTCTTCAAG................................................................................................271.000.00---1.00----------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTTTTCTTCCCC................................................................................................281.000.001.00-------------------------
.....................................................................................................................................TTTTCTTTTCTTTTCTTTTTCTGC.............................................................................................241.000.001.00-------------------------
...................................................................................................................................TTTTTTCTTTTCTTTTCTTTTTCTTTTCAG.........................................................................................301.000.00--1.00-----------------------
...............................................................................................................................TTTTTTTTTTCTTTTCTTTTCGAAG..................................................................................................251.000.00----1.00---------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCGAGG.......................................................................................................211.000.001.00-------------------------
.............................................................................................................................TTTTTTTTTTTTCTTTTCTTTTCTTTACAT...............................................................................................301.000.00----1.00---------------------
..............................................................................................................................TTTTTTTTTTTCTTTTCTACAG......................................................................................................221.000.00---1.00----------------------
....................................................................................................................................................................................................................AGTGATTTTGCTGTTCTGAATG................2211.001.00----------1.00---------------
.........................................................................................................................TGTGTTTTTTTTTTTTCTTTTCT..........................................................................................................2330.670.67-0.67------------------------
...........................................................................................................................TGTTTTTTTTTTTTCTTTTCTTTTCTT....................................................................................................2730.330.330.33-------------------------
....................................................................................................................................................................................................................................TGAATGGGGGAAAGAT......1640.250.25-------------------------0.25
............................................................................................................................GTTTTTTTTTTTTCTTTTCTTTTCTTTT..................................................................................................2880.250.250.12---0.12---------------------
.......................................................................................................................CTTGTGTTTTTTTTTTTTC................................................................................................................1990.110.11----0.11---------------------

Antisense strand
CTCTCCTGCCCTCGTCTTCAGGTGATAATCTAGACATAGAGGGAGTGAGCCAACAAGTTGCTGTTAGAGTTAACTTGTTCCCTAACCCATCTTGTGAATATCAATGCTAACAACAGTGTCTTGTGTTTTTTTTTTTTCTTTTCTTTTCTTTTTCTTTAAATCAATGTGCTTTTTTCCTATGTGAATAATTATATGTCTAGAAACAGCCATGGAGTGATTTTGCTGTTCTGAATGGGGGAAAGATTAATAG
.................................................................................................................................................................................(((((((....))))))).......................................................
........................................................................................................................121............................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR343335RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR343334SRR029124(GSM416753)
HeLa. (hela)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189787SRR343336GSM532874(GSM532874)
G699T. (cervix)		TAX577579(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR343337TAX577743(Rovira)
total RNA. (breast)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...........................................................................................................................TGTTTTTTTTTTTTCTTTTTGT......................................................................................................... 221.000.00------------------1.00-------
....................................................................................................................................................................................................................................TGAATGGGGGAAAGATTATCT. 211.000.00----1.00---------------------
....................................................................................................................................................................................................................................TGAATGGGGGAAAGATTAACT. 211.000.00----1.00---------------------