ID: uc003fyx.3_intron_2_0_chr3_197792678_r.3p
GENE: ANKRD18DP(7)
chr3:197792628-197792877-


(2)
B-CELL
(1)
BRAIN
(3)
BREAST
(14)
CELL-LINE
(1)
CERVIX
(1)
OTHER
(1)
SKIN
(1)
TESTES

Sense strand
GCGTGTAGTTATTATTTACTAGGTATTTATTATGTTCGTGAGATGCCATCCACCTTTAAATTTGTGGTGATGAGCACAAGCTTCTGAAACATGGATGGGATTTAGGGTAAGCATGCAGAGCGAGTGAAACTTTGCCATGTAAGGAGGCAGAGGGGTGATGTTTTGCAGAAGGAATATCTAACAACTTGCACGTTTGACAGAAACAACAGCTATGAAGCCTGCAAATTTGTAAAAAGGAGAAGAAGGTGCA
...............................................................................(((((((((.((....))...))))))...)))..((((((((.......(((((((.........)))))))......))))))))....................................................................................
.......................................................................72............................................................................................166..................................................................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR029128(GSM416757)
H520. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR189782SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR040025(GSM532910)
G613T. (cervix)
TAX577579(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
SRR189786SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
............................................................................CAAGCTTCTGAAACACCA............................................................................................................................................................1884.000.0048.0029.00--3.003.001.00-------------------
............................................................................CAAGCTTCTGAAACACCAA...........................................................................................................................................................1924.000.008.006.00--4.001.002.002.00----------------1.00-
............................................................................CAAGCTTCTGAAACACC.............................................................................................................................................................1714.000.005.00-9.00-----------------------
..............................................................TGTGGTGATGAGCACAAGCTTCTGAAA.................................................................................................................................................................2719.009.00---------2.002.00---1.00-1.00-1.001.00--1.00---
...............................................................................................................................................................GTTTTGCAGAAGGAATATCTAACAAC.................................................................2612.002.00------------2.00-------------
.........................................................................................................................................................................................................................................AAGGAGAAGAAGGTGCTC181.000.00---------------1.00----------
.................................................................................................................................................................................................................................TTTGTAAAAAGGAGAAGAAGGTGC.2411.001.00-----------1.00--------------
............................................................................CAAGCTTCTGAAACAAAA............................................................................................................................................................181.000.00-1.00------------------------
............................................................................CAAGCTTCTGAAACACCC............................................................................................................................................................181.000.00-1.00------------------------
..............................................................................................................................................GGAGGCAGAGGGGTGAAGAG........................................................................................201.000.00--------1.00-----------------
.............................................................................................................................................................................................................................CAAATTTGTAAAAAGGAGAAGAAGG....2511.001.00-----------1.00--------------
...........................................................................................TGGATGGGATTTAGGAC..............................................................................................................................................171.000.00-----------------1.00--------
.........................................................................................................................................TGTAAGGAGGCAGAGTTG...............................................................................................181.000.00-----------------------1.00--
....................................................................................................................................................................GCAGAAGGAATATCTTTTT...................................................................191.000.00--------1.00-----------------

Antisense strand
GCGTGTAGTTATTATTTACTAGGTATTTATTATGTTCGTGAGATGCCATCCACCTTTAAATTTGTGGTGATGAGCACAAGCTTCTGAAACATGGATGGGATTTAGGGTAAGCATGCAGAGCGAGTGAAACTTTGCCATGTAAGGAGGCAGAGGGGTGATGTTTTGCAGAAGGAATATCTAACAACTTGCACGTTTGACAGAAACAACAGCTATGAAGCCTGCAAATTTGTAAAAAGGAGAAGAAGGTGCA
...............................................................................(((((((((.((....))...))))))...)))..((((((((.......(((((((.........)))))))......))))))))....................................................................................
.......................................................................72............................................................................................166..................................................................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR029128(GSM416757)
H520. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR189782SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR040025(GSM532910)
G613T. (cervix)
TAX577579(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
SRR189786SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
............................................................................CAAGCTTCTGAAACAGATC........................................................................................................................................................... 1913.000.00---13.00----------------------
............................................................................CAAGCTTCTGAAACAGT............................................................................................................................................................. 176.000.001.00-5.00-----------------------
.....................................................................................................................................................................................................................GAAGCCTGCAAATTTGTC................... 181.000.00---------------------1.00----
.....................................................................................................................................................................................................................................TAAAAAGGAGAAGAAATAG.. 191.000.00-------------1.00------------
......................................................................................................................................................AGGGGTGATGTTTTGAGCA................................................................................. 191.000.00--------------------1.00-----
....................................................................................................................................................................................................................................GTAAAAAGGAGAAGACCA.... 181.000.00-------------------------1.00
..................................................................................................................................................................................................................................CTTCTCCTTTTTACAA........ 1660.170.17-------------0.17------------