ID: uc003gel.2_intron_6_0_chr4_1988130_r.3p
GENE: (3)
chr4:1988080-1988329-


(2)
AGO1.ip 		(3)
AGO2.ip 		(1)
AGO3.ip 		(24)
B-CELL 		(9)
BRAIN 		(16)
BREAST 		(38)
CELL-LINE 		(2)
CERVIX 		(2)
FIBROBLAST 		(2)
HEART 		(8)
HELA 		(1)
KIDNEY 		(9)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(46)
SKIN 		(2)
UTERUS

Sense strand
GCAAAGTGTGAGGTCGTGGCTCCAGGCGTTCCCCTGCTCCTTGAGGTCCGGGATCCTGGGGGTCCTGCCCGCTGCCCGCCAGGGGTTTGGCCCTTCCCCTCTGCGGCGCTAGCCTAGAAGAGGGTGGGACGTTCTGAGCTCGGGGTGGGGGACGTTTGCCGGTCACTGCTGCTGGCGCCCTGACTGTTGCCGTCCTCCAGCCCCACTCAAAGGCATCCCGAAGCAGGCGCCCTTCAGAAGCCCCACGGCG
.................................................................................................................................................(((((((((...((((((((..((.......))..))))))..)))))))))))...................................................
...........................................................................................................................................140.........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189782SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR189783SRR189786GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189787DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		TAX577738(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR038859(GSM458542)
MM386. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189785SRR029128(GSM416757)
H520. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR038861(GSM458544)
MM466. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR038857(GSM458540)
D20. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR191558(GSM715668)
61genomic small RNA (size selected RNA from t. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)		SRR038862(GSM458545)
MM472. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR040027(GSM532912)
G220T. (cervix)
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAG..................................................211106.00106.007.009.0014.008.008.002.00--3.00--4.006.00--5.00-4.005.00-2.001.003.00--2.00---3.00----2.00--1.002.00-2.00------1.00----1.00-------2.001.00----------1.00-------------------1.00-------------------------------1.00-----------1.00----------------1.001.00-------1.001.00----
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGA.................................................23194.0039.0038.00------3.00-2.00---2.002.00-1.00----2.00-2.00--1.001.001.00------2.00-----1.00-1.00-1.001.00----2.00-1.001.002.00-2.001.002.00-1.00--2.00-1.00-2.00--1.00-1.001.00------1.00----1.00----------1.00---1.00------1.00-1.00---1.00----1.00-------1.00--1.00------------1.00--1.00---1.00-----------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGT.................................................23181.0039.0041.003.00----4.002.00-1.002.00--2.00--1.00--1.00---1.00---1.00-1.00-1.00-----------1.00--1.00-1.00-------------1.002.00-----1.00----1.00-------1.00-1.00--1.001.00-----1.00--------------1.00---------------1.00-----1.00------1.00---------1.00------1.00-1.00----------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGT.................................................22169.00106.0043.001.00----1.001.00-2.00---1.00----------1.00--1.00--2.00-2.001.00-----2.00-1.00--1.00--1.00--------------1.00--------1.00-------------------------------1.00------------1.00---1.00------------------------1.00-----1.00-------1.00--------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGA.................................................22141.00106.004.00-------1.00-1.00---3.00-3.00------1.003.00-3.00--------1.00------3.00--1.00------1.001.001.00----------1.001.00--1.00-------1.00-1.00-------------------------1.00-1.00-----1.00--------1.00------1.00-----------1.00--------------1.00---1.00-----1.00-
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAG..................................................22139.0039.007.0015.00---7.00---1.001.00----------------------------1.00---------1.00---------------------------------------------1.00--------1.00-------1.00----------1.00--------1.00-------------------1.00---------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGAA................................................23116.00106.00---2.001.00---2.00--2.00--------2.00----2.00--------1.00--1.00------------1.00---------------------1.00-------1.00---------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCA...................................................21110.0010.002.00---------2.00--1.00--------------1.00---------------1.00---------------------------------1.00-----------1.00--------------------1.00--------------------------------------------------------
................................................................................................................................................GTGGGGGACGTTTGCCGGTCAC....................................................................................2218.008.006.00------------------2.00----------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGTT................................................2416.0039.005.00-----------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCA...................................................2015.005.00-1.00--------------------1.00-------1.00------------------1.00------------------------------------------------1.00---------------------------------------------------------------------
................................................................................................................................................GTGGGGGACGTTTGCCGGTCACT...................................................................................2314.004.003.00-----------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCC....................................................2014.004.00-1.00-----------------1.00--------------------------------------------------1.00----------------------------------------------------------------1.00--------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGAT................................................2313.00106.00-------------------------------------------------------------------------1.00--------------------------------1.00---------------------------1.00---------------------------------
................................................................................................................................................GTGGGGGACGTTTGCCGGTCA.....................................................................................2113.003.002.00---------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................GTGGGGGACGTTTGCCGGTCACTGT.................................................................................2513.003.00-2.00-----------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------
................................................................................................................................................GTGGGGGACGTTTGCCGGTCACTGA.................................................................................2513.003.00-2.00----------------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------
................................................................................................................................................GTGGGGGACGTTTGCCGGTCACTG..................................................................................2413.003.00-2.00------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGCATC..............................................2613.002.00------------------------------------3.00-----------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGG.................................................2312.0039.00-------------------------------2.00----------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGATT...............................................2412.00106.00------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------1.00--
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGAA................................................2412.0039.00---------------------------------------------------------------------------------------------1.00-----1.00--------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGAT................................................2412.0039.00--------------------------------------------------1.00------------------------------------------------------------------1.00--------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGTA................................................2312.00106.00--------------------------------------------------------1.00----------------------------------------------------------------------------1.00----------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGC.................................................2312.002.00------1.00-------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
..............................................................................CCAGGGGTTTGGCCCCA...........................................................................................................................................................171.000.00-----------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCC.......................................................1711.001.00---------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................CCGTCCTCCAGCCCCACGATC........................................211.000.00-----------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................GGTGGGGGACGTTTGCGC.........................................................................................181.000.00-------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGAGT...............................................2411.00106.00-------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAA..................................................2211.0010.00----------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAT..................................................2211.0010.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................CCCTTCAGAAGCCCCCAGC..191.000.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCATTAT...............................................2511.0010.00-----------------------------------------------------------------------------------------------------------------------------------------1.00------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTTTAG..................................................211.000.00----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCA......................................................1811.001.00-------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GAAGCAGGCGCCCTTATGT............191.000.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00---
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGG.................................................2211.00106.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................CAGGGGTTTGGCCCTATG.........................................................................................................................................................181.000.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGTTT...............................................2411.00106.00--------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTC........................................................1611.001.00---------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGTAT...............................................2411.00106.00----------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCT....................................................2011.001.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCCGT.................................................2311.004.00-------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGTAA...............................................2411.00106.00---------------------------------------------------------------------------------------------------------------------------------------------------1.00--------------------
...............................................................................................................................................................................................GTCCTCCAGCCCCACGACG........................................191.000.00----------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------
....................................................................................................................................................................................TGACTGTTGCCGTCCTCCAGT.................................................211.000.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCCCAG...................................................201.000.00-----------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................GTGGGGGACGTTTGCCGGTCACTGC.................................................................................2511.001.00------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGTATT..............................................2611.0039.00---------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGCT................................................2411.002.00------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAGC.................................................2211.001.00----------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGCA................................................2411.002.00----------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................CCCTGACTGTTGCCGTCCTCCAGT.................................................241.000.00-----------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCCG..................................................2111.001.00--------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GAAGCAGGCGCCCTTATCT............191.000.00-----------------------------------------------------------------------------------------------------------------------------------------------------1.00------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTC.....................................................1911.001.00----------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCCAAA.................................................2211.005.00--------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAATTT...............................................2511.0010.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TGCGGCGCTAGCCTAACAT..................................................................................................................................191.000.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGACTGTTGCCGTCCTCC....................................................1911.001.00--------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------
..................................................................................................................................................................................CCTGACTGTTGCCGTCCTCCAGTTT...............................................2511.0039.00-----------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------
.................................................................................................................................................TGGGGGACGTTTGCCGGTCACTGC.................................................................................2411.001.00---------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................GTGGGGGACGTTTGCCGGTCAA....................................................................................2211.003.00------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------
....................................................................................................................................................................................................................GCATCCCGAAGCAGGCGCCCGTCA..............241.000.00----------------------------------------------------------------------------------------------------------------------------------------------1.00-------------------------

Antisense strand
GCAAAGTGTGAGGTCGTGGCTCCAGGCGTTCCCCTGCTCCTTGAGGTCCGGGATCCTGGGGGTCCTGCCCGCTGCCCGCCAGGGGTTTGGCCCTTCCCCTCTGCGGCGCTAGCCTAGAAGAGGGTGGGACGTTCTGAGCTCGGGGTGGGGGACGTTTGCCGGTCACTGCTGCTGGCGCCCTGACTGTTGCCGTCCTCCAGCCCCACTCAAAGGCATCCCGAAGCAGGCGCCCTTCAGAAGCCCCACGGCG
.................................................................................................................................................(((((((((...((((((((..((.......))..))))))..)))))))))))...................................................
...........................................................................................................................................140.........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189782SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR189783SRR189786GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189787DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		TAX577738(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR038859(GSM458542)
MM386. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189785SRR029128(GSM416757)
H520. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR038861(GSM458544)
MM466. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR038857(GSM458540)
D20. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR191558(GSM715668)
61genomic small RNA (size selected RNA from t. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)		SRR038862(GSM458545)
MM472. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR040027(GSM532912)
G220T. (cervix)
....................................................................CCGCTGCCCGCCAGGTG..................................................................................................................................................................... 175.000.00---------1.00---------1.00-------------1.00---------------------------------------------------1.00------------------------------------------------------------------------1.00---------
......................................................................GCTGCCCGCCAGGGGTGTG................................................................................................................................................................. 192.000.00-------------------------------------1.00-----------------------------------------------------1.00----------------------------------------------------------------------------
......................................................................................TTGGCCCTTCCCCTCTGCG................................................................................................................................................. 191.000.00--------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------
......................................................................................................................................................................................................................................CCTTCAGAAGCCCCACCC.. 181.000.00-------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------
...........................................................................................................................................................................................GTGGGGCTGGAGGACGGCA............................................ 1911.001.00----------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................CGTCCTCCAGCCCCAATG.......................................... 181.000.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................CGGCAACAGTCAGGGC.......................................................... 1611.001.00---------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................GCCGTCCTCCAGCCCTATG........................................... 191.000.00----------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------
......................................................................GCTGCCCGCCAGGGGTGGG................................................................................................................................................................. 191.000.00-------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------
......................................................................................................................................................................................GGGGCTGGAGGACGGCAACAGT.............................................. 2211.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------1.00------
.......................................................................................................................................CCCCACCCCGAGCTC.................................................................................................... 1580.120.12----------0.12-------------------------------------------------------------------------------------------------------------------------------------------------------------