ID: uc003gpm.3_intron_4_0_chr4_17641020_r.5p
GENE: (13)
chr4:17643479-17643728-


(2)
BRAIN
(5)
BREAST
(6)
CELL-LINE
(2)
CERVIX
(3)
HEART
(1)
LIVER
(1)
OTHER
(12)
SKIN
(1)
TESTES

Sense strand
GAGGTGGAGCAGCATCAGCAGGAGGCGCAGAAGCTCCGAGACCAGCGCAGGTGGGTGACCCGGCGCGCCCCGCCACCGCGCCACCCTCACCCCCTACCCCGCCACCCCCCCTCCCCCTACTGCGGCTGGCTGAGCCTGAGACCTGAAATGGGTCACTGCCTCGGCATCCTGCCCCACAAGACACTAGACACTGAATGCGCCAGCATTTCACAGATGTTACTCCTCTGACCCATGAAAAGTCCCAGAGCTC
....................................................((((((...((((((.........))))))....))))))..............................................................................................................................................................
..................................................51..............................................................115.....................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
TAX577744(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR189784GSM532889(GSM532889)
G576N. (cervix)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577579(Rovira)
total RNA. (breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577589(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
...........................................................CCGGCGCGCCCCGCCGGG.............................................................................................................................................................................1829.000.0019.0010.00---------------------------------
..........................................................CCCGGCGCGCCCCGCCGGGG............................................................................................................................................................................2012.000.003.004.001.00-------------1.001.00----1.00----1.00-------
.....................................................................................................CCACCCCCCCTCCCCGCGC..................................................................................................................................193.000.00--1.00--------1.00------1.00----------------
...........................................................CCGGCGCGCCCCGCCGGGG............................................................................................................................................................................193.000.001.001.00------------1.00--------------------
......................................................................................................CACCCCCCCTCCCCCTCCT.................................................................................................................................191.000.00---------------1.00-------------------
...........................................................CCGGCGCGCCCCGCCCGGA............................................................................................................................................................................191.000.00-------------------------1.00---------
..........................................................CCCGGCGCGCCCCGCCGCGG............................................................................................................................................................................201.000.001.00----------------------------------
...........................................................CCGGCGCGCCCCGCCGCGC............................................................................................................................................................................191.000.00-1.00---------------------------------
...................................................................................................CGCCACCCCCCCTCCCTTC....................................................................................................................................191.000.00-----------------------1.00-----------
...........................................................CCGGCGCGCCCCGCCGCT.............................................................................................................................................................................181.000.001.00----------------------------------
.......AGCAGCATCAGCAGGACA.................................................................................................................................................................................................................................181.000.00---------1.00-------------------------
...................................................................................................CGCCACCCCCCCTCCCCTCGG..................................................................................................................................211.000.00--------1.00--------------------------
........................................................GACCCGGCGCGCCCCGCCAT..............................................................................................................................................................................201.000.00--------------------1.00--------------
.........................................................................................CCCCCTACCCCGCCACCC...............................................................................................................................................1860.170.17--------------------------------0.17--

Antisense strand
GAGGTGGAGCAGCATCAGCAGGAGGCGCAGAAGCTCCGAGACCAGCGCAGGTGGGTGACCCGGCGCGCCCCGCCACCGCGCCACCCTCACCCCCTACCCCGCCACCCCCCCTCCCCCTACTGCGGCTGGCTGAGCCTGAGACCTGAAATGGGTCACTGCCTCGGCATCCTGCCCCACAAGACACTAGACACTGAATGCGCCAGCATTTCACAGATGTTACTCCTCTGACCCATGAAAAGTCCCAGAGCTC
....................................................((((((...((((((.........))))))....))))))..............................................................................................................................................................
..................................................51..............................................................115.....................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
TAX577744(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR189784GSM532889(GSM532889)
G576N. (cervix)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577579(Rovira)
total RNA. (breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577589(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
...........................................................CCGGCGCGCCCCGCCCGGG............................................................................................................................................................................ 197.000.00----1.00--1.001.001.00--1.00------1.00-1.00-------------
...........................................................CCGGCGCGCCCCGCCCGG............................................................................................................................................................................. 181.000.00-------------1.00---------------------
.............................GAAGCTCCGAGACCAGATA.......................................................................................................................................................................................................... 191.000.00-----1.00-----------------------------
....................................................................GGTGGCGCGGTGGCGGG..................................................................................................................................................................... 1711.001.00----1.00------------------------------
............................................................................CGCGCCACCCTCACCAAC............................................................................................................................................................ 181.000.00---1.00-------------------------------
...........................................................CCGGCGCGCCCCGCCTGGG............................................................................................................................................................................ 191.000.00--1.00--------------------------------
...........................................................................................................................................................CTGCCTCGGCATCCTGCCCCACAAC...................................................................... 251.000.00------1.00----------------------------
.........................................................................................................................................................TTGTGGGGCAGGATGCCGAGGCAGTG....................................................................... 2611.001.00------1.00----------------------------
................................................................................................................................................GAAATGGGTCACTGCCTAC....................................................................................... 191.000.00------------------------1.00----------
..........................................................................................................................................................................................................................................AAAAGTCCCAGAGCTTGCA 191.000.00----------------------------1.00------
................................................................................................CCCCGCCACCCCCCCGCGG....................................................................................................................................... 191.000.001.00----------------------------------
....................................................................................................................................................................................................AACATCTGTGAAATGCTGGCGC................................ 2211.001.00-------1.00---------------------------
............................................................................................................................GCTGGCTGAGCCTGAGCAG........................................................................................................... 191.000.00----------1.00------------------------
...............................................................................................................................................................................................AGTAACATCTGTGAAATGCTGGCGCATTCA............................. 3011.001.00--------------------------1.00--------
..........................................................................................................CCCCCTCCCCCTACTCA............................................................................................................................... 171.000.00---1.00-------------------------------
.....................................................................................................CCACCCCCCCTCCCCCAGTG................................................................................................................................. 201.000.00-----1.00-----------------------------
.....................................................................GGTGGCGCGGTGGCGG..................................................................................................................................................................... 1630.330.33-----------------------------0.33-----
........................................................GGGGCGCGCCGGGTC................................................................................................................................................................................... 1530.330.33------------------------------0.33----
.................................................................GCGCGGTGGCGGGGCG......................................................................................................................................................................... 1640.250.25-------------------------------0.25---
........................................................................................TGGCGGGGTAGGGGGT.................................................................................................................................................. 1680.120.12---------------------------------0.12-
.............................................................................GGGTGAGGGTGGCGC.............................................................................................................................................................. 1590.110.11----------------------------------0.11