ID: uc003ggb.1_intron_5_0_chr4_2933881_r
GENE: (5)
chr4:2933831-2934127-


(1)
B-CELL 		(1)
BRAIN 		(2)
BREAST 		(11)
CELL-LINE 		(1)
CERVIX 		(1)
HELA 		(1)
LIVER 		(1)
OTHER 		(15)
SKIN

Sense strand
TGCTGTTCATCTTCTGCTTCCTGCCAGAGACGCTGCCCCTGGAGAAACGGGTAGGGCTGTGGTCTGGGACCCACAGGCCTAGGGGCTGGAGGCTTGATTCCATAGCGATGTAAAGTGCCCCTGTGTGCCAGCCCCAGATGCCAGGGAGGCTGGGCCGCTCTCTTGGTGTTGGGACCCTTGAGGCCACAGTCCGTGGGTTGCCAGGCCAGCAGCCGCTCCTGCAGGCTCTCCAATGCCATCCCCACAGGCGCCCTCTATCGCCCTGGGGTTCCGTGATGCGGCTGATCTGCTCAGCCC
...................................................((((.((((((........)))))).)))).((((.....))))..........................................................................................................................................................................................................
..................................................51..............................................99.....................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040021(GSM532906)
G761T_2. (cervix)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		TAX577739(Rovira)
total RNA. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)
............................................................................GCCTAGGGGCTGGAGAGGT..........................................................................................................................................................................................................1942.000.0040.001.00------1.00--------------------------
............................................................................GCCTAGGGGCTGGAGAGGG..........................................................................................................................................................................................................1919.000.0016.00--2.00----1.00--------------------------
............................................................................GCCTAGGGGCTGGAGATGT..........................................................................................................................................................................................................191.000.001.00----------------------------------
...................................CCCCTGGAGAAACGGGCGT...................................................................................................................................................................................................................................................191.000.00-------------------1.00---------------
.................................................................................................................................................................................................................................................................................TGATGCGGCTGATCTG........1611.001.00-----------------------------1.00-----
............................................................................GCCTAGGGGCTGGAGTGGT..........................................................................................................................................................................................................191.000.001.00----------------------------------
..................................GCCCCTGGAGAAACGG.......................................................................................................................................................................................................................................................1611.001.00-1.00---------------------------------
........................................................................................................................................................................................CACAGTCCGTGGGTTGCCAGGCCAGCAG.....................................................................................2811.001.00------------1.00----------------------
.....................................................................CCCACAGGCCTAGGGTC...................................................................................................................................................................................................................171.000.00-----------------------1.00-----------
...................................................TAGGGCTGTGGTCTGTAGA...................................................................................................................................................................................................................................191.000.00-----------------1.00-----------------
............................................................................................................................................................................................................................................................CTCTATCGCCCTGGGC.............................161.000.00---------------1.00-------------------
...............................................................................................................................................................................................................................................................TATCGCCCTGGGGTTCCGTGATG...................2311.001.00----------------1.00------------------
..................................................GTAGGGCTGTGGTCTGGGACC..................................................................................................................................................................................................................................2111.001.00---1.00-------------------------------
..................................................GTAGGGCTGTGGTCTGGGAC...................................................................................................................................................................................................................................2011.001.00-1.00---------------------------------
...................................................................GACCCACAGGCCTAGGGGCTGGAGGCTCG.........................................................................................................................................................................................................291.000.00----------------------------1.00------
..............................................ACGGGTAGGGCTGTGGGCCG.......................................................................................................................................................................................................................................201.000.00-------1.00---------------------------
.....................................................................................................................................................................................................................................................................CCTGGGGTTCCGTGATGCGGCT..............2211.001.00-----------1.00-----------------------
........................................................................................................................................................................................................CCAGGCCAGCAGCCGCGGTA.............................................................................201.000.00------------------1.00----------------
..................................................GTAGGGCTGTGGTCTGGGACG..................................................................................................................................................................................................................................2111.001.00---------------------------------1.00-

Antisense strand
TGCTGTTCATCTTCTGCTTCCTGCCAGAGACGCTGCCCCTGGAGAAACGGGTAGGGCTGTGGTCTGGGACCCACAGGCCTAGGGGCTGGAGGCTTGATTCCATAGCGATGTAAAGTGCCCCTGTGTGCCAGCCCCAGATGCCAGGGAGGCTGGGCCGCTCTCTTGGTGTTGGGACCCTTGAGGCCACAGTCCGTGGGTTGCCAGGCCAGCAGCCGCTCCTGCAGGCTCTCCAATGCCATCCCCACAGGCGCCCTCTATCGCCCTGGGGTTCCGTGATGCGGCTGATCTGCTCAGCCC
...................................................((((.((((((........)))))).)))).((((.....))))..........................................................................................................................................................................................................
..................................................51..............................................99.....................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040021(GSM532906)
G761T_2. (cervix)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		TAX577739(Rovira)
total RNA. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)
.........................................................................................................................................................................................................................................................CCAGGGCGATAGAGGGC............................... 1714.004.00-1.00-----------1.00-------1.00---------1.00---
......................................................................................................................................................................................................GCGGCTGCTGGCCTGGCA................................................................................. 1823.503.503.50----------------------------------
........................................................................................................................................................................CAACCCACGGACTGTGGCCTCAAGGGTCCCAA................................................................................................. 3212.002.00-----2.00-----------------------------
........................................................................................................................ATCTGGGGCTGGCACACAG.............................................................................................................................................................. 1912.002.00------2.00----------------------------
.........................................................................................................................................................................................................................ATTGGAGAGCCTGCAGG............................................................... 1712.002.00----2.00------------------------------
..........................................................................................TCGCTATGGAATCAAGCC............................................................................................................................................................................................. 1811.001.00---------1.00-------------------------
.........................................................................................................................................................................................CTGGCCTGGCAACCCACGGACTGT........................................................................................ 2411.001.00--------------------------------1.00--
...................CCTGCCAGAGACGCTGCCG................................................................................................................................................................................................................................................................... 191.000.00------------------------1.00----------
............CAGCGTCTCTGGCAGGAAGCAGA...................................................................................................................................................................................................................................................................... 2311.001.00--1.00--------------------------------
.................................................................................................................................................................................................................................................CCACAGGCGCCCTCTACCC..................................... 191.000.00-------1.00---------------------------
...............................................................................................................................................................................................................................................CCCCACAGGCGCCCTTGGT....................................... 191.000.00--------------------------1.00--------
...........................................................................................................................................................................GGACCCTTGAGGCCACAGTCCGTGGGTTGCCAGGCA.......................................................................................... 361.000.00---------------------------1.00-------
....................................................................................................................................................................................................................................TCCAATGCCATCCCCACTA.................................................. 191.000.00----------------------1.00------------
.........................................................................................................................................................................................CTGCTGGCCTGGCAACCCACGGACTGT..................................................................................... 2711.001.00----------1.00------------------------
.........................................................................................................................................................................................CTGGCAACCCACGGACTGT............................................................................................. 1911.001.00--1.00--------------------------------
.........................................................................................................................................................................................TGCTGGCCTGGCAACCCACGGACTGT...................................................................................... 2611.001.00--------------------1.00--------------
...........................................................................................................................................................................CACGGACTGTGGCCTCAAGGGTCC...................................................................................................... 2411.001.00----------------------------------1.00
....................................................................................................................................................................................................................................................................ATCACGGAACCCCAGGG.................... 1711.001.00------------------------------1.00----
...............................................................................................................................................................CTCTTGGTGTTGGGACC......................................................................................................................... 171.000.001.00----------------------------------
................................................................................................................................................................................................................TGGCATTGGAGAGCCTGCAGGAGCGGCTGC........................................................... 3011.001.00---------1.00-------------------------
.......................................................................................CACTTTACATCGCTATGGAATCAAGCCTCC.................................................................................................................................................................................... 3011.001.00--------------1.00--------------------
.............CAGCGTCTCTGGCAGGAAGCAG...................................................................................................................................................................................................................................................................... 2211.001.00-------------------------1.00---------
........................................................................................................................................................................................................................ATGGCATTGGAGAGCCTGCAGGA.......................................................... 2311.001.00--1.00--------------------------------
.........................................................................................................................................................................................................................TTGGAGAGCCTGCAGG................................................................ 1650.200.20-0.20---------------------------------