uc003gqd.3_intron_6_0_chr4_20852287

CTCTTGCCCTGCTCAGCTGCCAAAACGTCGTCTCCTGCTATTCAAAGCAAGTTTGTTTTTTTGTTTTTTTTTTTCCTCCGAAACTCTTGTTTCGTTTCTTTAGGCCTGCATGCATTGCCGTTCTCTACAAAGAATCAGTATATTCTACAAAAGCAATCTATTGATGTACTCATGTTTACCTAAATACCCAGGAGAACATTTGGGCAATTAGGAGTCATTTTCCATTTTGCAGACTGACAGCACAGTCTTA ..............................................................................((((((....))))))............................................................................................................................................................ ..................................................51....................................................105...............................................................................................................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	GSM532930(GSM532930) G702T. (cervix)	SRR189784	SRR207117(GSM721079) Whole cell RNA. (cell line)	SRR040009(GSM532894) G727T. (cervix)	SRR189782	SRR094132(GSM651908) small RNA(18-35nt)small RNA deep sequencing o. (uterus)	SRR189786	SRR040020(GSM532905) G699N_2. (cervix)	GSM450599(GSM450599) miRNA sequencing raw reads from post-mortem s. (brain)	SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line)
.....................................................TGTTTTTTTGTTTTTTTTTTTCTGG............................................................................................................................................................................	25		23.00	0.00	13.00	10.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCGG.............................................................................................................................................................................	24		18.00	0.00	12.00	5.00	-	-	-	-	-	-	-	-	1.00	-	-	-	-
.......................................................TTTTTTTGTTTTTTTTTTTCCTCTGCC........................................................................................................................................................................	27		10.00	0.00	8.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................TTTTGTTTTTTTTTTTCCTCTGCC........................................................................................................................................................................	24		7.00	0.00	5.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCTGGT...........................................................................................................................................................................	26		7.00	0.00	6.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCGGTA...........................................................................................................................................................................	26		6.00	0.00	5.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCTTGG...........................................................................................................................................................................	26		6.00	0.00	3.00	3.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................TTTTTTTGTTTTTTTTTTTCGGTA...........................................................................................................................................................................	24		5.00	0.00	4.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................TTTGTTTTTTTGTTTTTTTTTTTCAAGG...........................................................................................................................................................................	28		4.00	0.00	4.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................TTGTTTTTTTGTTTTTTTTTTTCCTCTGCC........................................................................................................................................................................	30		4.00	0.00	2.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................TTTGTTTTTTTGTTTTTTTTTTTCCTTTG..........................................................................................................................................................................	29	3	4.00	0.67	2.33	-	1.00	-	-	-	-	-	-	-	-	-	-	0.33	0.33
...................................................TTTGTTTTTTTGTTTTTTTTTTTCTCC............................................................................................................................................................................	27		3.00	0.00	3.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................TTGTTTTTTTGTTTTTTTTTTTCCTTTG..........................................................................................................................................................................	28		3.00	0.00	-	-	3.00	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................TTTTTTTGTTTTTTTTTTTCCTCTG..........................................................................................................................................................................	25		3.00	0.00	1.00	1.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-
....................................................TTGTTTTTTTGTTTTTTTTTTTCTCC............................................................................................................................................................................	26		3.00	0.00	1.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................TTTTTTTGTTTTTTTTTTTCCTGCC..........................................................................................................................................................................	25		3.00	0.00	3.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
......................................................GTTTTTTTGTTTTTTTTTTTCAAC............................................................................................................................................................................	24		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................AGTTTGTTTTTTTGTTTTTTTTTC.................................................................................................................................................................................	24		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................TTTTTTTGTTTTTTTTTTTCCTCCTTTG.......................................................................................................................................................................	28		2.00	0.00	1.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
....................................................TTGTTTTTTTGTTTTTTTTTTTCTTCC...........................................................................................................................................................................	27		2.00	0.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCAAGG...........................................................................................................................................................................	26		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCTTCC...........................................................................................................................................................................	26		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCCGG............................................................................................................................................................................	25		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................TTGTTTTTTTGTTTTTTTTTTTCTCCC...........................................................................................................................................................................	27		2.00	0.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCCTCTGCC........................................................................................................................................................................	29		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................TTTTTTTGTTTTTTTTTTTCCCGGG..........................................................................................................................................................................	25		2.00	0.00	-	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................TTTTTTTGTTTTTTTTTTTCCCTTG..........................................................................................................................................................................	25		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.........................................................TTTTTGTTTTTTTTTTTCCTCTGC.........................................................................................................................................................................	24		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCGGGA...........................................................................................................................................................................	26		2.00	0.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCCTCTGC.........................................................................................................................................................................	28		2.00	0.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................TTTGTTTTTTTGTTTTTTTTTTTCC..............................................................................................................................................................................	25	6	1.83	1.83	1.17	0.67	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................GTTTGTTTTTTTGTTTTTTTTTTTCTTTG...........................................................................................................................................................................	29		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCGGC............................................................................................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCGGTT...........................................................................................................................................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................TGTTTTTTTTTTTCCTCCAGTT.......................................................................................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................TTTTTTTGTTTTTTTTTTTCCTCCCC.........................................................................................................................................................................	26		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
....................................................TTGTTTTTTTGTTTTTTTTTTTCCTTCG..........................................................................................................................................................................	28		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.................................................AGTTTGTTTTTTTGTTTTTTTTTAGGC..............................................................................................................................................................................	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................AGTTTGTTTTTTTGTTTTTTTTTTTTTGC............................................................................................................................................................................	29		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................TTTTTTTGTTTTTTTTTTTCAATG...........................................................................................................................................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................................TCTTGTTTCGTTTCTTTCTT..................................................................................................................................................	20		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
..................................................GTTTGTTTTTTTGTTTTTTTTTTTCATT............................................................................................................................................................................	28		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................TTTTTTTGTTTTTTTTTTTCGGGA...........................................................................................................................................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................TTTGTTTTTTTGTTTTTTTTTAGGG..............................................................................................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCCCCA...........................................................................................................................................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................TTTGTTTTTTTGTTTTTTTTTTTCTTCC...........................................................................................................................................................................	28		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................TTTTTTTGTTTTTTTTTTTCGGAA...........................................................................................................................................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
......................................................GTTTTTTTGTTTTTTTTTTTCCCTTT..........................................................................................................................................................................	26		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................TTTTTTTGTTTTTTTTTTTCGTA............................................................................................................................................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
......................................................GTTTTTTTGTTTTTTTTTTTCCG.............................................................................................................................................................................	23		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
.......................................................TTTTTTTGTTTTTTTTTTTCCCCAG..........................................................................................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................TTTGTTTTTTTGTTTTTTTTTTTCCTCC...........................................................................................................................................................................	28	1	1.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCTCCT...........................................................................................................................................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCCGGGA..........................................................................................................................................................................	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................AGTTTGTTTTTTTGTTTAGAT....................................................................................................................................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCGAC............................................................................................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.........................................................TTTTTGTTTTTTTTTTTCCGCC...........................................................................................................................................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................TTTGTTTTTTTGTTTTTTTTTTTCTCCC...........................................................................................................................................................................	28		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
........................................................TTTTTTGTTTTTTTTTTTCCGGTT..........................................................................................................................................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................TTTTTTTGTTTTTTTTTTTCCCTGG..........................................................................................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
......................................................................................TTGTTTCGTTTCTTTATTC.................................................................................................................................................	19		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.........................................................TTTTTGTTTTTTTTTTTCCTCTGCC........................................................................................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCCTCGC..........................................................................................................................................................................	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.........................................................TTTTTGTTTTTTTTTTTCCGCG...........................................................................................................................................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................AGTTTGTTTTTTTGTTTAGA.....................................................................................................................................................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCCGGT...........................................................................................................................................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCGGT............................................................................................................................................................................	25		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................TTTTGTTTTTTTTTTTCCTCCGGGGG......................................................................................................................................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
......................................................GTTTTTTTGTTTTTTTTTTTCGG.............................................................................................................................................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
........................................................TTTTTTGTTTTTTTTTTTCCGGGC..........................................................................................................................................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.........................................................TTTTTGTTTTTTTTTTTCCGGCC..........................................................................................................................................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCTCAG...........................................................................................................................................................................	26		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................AGTTTGTTTTTTTGTTTTCAAC...................................................................................................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................TTTTTTTGTTTTTTTTTTTCCTCAGG.........................................................................................................................................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCAGGT...........................................................................................................................................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................TTTTTTTGTTTTTTTTTTTCCTCTGC.........................................................................................................................................................................	26		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
........................................................TTTTTTGTTTTTTTTTTTCCCTGG..........................................................................................................................................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................TTTTGTTTTTTTTTTTCGGTT...........................................................................................................................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.........................................................TTTTTGTTTTTTTTTTTCCTCGGCC........................................................................................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCGGCA...........................................................................................................................................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................TTTTTTTGTTTTTTTTTTTCCGGT...........................................................................................................................................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................TTTGTTTTTTTGTTTTTTTTTTTCAATG...........................................................................................................................................................................	28		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................TTTTTTTGTTTTTTTTTTTCCTGGCT.........................................................................................................................................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................TTTTTTTGTTTTTTTTTTTCCGG............................................................................................................................................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................TTTTTTTGTTTTTTTTTTTCCAAGT..........................................................................................................................................................................	25		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................TTTTTTTGTTTTTTTTTTTCCTATG..........................................................................................................................................................................	25		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCGCC............................................................................................................................................................................	25		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................TTTTTTTGTTTTTTTTTTTCCGGTA..........................................................................................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................TTTTTTTGTTTTTTTTTTTCAGGC...........................................................................................................................................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................TTGTTTTTTTGTTTTTTTTTTTCC..............................................................................................................................................................................	24	6	0.67	0.67	0.67	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................TTTGTTTTTTTGTTTTTTTTTTTCCT.............................................................................................................................................................................	26	3	0.67	0.67	0.67	-	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................TTGTTTTTTTGTTTTTTTTTTTCCCT............................................................................................................................................................................	26	6	0.50	0.67	0.33	0.17	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................TTTTGTTTTTTTTTTTCCTCC...........................................................................................................................................................................	21	4	0.50	0.50	0.50	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................................................................TTGCAGACTGACAGCACA......	18	2	0.50	0.50	-	-	-	-	-	-	-	-	-	-	-	-	0.50	-	-
...................................................TTTGTTTTTTTGTTTTTTTTTTTCCCCT...........................................................................................................................................................................	28	6	0.33	1.83	0.33	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCCTTTGC.........................................................................................................................................................................	28	7	0.29	0.14	0.14	0.14	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................TTTTGTTTTTTTTTTTCCTCCC..........................................................................................................................................................................	22	4	0.25	0.50	0.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................AGTTTGTTTTTTTGTTTTTTTTTT.................................................................................................................................................................................	24	5	0.20	0.20	-	-	-	0.20	-	-	-	-	-	-	-	-	-	-	-
...................................................TTTGTTTTTTTGTTTTTTTTTTTCCAAG...........................................................................................................................................................................	28	6	0.17	1.83	-	-	0.17	-	-	-	-	-	-	-	-	-	-	-	-
....................................................TTGTTTTTTTGTTTTTTTTTTTCCCGCC..........................................................................................................................................................................	28	6	0.17	0.67	0.17	-	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................TTGTTTTTTTGTTTTTTTTTTTCCGGG...........................................................................................................................................................................	27	6	0.17	0.67	0.17	-	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................TTGTTTTTTTGTTTTTTTTTTTCCCTTG..........................................................................................................................................................................	28	6	0.17	0.67	0.17	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................TTTGTTTTTTTGTTTTTTTTTTTCCCTTG..........................................................................................................................................................................	29	6	0.17	1.83	-	-	0.17	-	-	-	-	-	-	-	-	-	-	-	-
....................................................TTGTTTTTTTGTTTTTTTTTTTCCGCC...........................................................................................................................................................................	27	6	0.17	0.67	0.17	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCCTTTG..........................................................................................................................................................................	27	7	0.14	0.14	-	-	0.14	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCCTGGTG.........................................................................................................................................................................	28	7	0.14	0.14	-	0.14	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCCTGG...........................................................................................................................................................................	26	7	0.14	0.14	-	0.14	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCCT.............................................................................................................................................................................	24	7	0.14	0.14	-	0.14	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................TGTTTTTTTGTTTTTTTTTTTCCTTCGC.........................................................................................................................................................................	28	7	0.14	0.14	0.14	-	-	-	-	-	-	-	-	-	-	-	-	-	-

CTCTTGCCCTGCTCAGCTGCCAAAACGTCGTCTCCTGCTATTCAAAGCAAGTTTGTTTTTTTGTTTTTTTTTTTCCTCCGAAACTCTTGTTTCGTTTCTTTAGGCCTGCATGCATTGCCGTTCTCTACAAAGAATCAGTATATTCTACAAAAGCAATCTATTGATGTACTCATGTTTACCTAAATACCCAGGAGAACATTTGGGCAATTAGGAGTCATTTTCCATTTTGCAGACTGACAGCACAGTCTTA
..............................................................................((((((....))))))............................................................................................................................................................
..................................................51....................................................105...............................................................................................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

GSM532930(GSM532930)
G702T. (cervix)

SRR189784

SRR207117(GSM721079)
Whole cell RNA. (cell line)

SRR040009(GSM532894)
G727T. (cervix)

SRR189782

SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR189786

SRR040020(GSM532905)
G699N_2. (cervix)

GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

.....................................................TGTTTTTTTGTTTTTTTTTTTCTGG............................................................................................................................................................................

23.00

0.00

13.00

10.00

.....................................................TGTTTTTTTGTTTTTTTTTTTCGG.............................................................................................................................................................................

18.00

0.00

12.00

5.00

1.00

.......................................................TTTTTTTGTTTTTTTTTTTCCTCTGCC........................................................................................................................................................................

10.00

0.00

8.00

2.00

..........................................................TTTTGTTTTTTTTTTTCCTCTGCC........................................................................................................................................................................

7.00

0.00

5.00

2.00

.....................................................TGTTTTTTTGTTTTTTTTTTTCTGGT...........................................................................................................................................................................

7.00

0.00

6.00

1.00

.....................................................TGTTTTTTTGTTTTTTTTTTTCGGTA...........................................................................................................................................................................

6.00

0.00

5.00

1.00

.....................................................TGTTTTTTTGTTTTTTTTTTTCTTGG...........................................................................................................................................................................

6.00

0.00

3.00

.......................................................TTTTTTTGTTTTTTTTTTTCGGTA...........................................................................................................................................................................

5.00

0.00

4.00

1.00

...................................................TTTGTTTTTTTGTTTTTTTTTTTCAAGG...........................................................................................................................................................................

4.00

0.00

4.00

....................................................TTGTTTTTTTGTTTTTTTTTTTCCTCTGCC........................................................................................................................................................................

4.00

0.00

2.00

...................................................TTTGTTTTTTTGTTTTTTTTTTTCCTTTG..........................................................................................................................................................................

4.00

0.67

2.33

1.00

0.33

...................................................TTTGTTTTTTTGTTTTTTTTTTTCTCC............................................................................................................................................................................

3.00

0.00

3.00

....................................................TTGTTTTTTTGTTTTTTTTTTTCCTTTG..........................................................................................................................................................................

3.00

0.00

3.00

.......................................................TTTTTTTGTTTTTTTTTTTCCTCTG..........................................................................................................................................................................

3.00

0.00

1.00

....................................................TTGTTTTTTTGTTTTTTTTTTTCTCC............................................................................................................................................................................

3.00

0.00

1.00

2.00

.......................................................TTTTTTTGTTTTTTTTTTTCCTGCC..........................................................................................................................................................................

3.00

0.00

3.00

......................................................GTTTTTTTGTTTTTTTTTTTCAAC............................................................................................................................................................................

2.00

0.00

2.00

.................................................AGTTTGTTTTTTTGTTTTTTTTTC.................................................................................................................................................................................

2.00

0.00

2.00

.......................................................TTTTTTTGTTTTTTTTTTTCCTCCTTTG.......................................................................................................................................................................

2.00

0.00

1.00

....................................................TTGTTTTTTTGTTTTTTTTTTTCTTCC...........................................................................................................................................................................

2.00

0.00

1.00

.....................................................TGTTTTTTTGTTTTTTTTTTTCAAGG...........................................................................................................................................................................

2.00

0.00

2.00

.....................................................TGTTTTTTTGTTTTTTTTTTTCTTCC...........................................................................................................................................................................

2.00

0.00

2.00

.....................................................TGTTTTTTTGTTTTTTTTTTTCCGG............................................................................................................................................................................

2.00

0.00

2.00

....................................................TTGTTTTTTTGTTTTTTTTTTTCTCCC...........................................................................................................................................................................

2.00

0.00

1.00

.....................................................TGTTTTTTTGTTTTTTTTTTTCCTCTGCC........................................................................................................................................................................

2.00

0.00

2.00

.......................................................TTTTTTTGTTTTTTTTTTTCCCGGG..........................................................................................................................................................................

2.00

0.00

1.00

.......................................................TTTTTTTGTTTTTTTTTTTCCCTTG..........................................................................................................................................................................

2.00

0.00

2.00

.........................................................TTTTTGTTTTTTTTTTTCCTCTGC.........................................................................................................................................................................

2.00

0.00

2.00

.....................................................TGTTTTTTTGTTTTTTTTTTTCGGGA...........................................................................................................................................................................

2.00

0.00

1.00

.....................................................TGTTTTTTTGTTTTTTTTTTTCCTCTGC.........................................................................................................................................................................

2.00

0.00

1.00

...................................................TTTGTTTTTTTGTTTTTTTTTTTCC..............................................................................................................................................................................

1.83

1.17

0.67

..................................................GTTTGTTTTTTTGTTTTTTTTTTTCTTTG...........................................................................................................................................................................

1.00

0.00

1.00

.....................................................TGTTTTTTTGTTTTTTTTTTTCGGC............................................................................................................................................................................

1.00

0.00

1.00

.....................................................TGTTTTTTTGTTTTTTTTTTTCGGTT...........................................................................................................................................................................

1.00

0.00

1.00

.............................................................TGTTTTTTTTTTTCCTCCAGTT.......................................................................................................................................................................

1.00

0.00

1.00

.......................................................TTTTTTTGTTTTTTTTTTTCCTCCCC.........................................................................................................................................................................

1.00

0.00

1.00

....................................................TTGTTTTTTTGTTTTTTTTTTTCCTTCG..........................................................................................................................................................................

1.00

0.00

1.00

.................................................AGTTTGTTTTTTTGTTTTTTTTTAGGC..............................................................................................................................................................................

1.00

0.00

1.00

.................................................AGTTTGTTTTTTTGTTTTTTTTTTTTTGC............................................................................................................................................................................

1.00

0.00

1.00

.......................................................TTTTTTTGTTTTTTTTTTTCAATG...........................................................................................................................................................................

1.00

0.00

1.00

....................................................................................TCTTGTTTCGTTTCTTTCTT..................................................................................................................................................

1.00

0.00

1.00

..................................................GTTTGTTTTTTTGTTTTTTTTTTTCATT............................................................................................................................................................................

1.00

0.00

1.00

.......................................................TTTTTTTGTTTTTTTTTTTCGGGA...........................................................................................................................................................................

1.00

0.00

1.00

...................................................TTTGTTTTTTTGTTTTTTTTTAGGG..............................................................................................................................................................................

1.00

0.00

1.00

.....................................................TGTTTTTTTGTTTTTTTTTTTCCCCA...........................................................................................................................................................................

1.00

0.00

1.00

...................................................TTTGTTTTTTTGTTTTTTTTTTTCTTCC...........................................................................................................................................................................

1.00

0.00

1.00

.......................................................TTTTTTTGTTTTTTTTTTTCGGAA...........................................................................................................................................................................

1.00

0.00

1.00

......................................................GTTTTTTTGTTTTTTTTTTTCCCTTT..........................................................................................................................................................................

1.00

0.00

1.00

.......................................................TTTTTTTGTTTTTTTTTTTCGTA............................................................................................................................................................................

1.00

0.00

1.00

......................................................GTTTTTTTGTTTTTTTTTTTCCG.............................................................................................................................................................................

1.00

0.00

1.00

.......................................................TTTTTTTGTTTTTTTTTTTCCCCAG..........................................................................................................................................................................

1.00

0.00

1.00

...................................................TTTGTTTTTTTGTTTTTTTTTTTCCTCC...........................................................................................................................................................................

1.00

.....................................................TGTTTTTTTGTTTTTTTTTTTCTCCT...........................................................................................................................................................................

1.00

0.00

1.00

.....................................................TGTTTTTTTGTTTTTTTTTTTCCGGGA..........................................................................................................................................................................

1.00

0.00

1.00

.................................................AGTTTGTTTTTTTGTTTAGAT....................................................................................................................................................................................

1.00

0.00

1.00

.....................................................TGTTTTTTTGTTTTTTTTTTTCGAC............................................................................................................................................................................

1.00

0.00

1.00

.........................................................TTTTTGTTTTTTTTTTTCCGCC...........................................................................................................................................................................

1.00

0.00

1.00

...................................................TTTGTTTTTTTGTTTTTTTTTTTCTCCC...........................................................................................................................................................................

1.00

0.00

1.00

........................................................TTTTTTGTTTTTTTTTTTCCGGTT..........................................................................................................................................................................

1.00

0.00

1.00

.......................................................TTTTTTTGTTTTTTTTTTTCCCTGG..........................................................................................................................................................................

1.00

0.00

1.00

......................................................................................TTGTTTCGTTTCTTTATTC.................................................................................................................................................

1.00

0.00

1.00

.........................................................TTTTTGTTTTTTTTTTTCCTCTGCC........................................................................................................................................................................

1.00

0.00

1.00

.....................................................TGTTTTTTTGTTTTTTTTTTTCCTCGC..........................................................................................................................................................................

1.00

0.00

1.00

.........................................................TTTTTGTTTTTTTTTTTCCGCG...........................................................................................................................................................................

1.00

0.00

1.00

.................................................AGTTTGTTTTTTTGTTTAGA.....................................................................................................................................................................................

1.00

0.00

1.00

.....................................................TGTTTTTTTGTTTTTTTTTTTCCGGT...........................................................................................................................................................................

1.00

0.00

1.00

.....................................................TGTTTTTTTGTTTTTTTTTTTCGGT............................................................................................................................................................................

1.00

0.00

1.00

..........................................................TTTTGTTTTTTTTTTTCCTCCGGGGG......................................................................................................................................................................

1.00

0.00

1.00

......................................................GTTTTTTTGTTTTTTTTTTTCGG.............................................................................................................................................................................

1.00

0.00

1.00

........................................................TTTTTTGTTTTTTTTTTTCCGGGC..........................................................................................................................................................................

1.00

0.00

1.00

.........................................................TTTTTGTTTTTTTTTTTCCGGCC..........................................................................................................................................................................

1.00

0.00

1.00

.....................................................TGTTTTTTTGTTTTTTTTTTTCTCAG...........................................................................................................................................................................

1.00

0.00

1.00

.................................................AGTTTGTTTTTTTGTTTTCAAC...................................................................................................................................................................................

1.00

0.00

1.00

.......................................................TTTTTTTGTTTTTTTTTTTCCTCAGG.........................................................................................................................................................................

1.00

0.00

1.00

.....................................................TGTTTTTTTGTTTTTTTTTTTCAGGT...........................................................................................................................................................................

1.00

0.00

1.00

.......................................................TTTTTTTGTTTTTTTTTTTCCTCTGC.........................................................................................................................................................................

1.00

0.00

1.00

........................................................TTTTTTGTTTTTTTTTTTCCCTGG..........................................................................................................................................................................

1.00

0.00

1.00

..........................................................TTTTGTTTTTTTTTTTCGGTT...........................................................................................................................................................................

1.00

0.00

1.00

.........................................................TTTTTGTTTTTTTTTTTCCTCGGCC........................................................................................................................................................................

1.00

0.00

1.00

.....................................................TGTTTTTTTGTTTTTTTTTTTCGGCA...........................................................................................................................................................................

1.00

0.00

1.00

.......................................................TTTTTTTGTTTTTTTTTTTCCGGT...........................................................................................................................................................................

1.00

0.00

1.00

...................................................TTTGTTTTTTTGTTTTTTTTTTTCAATG...........................................................................................................................................................................

1.00

0.00

1.00

.......................................................TTTTTTTGTTTTTTTTTTTCCTGGCT.........................................................................................................................................................................

1.00

0.00

1.00

.......................................................TTTTTTTGTTTTTTTTTTTCCGG............................................................................................................................................................................

1.00

0.00

1.00

.......................................................TTTTTTTGTTTTTTTTTTTCCAAGT..........................................................................................................................................................................

1.00

0.00

1.00

.......................................................TTTTTTTGTTTTTTTTTTTCCTATG..........................................................................................................................................................................

1.00

0.00

1.00

.....................................................TGTTTTTTTGTTTTTTTTTTTCGCC............................................................................................................................................................................

1.00

0.00

1.00

.......................................................TTTTTTTGTTTTTTTTTTTCCGGTA..........................................................................................................................................................................

1.00

0.00

1.00

.......................................................TTTTTTTGTTTTTTTTTTTCAGGC...........................................................................................................................................................................

1.00

0.00

1.00

....................................................TTGTTTTTTTGTTTTTTTTTTTCC..............................................................................................................................................................................

0.67

...................................................TTTGTTTTTTTGTTTTTTTTTTTCCT.............................................................................................................................................................................

0.67

....................................................TTGTTTTTTTGTTTTTTTTTTTCCCT............................................................................................................................................................................

0.50

0.67

0.33

0.17

..........................................................TTTTGTTTTTTTTTTTCCTCC...........................................................................................................................................................................

0.50

..................................................................................................................................................................................................................................TTGCAGACTGACAGCACA......

0.50

...................................................TTTGTTTTTTTGTTTTTTTTTTTCCCCT...........................................................................................................................................................................

0.33

1.83

0.33

.....................................................TGTTTTTTTGTTTTTTTTTTTCCTTTGC.........................................................................................................................................................................

0.29

0.14

..........................................................TTTTGTTTTTTTTTTTCCTCCC..........................................................................................................................................................................

0.25

0.50

0.25

.................................................AGTTTGTTTTTTTGTTTTTTTTTT.................................................................................................................................................................................

0.20

...................................................TTTGTTTTTTTGTTTTTTTTTTTCCAAG...........................................................................................................................................................................

0.17

1.83

0.17

....................................................TTGTTTTTTTGTTTTTTTTTTTCCCGCC..........................................................................................................................................................................

0.17

0.67

0.17

....................................................TTGTTTTTTTGTTTTTTTTTTTCCGGG...........................................................................................................................................................................

0.17

0.67

0.17

....................................................TTGTTTTTTTGTTTTTTTTTTTCCCTTG..........................................................................................................................................................................

0.17

0.67

0.17

...................................................TTTGTTTTTTTGTTTTTTTTTTTCCCTTG..........................................................................................................................................................................

0.17

1.83

0.17

....................................................TTGTTTTTTTGTTTTTTTTTTTCCGCC...........................................................................................................................................................................

0.17

0.67

0.17

.....................................................TGTTTTTTTGTTTTTTTTTTTCCTTTG..........................................................................................................................................................................

0.14

.....................................................TGTTTTTTTGTTTTTTTTTTTCCTGGTG.........................................................................................................................................................................

0.14

.....................................................TGTTTTTTTGTTTTTTTTTTTCCTGG...........................................................................................................................................................................

0.14

.....................................................TGTTTTTTTGTTTTTTTTTTTCCT.............................................................................................................................................................................

0.14

.....................................................TGTTTTTTTGTTTTTTTTTTTCCTTCGC.........................................................................................................................................................................

0.14