ID: uc003fwm.3_intron_9_0_chr3_196134265_r.3p
GENE: (1)
chr3:196134215-196134464-


(1)
BREAST
(10)
CELL-LINE
(1)
HEART
(1)
OTHER
(1)
SKIN

Sense strand
CTAAATTCTTTTCTAGCTCTGTATTTCACTTCAAGAATGTCTACATTTTTTTCTAGCTCTGTGTATTTCACAAGAAAGTCATTCATTCTAAAAGGGAAAAATACTATTAATTTACTTGGGAATTCTAATATGAGCTGAAGAAAGAGGCTGTCTTTTTTTTTTTTTTTTTTAACGTTTTTCCTGTCTTTTTACTGTTTCAGGTGCAAGTGAAAGTGTAGGAAAACATATGCTTGAAGCGTGCAACAATAAT
..............................................................................................(((((((.((......(((.(((.((...((......)).)).))))))......)).)))))))...........................................................................................
..............................................................................................95...........................................................................172............................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189786SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343334SRR189784SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR191426(GSM715536)
149genomic small RNA (size selected RNA from . (breast)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR189785SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTC..................................................................................2494.000.0058.0035.00-----1.00-----------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTC.....................................................................................2145.000.0038.007.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTCTTT...................................................................................2342.000.0037.005.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTCTTT..................................................................................2441.000.0030.0011.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTTC................................................................................2636.000.0019.0017.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTCTT..................................................................................2433.000.0023.0010.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTCT...................................................................................2333.000.0027.005.00-----1.00-----------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTCTT...................................................................................2331.000.0021.0010.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTA..................................................................................2429.000.0015.0014.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTA...................................................................................2329.000.0010.0019.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTCTTT.................................................................................2527.000.0019.008.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTCT....................................................................................2218.000.0015.002.00-----1.00-----------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTAAAG................................................................................2617.000.007.0010.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTCT.................................................................................2517.000.009.008.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTTTA...............................................................................27115.0015.009.006.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTAAAG.................................................................................2515.000.007.008.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTCTTT....................................................................................2214.000.0011.003.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTCTT....................................................................................2214.000.0011.003.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTCT.....................................................................................2113.000.0012.00-----------1.00------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTTTC...............................................................................2712.000.004.008.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTCT................................................................................2612.000.006.006.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTAA.................................................................................2510.000.004.006.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTCTC...................................................................................2310.000.008.002.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTAAAG..................................................................................2410.000.008.002.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTAAAG...............................................................................2710.000.003.007.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTAAAG...................................................................................239.000.005.004.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTCTT................................................................................268.000.003.005.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTAAAG....................................................................................227.000.002.005.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTCTC.................................................................................256.000.002.004.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTCTT...............................................................................276.000.006.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTCTTA................................................................................266.000.004.002.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTAA..................................................................................246.000.004.002.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTCC...................................................................................235.000.003.002.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTAA......................................................................................205.000.004.001.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTTAAAG.............................................................................295.000.003.002.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTCTTC.................................................................................255.000.002.003.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTTCT...............................................................................275.000.003.002.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTAAAG.....................................................................................214.000.002.002.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTCA..................................................................................244.000.003.001.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTCTTC..................................................................................244.000.003.001.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTCC....................................................................................224.000.001.003.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTCAA.................................................................................254.000.001.003.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTTAA...............................................................................274.000.003.001.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTCA.................................................................................254.000.004.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTCTTA.................................................................................254.000.003.001.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTTTCT..............................................................................284.000.001.003.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTCC.................................................................................253.000.002.001.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTCTTC...................................................................................233.000.001.002.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTCTA.................................................................................253.000.001.002.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTCCT.................................................................................253.000.003.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTCTC....................................................................................223.000.002.001.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTCTA................................................................................263.000.002.001.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTCTCT...................................................................................233.000.002.001.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTCTA...................................................................................233.000.001.002.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTCTTA...................................................................................233.000.002.001.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTCA....................................................................................223.000.001.002.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTAAA.................................................................................253.000.001.002.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTCTTT...............................................................................273.000.002.001.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTCTC..................................................................................243.000.002.001.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTCTTT..............................................................................282.000.00-2.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTCTTA.......................................................................................192.000.00-2.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTCAA................................................................................262.000.00-2.00-----------------
................................................................................................................................................................TTTTTTTTTTAACGTTGCAC......................................................................202.000.00----------1.00------1.00-
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTTCTTT.............................................................................292.000.001.001.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTCTTT......................................................................................202.000.00-2.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTTCA...............................................................................272.000.001.001.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTCTA......................................................................................202.000.001.001.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTAAA..................................................................................242.000.00-2.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTTCTA..............................................................................282.000.001.001.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTCA................................................................................262.000.002.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTCTTA....................................................................................222.000.00-2.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTCCTT..................................................................................242.000.001.001.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTCTCT....................................................................................222.000.00-2.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTCTCA......................................................................................202.000.00-2.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTTCCC..............................................................................282.000.00-2.00-----------------
.........................................................................................................................................................TTTTTTTTTTTTTTTTTAACGGGGG........................................................................252.000.00-2.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTCTTC................................................................................262.000.00-2.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTCTTA..................................................................................242.000.001.001.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTGT....................................................................................222.000.002.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTCTA..................................................................................242.000.00-2.00-----------------
....................................................................................................................................................TGTCTTTTTTTTTTTTTTTTTTAAGGC...........................................................................271.000.001.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTCTCT.................................................................................251.000.001.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTCCCT...................................................................................231.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTTAACG.............................................................................291.000.001.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTTTCTC.............................................................................291.000.00-1.00-----------------
.................................................................................................................................................GGCTGTCTTTTTTTTTTTTTCTAA.................................................................................241.000.00-1.00-----------------
..............................................................................................................................................AGAGGCTGTCTTTTTTTTTTTTTTTTTTCCT.............................................................................311.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTGG........................................................................................181.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTCTC......................................................................................201.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTGCC...................................................................................231.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTTGAG..............................................................................281.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTATC................................................................................261.000.00-1.00-----------------
.........................................................................................................................................................TTTTTTTTTTTTTTTTTAACGTTTTTG......................................................................271.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTCCTC.................................................................................251.000.001.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTCTC.....................................................................................211.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTCAA......................................................................................201.000.001.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTG....................................................................................221.000.001.00------------------
...........................................................................................................................................................TTTTTTTTTTTTTTTAACGTTTTCG......................................................................251.000.001.00------------------
........................................................................................................................................................TTTTTTTTTTTTTTTTTTAACGGCCC........................................................................261.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTGA....................................................................................221.000.001.00------------------
.......................................................................................................................................................CTTTTTTTTTTTTTTTTTTAACGGG..........................................................................251.000.00-1.00-----------------
..................................................................................................................................................GCTGTCTTTTTTTTTTTTTTTTTTAAAG............................................................................281.000.00------1.00------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTCCCT..................................................................................241.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTCCT................................................................................261.000.00-1.00-----------------
..........................................................................................................................................................TTTTTTTTTTTTTTTTAACGACGG........................................................................241.000.00-1.00-----------------
......................................................................................................................................................TCTTTTTTTTTTTTTTTTTTAACCAAG.........................................................................271.000.00------1.00------------
...................................................................................................AATACTATTAATTTATTTT....................................................................................................................................191.000.00---1.00---------------
................................................................................................................TACTTGGGAATTCTAATATG......................................................................................................................2011.001.00---------------1.00---
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTCCA...................................................................................231.000.001.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTCTCT...............................................................................271.000.001.00------------------
......................................................................................................................................................TCTTTTTTTTTTTTTTTTTTAACG............................................................................2491.001.00----0.560.330.11------------
......................................................................................................................................................TCTTTTTTTTTTTTTTTTTTAACCCC..........................................................................261.000.00-----1.00-------------
............................................................................................................................................................TTTTTTTTTTTTTTAACGTTTCCTA.....................................................................251.000.00-----------1.00-------
......................................................................................................................................................TCTTTTTTTTTTTTTTTTTTAACCTGG.........................................................................271.000.00-----1.00-------------
........................................................................................................................................................TTTTTTTTTTTTTTTTTTAACGGGGA........................................................................261.000.001.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTCCT...................................................................................231.000.001.00------------------
..................................................................................................................................................GCTGTCTTTTTTTTTTTTTTTTTTAAAT............................................................................281.000.00---1.00---------------
..................................................................................................................................TGAGCTGAAGAAAGAGGAAG....................................................................................................201.000.00-------------1.00-----
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTAAG..................................................................................241.000.00-1.00-----------------
.........................................................................................................................................................TTTTTTTTTTTTTTTTTAACGGCG.........................................................................241.000.00-1.00-----------------
.............................................................................................................................................................................................................................AACATATGCTTGAAGCGTGCAACAACAA.281.000.001.00------------------
............................................................................................................................................................TTTTTTTTTTTTTTAACGTCTTG.......................................................................231.000.00----1.00--------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTACC...............................................................................271.000.001.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTTAAG..............................................................................281.000.00-1.00-----------------
.......................................................................................................................................................CTTTTTTTTTTTTTTTTTTAACGTTG.........................................................................261.000.00------------------1.00
.......................................................................................................................................................................................TCTTTTTACTGTTTCACTGC...............................................201.000.00---1.00---------------
......................................................................................................................................................TCTTTTTTTTTTTTTTTTTTAACCCGG.........................................................................271.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTTTCTT.............................................................................291.000.001.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTCCT..................................................................................241.000.001.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTATT...................................................................................231.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTCTCA...................................................................................231.000.001.00------------------
........................................................................................................................................................TTTTTTTTTTTTTTTTTTAACGTCCTG.......................................................................271.000.00---1.00---------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTTCAA..............................................................................281.000.001.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTCCA.................................................................................251.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTAAG.....................................................................................211.000.00-1.00-----------------
......................................................................................................................................................TCTTTTTTTTTTTTTTTTTTAACCGG..........................................................................261.000.00-----1.00-------------
.............................................................................................................................................................................................................AGTGAAAGTGTAGGAAAACATATGCT...................2611.001.00---------1.00---------
....................................................................................................................................................TGTCTTTTTTTTTTTTTTTTTTAAGC............................................................................261.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTTAAAC.............................................................................291.000.001.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTCCTT................................................................................261.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTAAG.................................................................................251.000.00-1.00-----------------
......................................................................................................................................................TCTTTTTTTTTTTTTTTTTTAACCG...........................................................................251.000.00----1.00--------------
............................................................................................................................................................TTTTTTTTTTTTTTAACGTTTACGG.....................................................................251.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTAAGG................................................................................261.000.001.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTCTC................................................................................261.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTTTCA..............................................................................281.000.00-1.00-----------------
..................................................................................................................................................GCTGTCTTTTTTTTTTTCAAT...................................................................................211.000.00------1.00------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTCTAT.................................................................................251.000.001.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTAT...................................................................................231.000.001.00------------------
.....................................................................................................................................................GTCTTTTTTTTTTTTTTTTTTAATGTT..........................................................................271.000.00---1.00---------------
......................................................................................................................................................TCTTTTTTTTTTTTTTTTTTAACCTCC.........................................................................271.000.00----1.00--------------
..............................................................................................................................................AGAGGCTGTCTTTTTTTTTTTTTAACG.................................................................................271.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTTCC...............................................................................271.000.001.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTCG................................................................................261.000.001.00------------------
......................................................................................................................................................................................................................GTAGGAAAACATATGCTTGAAGCGTGC.........2711.001.00---------1.00---------
................................................................................................................................................AGGCTGTCTTTTTTTTTTCCTC....................................................................................221.000.00-1.00-----------------
.............................................................................................................................................AAGAGGCTGTCTTTTTTTTTTTTTTTTTT................................................................................2911.001.00-1.00-----------------
...............................................................................................................................................GAGGCTGTCTTTTTTTTTTTTTTCTTT................................................................................271.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTTCTC..............................................................................281.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTCTA....................................................................................221.000.001.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTCCTT...............................................................................271.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTCAA.....................................................................................211.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTTCTTA.............................................................................291.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTAGAG................................................................................261.000.00-1.00-----------------
.........................................................................................................................................................TTTTTTTTTTTTTTTTTAACGTGC.........................................................................241.000.001.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTTGGT..............................................................................281.000.001.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTCA........................................................................................181.000.00-1.00-----------------
................................................................................................................................................AGGCTGTCTTTTTTTTTCA.......................................................................................191.000.001.00------------------
................................................................................................................................................AGGCTGTCTTTTTTTTTTTTTTTTCTA...............................................................................271.000.00-1.00-----------------
...............................................................................................................................................GAGGCTGTCTTTTTTTTTTTTTTTTTT................................................................................2740.250.25-0.25-----------------
......................................................................................................................................................TCTTTTTTTTTTTTTTTTTTAACGATG.........................................................................2790.111.00-0.11-----------------

Antisense strand
CTAAATTCTTTTCTAGCTCTGTATTTCACTTCAAGAATGTCTACATTTTTTTCTAGCTCTGTGTATTTCACAAGAAAGTCATTCATTCTAAAAGGGAAAAATACTATTAATTTACTTGGGAATTCTAATATGAGCTGAAGAAAGAGGCTGTCTTTTTTTTTTTTTTTTTTAACGTTTTTCCTGTCTTTTTACTGTTTCAGGTGCAAGTGAAAGTGTAGGAAAACATATGCTTGAAGCGTGCAACAATAAT
..............................................................................................(((((((.((......(((.(((.((...((......)).)).))))))......)).)))))))...........................................................................................
..............................................................................................95...........................................................................172............................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189786SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343334SRR189784SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR191426(GSM715536)
149genomic small RNA (size selected RNA from . (breast)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR189785SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.......................................................................................................................................................CTTTTTTTTTTTTTTTTTTAACGT........................................................................... 2431.000.00--31.00----------------
.........................................................................................................................................................TTTTTTTTTTTTTTTTTAACGTGT......................................................................... 2416.000.00--16.00----------------
........................................................................................................................................................TTTTTTTTTTTTTTTTTTAACGTAGT........................................................................ 266.000.00--6.00----------------
........................................................................................................................................................TTTTTTTTTTTTTTTTTTAACGTAG......................................................................... 255.000.00--5.00----------------
.......................................................................................................................................................CTTTTTTTTTTTTTTTTTTAACGTT.......................................................................... 253.500.00--3.50----------------
..............................................................................................................................................................TTTTTTTTTTTTAACGTTGT........................................................................ 203.000.00--3.00----------------
.........................................................................................................................................................TTTTTTTTTTTTTTTTTAACGGGT......................................................................... 242.000.00--2.00----------------
........................................................................................................................................................TTTTTTTTTTTTTTTTTTAACGTAT......................................................................... 252.000.00--2.00----------------
..............................................................................................................................................................CGTTAAAAAAAAAAAA............................................................................ 1602.002.00--------2.00----------
........................................................................................................................................................TTTTTTTTTTTTTTTTTTAACGCG.......................................................................... 242.000.00--2.00----------------
.........................................................................................................................................................TTTTTTTTTTTTTTTTTAACGTGT......................................................................... 242.000.00--2.00----------------
........................................................................................................................................................TTTTTTTTTTTTTTTTTTAACGTAAT........................................................................ 262.000.00--2.00----------------
........................................................................................................................................................TTTTTTTTTTTTTTTTTTAACGTAAAT....................................................................... 272.000.00--2.00----------------
.............................................................................................................................................................TTTTTTTTTTTTTAACGTTGT........................................................................ 212.000.00--2.00----------------
..........................................................................................................................................................TTTTTTTTTTTTTTTTAACGTTGT........................................................................ 242.000.00--2.00----------------
.......................................................................................................................................................ACGTTAAAAAAAAAAAAAAAAAAG........................................................................... 2441.501.50--1.50----------------
........................................................................................................................................................TTTTTTTTTTTTTTTTTTAACGTAATG....................................................................... 271.000.00--1.00----------------
..........................................................................................................................................................TTTTTTTTTTTTTTTTAACGCG.......................................................................... 221.000.00--1.00----------------
...............................................................................................................................................GAGGCTGTCTTTTTTTCACC....................................................................................... 201.000.00--------------1.00----
...........................................................................................................................................................TTTTTTTTTTTTTTTAACGTGATG....................................................................... 241.000.00--1.00----------------
........................................................................................................................................................TTTTTTTTTTTTTTTTTTAACGTCG......................................................................... 251.000.00--1.00----------------
........................................................................................................................................................TTTTTTTTTTTTTTTTTTAACGTATT........................................................................ 261.000.00--1.00----------------
................................................................................................................................................................................................TGTTTCAGGTGCAAGAGC........................................ 181.000.00----------------1.00--
........................................................................................................................................................TTTTTTTTTTTTTTTTTTAACGTACG........................................................................ 261.000.00--1.00----------------
...........................................................................................................................................................TTTTTTTTTTTTTTTAACGTCG......................................................................... 221.000.00--1.00----------------
.........................................................................................................................................................TTTTTTTTTTTTTTTTTAACGTTT......................................................................... 241.000.00--1.00----------------
............................................................................................................................................................TTTTTTTTTTTTTTAACGCG.......................................................................... 201.000.00--1.00----------------
............................................................................................................................................................TTTTTTTTTTTTTTAACGTCACC....................................................................... 231.000.00--1.00----------------
........................................................................................................................................................TTTTTTTTTTTTTTTTTTAACGTAAGG....................................................................... 271.000.00--1.00----------------
.........................................................................................................................................................TTTTTTTTTTTTTTTTTAACGTGTT........................................................................ 251.000.00--1.00----------------
.........................................................................................................................................................TTTTTTTTTTTTTTTTTAACGTG.......................................................................... 231.000.00--1.00----------------
........................................................................................................................................................TTTTTTTTTTTTTTTTTTAACGTG.......................................................................... 241.000.00--1.00----------------
............................................................................................................................................................TTTTTTTTTTTTTTAACGTCG......................................................................... 211.000.00--1.00----------------
.......................................................................................................................................................CTTTTTTTTTTTTTTTTTTAACGTG.......................................................................... 250.250.00--0.25----------------