uc003gpm.3_intron_11_0_chr4_17690155

AAGAAGAGAAAGCAGCCCTCAATGTGAAGCTTCAGAATTCTCTGCTTGAGGTGAGCCCTGACCAAATGCAAGCCTTGGGGTGCTGTTTCTGGTCCCTGGGAGCTTCTACCTAACTGAGAAGCCAAGAATTTTGGAAGACAGAAAAGGACACTCAGCCAGACAGGCAGGCTGTCTCGGGGGGCGTGCATTTAGCTGCAAGTAACAGAGAGCCAGATTAGAGATGCTTAAACAAAGAGGCTTTTAATGTCTC
...........................................................................................................((((..((((((((((.....(((((.....)))))...........(((.....))).)))).))))))..)).))..................................................................
...........................................................................................................108...............................................................................190..........................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR060168(GSM565978)
5-8F_nucleus. (cell line)

SRR207116(GSM721078)
Nuclear RNA. (cell line)

SRR207110(GSM721072)
Nuclear RNA. (cell line)

SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)

SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)

SRR037943(GSM510481)
293DcrTN. (cell line)

SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)

SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)

SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)

SRR189782

SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)

SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)

SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)

SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)

SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)

TAX577741(Rovira)
total RNA. (breast)

SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)

SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)

SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)

SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)

SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)

SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)

SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)

TAX577579(Rovira)
total RNA. (breast)

SRR038860(GSM458543)
MM426. (cell line)

SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)

SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)

TAX577745(Rovira)
total RNA. (breast)

DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)

SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)

SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)

SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)

SRR038861(GSM458544)
MM466. (cell line)

DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)

SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)

SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)

SRR015361(GSM380326)
Memory B cells (MM55). (B cell)

SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)

SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)

SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)

SRR040028(GSM532913)
G026N. (cervix)

SRR189783

SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)

SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)

SRR029128(GSM416757)
H520. (cell line)

SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR038854(GSM458537)
MM653. (cell line)

SRR038859(GSM458542)
MM386. (cell line)

SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR029126(GSM416755)
143B. (cell line)

SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)

SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)

SRR038857(GSM458540)
D20. (cell line)

SRR029131(GSM416760)
MCF7. (cell line)

SRR040024(GSM532909)
G613N. (cervix)

SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)

SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)

SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)

SRR189784

SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)

SRR040041(GSM532926)
G612T. (cervix)

SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)

SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)

SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)

SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)

SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)

GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)

SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)

SRR029129(GSM416758)
SW480. (cell line)

SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)

SRR040016(GSM532901)
G645N. (cervix)

SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)

SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR033724(GSM497069)
L428 cell line (L428). (B cell)

SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)

SRR040036(GSM532921)
G243N. (cervix)

SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)

SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)

SRR038855(GSM458538)
D10. (cell line)

SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)

TAX577739(Rovira)
total RNA. (breast)

SRR191580(GSM715690)
103genomic small RNA (size selected RNA from . (breast)

SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)

SRR040022(GSM532907)
G575N. (cervix)

SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)

SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)

SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)

SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)

SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)

SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)

SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)

TAX577744(Rovira)
total RNA. (breast)

SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)

SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)

SRR038853(GSM458536)
MELB. (cell line)

SRR038862(GSM458545)
MM472. (cell line)

SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)

SRR191538(GSM715648)
49genomic small RNA (size selected RNA from t. (breast)

SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)

SRR033731(GSM497076)
h929 Cell line (h929). (B cell)

SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)

SRR553574(SRX182780)
source: Heart. (Heart)

SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)

TAX577743(Rovira)
total RNA. (breast)

SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)

SRR040015(GSM532900)
G623T. (cervix)

DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

................................................................................................................ACTGAGAAGCCAAGACTG........................................................................................................................

135.00

0.00

12.00

8.00

2.00

12.00

3.00

2.00

4.00

2.00

1.00

2.00

3.00

1.00

4.00

2.00

1.00

4.00

1.00

2.00

3.00

2.00

1.00

3.00

1.00

3.00

1.00

2.00

1.00

2.00

1.00

2.00

1.00

................................................................................................................ACTGAGAAGCCAAGACTGA.......................................................................................................................

94.00

0.00

8.00

4.00

6.00

7.00

3.00

7.00

2.00

4.00

3.00

2.00

4.00

1.00

2.00

1.00

2.00

1.00

2.00

1.00

2.00

1.00

2.00

3.00

1.00

...............................................................................................................AACTGAGAAGCCAAGACTGA.......................................................................................................................

66.00

0.00

3.00

4.00

2.00

3.00

2.00

1.00

2.00

3.00

4.00

2.00

1.00

2.00

1.00

2.00

1.00

4.00

1.00

3.00

1.00

2.00

1.00

...............................................................................................................AACTGAGAAGCCAAGACTG........................................................................................................................

27.00

0.00

6.00

3.00

1.00

...............................................................................................................AACTGAGAAGCCAAGACT.........................................................................................................................

6.00

0.00

3.00

1.00

2.00

................................................................................................................ACTGAGAAGCCAAGACCG........................................................................................................................

1.00

0.00

1.00

................................................................................................................ACTGAGAAGCCAAGACTA........................................................................................................................

1.00

0.00

1.00

................................................................................................................ACTGAGAAGCCAAGACGG........................................................................................................................

1.00

0.00

1.00

................................................................................................................................................................................................................................TTAAACAAAGAGGCTCG.........

1.00

0.00

1.00

.........AAGCAGCCCTCAATGTCTCG.............................................................................................................................................................................................................................

1.00

0.00

1.00

...............................................................................................................AACTGAGAAGCCAAGACTAA.......................................................................................................................

1.00

0.00

1.00

................................................................................................................ACTGAGAAGCCAAGAATGAGC.....................................................................................................................

1.00

0.00

1.00

.........AAGCAGCCCTCAATGTTTGG.............................................................................................................................................................................................................................

1.00

0.00

1.00

.........AAGCAGCCCTCAATGTCCCG.............................................................................................................................................................................................................................

1.00

0.00

1.00

.........AAGCAGCCCTCAATGTCG...............................................................................................................................................................................................................................

1.00

0.00

1.00

.......................................................................................................................................................................GCTGTCTCGGGGGGCCTCG................................................................

1.00

0.00

1.00

.........AAGCAGCCCTCAATGTTC...............................................................................................................................................................................................................................

1.00

0.00

1.00

.........AAGCAGCCCTCAATGTTCTG.............................................................................................................................................................................................................................

1.00

0.00

1.00

..........................................................................TTGGGGTGCTGTTTCTG...............................................................................................................................................................

0.50