ID: uc003gjc.2_intron_7_0_chr4_6382822_r.5p
GENE: (1)
chr4:6473687-6473936-


(1)
AGO2.ip
(3)
BRAIN
(1)
BREAST
(4)
CELL-LINE
(6)
CERVIX
(1)
HEART
(1)
LIVER
(1)
OTHER
(25)
SKIN

Sense strand
GCGGAAAATTAACCACAGCTTCCTGCGGGACCACAGCTATGTGACTGAAGGTAACGTACGTGTTGTCTGAGACCCCTCCGGCCGGCCGCGGCGTGGGGATGCCGTCGCACCGAATGCCCTCCGAAGGTTTGGACCGCGCGATGTGTGTCGTGTCCCCCCGCCCCACCCCACCCCACCCCATCCCACCCCACCCCACCCCATCCCATCCCACCCTGCCCGGGGCCCAGGAGGGAGGGAGCCCGAGGGTACC
..............................................................................(((....)))..(((.(((((((.((.(((((....(((..(((((....)))))..)))....))))).))))))))).))).........................................................................................
........................................................................73......................................................................................161.......................................................................................
SizePerfect hitTotal NormPerfect NormSRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
GSM532877(GSM532877)
G691N. (cervix)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
GSM532875(GSM532875)
G547N. (cervix)
GSM532880(GSM532880)
G659T. (cervix)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040009(GSM532894)
G727T. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
GSM532881(GSM532881)
G696N. (cervix)
SRR189782SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040024(GSM532909)
G613N. (cervix)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
..........................................................................................................................................CGATGTGTGTCGTGTAGGG.............................................................................................1931.000.0031.00-----------------------------------------
..........................................................................................................................................................CCCCCGCCCCACCCCACGC.............................................................................1916.000.00-1.002.00-2.00--1.001.00-1.00-1.001.001.001.00--1.00--------1.00-----1.00---1.00----
..........................................................................................................................................................CCCCCGCCCCACCCCACGCGC...........................................................................215.000.00-1.00----1.001.001.00--------------------------1.00------
....................................CTATGTGACTGAAGGTGAT...................................................................................................................................................................................................192.000.00-----2.00------------------------------------
.........................................................ACGTGTTGTCTGAGAT.................................................................................................................................................................................161.000.00----------------1.00-------------------------
........................................GTGACTGAAGGTAACGTACGTGTT..........................................................................................................................................................................................2411.001.00-------------------1.00----------------------
.............................................................................CCGGCCGGCCGCGGCGC............................................................................................................................................................171.000.00---1.00--------------------------------------
........................................GTGACTGAAGGTAACGTAC...............................................................................................................................................................................................1911.001.00---------------------1.00--------------------
.....................................................................................CCGCGGCGTGGGGATTGA...................................................................................................................................................181.000.00--------------------------1.00---------------
.......................TGCGGGACCACAGCTATGTGACTGA..........................................................................................................................................................................................................2511.001.00-------------------------------1.00----------
.....................................................................................................................................CCGCGCGATGTGTGTCGTGTCCC..............................................................................................2311.001.00----------------------1.00-------------------
.......................................................................................................................................................................................................................CCCGGGGCCCAGGAGCCC.................181.000.00---1.00--------------------------------------
.........................................................................CCCTCCGGCCGGCCGTCCG..............................................................................................................................................................191.000.00------------------------------1.00-----------
......................................................................................................................CTCCGAAGGTTTGGACCGCGCG..............................................................................................................2211.001.00-----------1.00------------------------------
.......................................................................................................................................................................CCACCCCACCCCATCCCACCCCACCCCACCCC...................................................3211.001.001.00-----------------------------------------
..........................................................................................................................................................................................................CCATCCCACCCTGCCACCA.............................191.000.00-----------------------1.00------------------
.................................CAGCTATGTGACTGAAGCTG.....................................................................................................................................................................................................201.000.00-----------------------------1.00------------
.........................................................................................................................................................CCCCCCGCCCCACCCCACGC.............................................................................201.000.00------1.00-----------------------------------
.......................................................................................GCGGCGTGGGGATGCAGTC................................................................................................................................................191.000.00-----------------1.00------------------------
..........................................................................................................................................................CCCCCGCCCCACCCCACGT.............................................................................191.000.00---------1.00--------------------------------
..........................................................................................................................................................CCCCCGCCCCACCCCACGCC............................................................................201.000.00----------------------------------1.00-------
..........................................................................................................................................................CCCCCGCCCCACCCCACGCG............................................................................201.000.00----------------------------1.00-------------
........................................................................CCCCTCCGGCCGGCCGCCCC..............................................................................................................................................................201.000.00------------------------------------1.00-----
..........................................................................................................................................................CCCCCGCCCCACCCCATCCG............................................................................201.000.00------------------------1.00-----------------
...........................GGACCACAGCTATGTGAC.............................................................................................................................................................................................................1811.001.00---------1.00--------------------------------
..............................................................................................................................................................................................................CCCACCCTGCCCGGGGCC..........................1840.250.25--------------------------------------0.25---
.........................................................................................................................................................................................CCCCACCCCACCCCATCCCATCCCA........................................2550.200.20---------------------------------------0.20--
................................................................................................................................................................CCCCACCCCACCCCACCCCATCCCA.................................................................2560.170.17----------------------------------------0.17-
.......................................................................................................................................................GTCCCCCCGCCCCACCC..................................................................................1780.120.12-----------------------------------------0.12

Antisense strand
GCGGAAAATTAACCACAGCTTCCTGCGGGACCACAGCTATGTGACTGAAGGTAACGTACGTGTTGTCTGAGACCCCTCCGGCCGGCCGCGGCGTGGGGATGCCGTCGCACCGAATGCCCTCCGAAGGTTTGGACCGCGCGATGTGTGTCGTGTCCCCCCGCCCCACCCCACCCCACCCCATCCCACCCCACCCCACCCCATCCCATCCCACCCTGCCCGGGGCCCAGGAGGGAGGGAGCCCGAGGGTACC
..............................................................................(((....)))..(((.(((((((.((.(((((....(((..(((((....)))))..)))....))))).))))))))).))).........................................................................................
........................................................................73......................................................................................161.......................................................................................
SizePerfect hitTotal NormPerfect NormSRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
GSM532877(GSM532877)
G691N. (cervix)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
GSM532875(GSM532875)
G547N. (cervix)
GSM532880(GSM532880)
G659T. (cervix)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040009(GSM532894)
G727T. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
GSM532881(GSM532881)
G696N. (cervix)
SRR189782SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040024(GSM532909)
G613N. (cervix)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
....AAAATTAACCACAGCTTCCG.................................................................................................................................................................................................................................. 201.000.00-------------------------1.00----------------
.........................................................................................................................................................CCCCCCGCCCCACCCCAGCG............................................................................. 201.000.00--------------------------------1.00---------
.............................................................................CCGGCCGGCCGCGGCGCG........................................................................................................................................................... 181.000.00--------------------1.00---------------------