ID: uc003fvz.3_intron_5_0_chr3_195787119_r.5p
GENE: (13)
chr3:195789253-195789502-


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(3)
AGO2.ip 		(2)
AGO3.ip 		(8)
B-CELL 		(3)
BRAIN 		(2)
BREAST 		(27)
CELL-LINE 		(1)
CERVIX 		(2)
HEART 		(6)
HELA 		(3)
LIVER 		(2)
OTHER 		(11)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
CCTGCATTTAAAGGCTTTCACTTATATTAATCTGGATAAAGCGGTTCTTGGTAAGTATCCCTTTCATTAGCTGTGTATGAATTCAGGTAAACTTTTTTGAGATGGAGTTTTGCTCTTGTCGCCCAGGCTGGAGTGCAATGGCACGATCTCGGCTCACTGCAACCTCTGTCTCCCAGATTCAAGCGATTCTCCTGCCTTAGCCTCCTGAGTAGCTGGGATTACAGGTGCTCACTACCACACCCAGCTAATT
.......................................................................................................((......(((((.(((.....))).)))))(((.((((.((....)))).)).)))..))......................................................................................
.......................................................................................................104...........................................................166..................................................................................
SizePerfect hitTotal NormPerfect NormGSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR037943(GSM510481)
293DcrTN. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR189782SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR040014(GSM532899)
G623N. (cervix)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR038856(GSM458539)
D11. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		TAX577743(Rovira)
total RNA. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
............................................................................................................................................GCACGATCTCGGCTCACTGCAT........................................................................................2212.000.008.00-------2.00-1.00-----------------------1.00-----------------------------------
............................................................................................................................................GCACGATCTCGGCTCACTGCT.........................................................................................219.000.008.00---------------------------------------------------------1.00-----------
.............................ATCTGGATAAAGCGGTT............................................................................................................................................................................................................1718.008.00-----7.00------------------------------------------------------1.00---------
............................................................................................................................................GCACGATCTCGGCTCACTGCTA........................................................................................227.000.006.00---------------------1.00-----------------------------------------------
....................................................................................................................................GTGCAATGGCACGATCTCGGCTCACTGC..........................................................................................2805.005.00------4.00-----1.00---------------------------------------------------------
.............................................................................................................................................CACGATCTCGGCTCACTGCTA........................................................................................215.000.005.00---------------------------------------------------------------------
............................................................................................................................................GCACGATCTCGGCTCACTGCATAAG.....................................................................................255.000.00----5.00-----------------------------------------------------------------
..............................TCTGGATAAAGCGGTTCTTGGT......................................................................................................................................................................................................2215.005.00---4.00-----------------------1.00------------------------------------------
.............................................................................................................................................CACGATCTCGGCTCACTGCTGA.......................................................................................224.000.00----4.00-----------------------------------------------------------------
...........................TAATCTGGATAAAGCGGT.............................................................................................................................................................................................................1813.003.00-----3.00----------------------------------------------------------------
.........................ATTAATCTGGATAAAGCGGT.............................................................................................................................................................................................................2013.003.00---1.00---2.00--------------------------------------------------------------
................................................................................................................................................................................................TGCCTTAGCCTCCTGAGTAGCCGGA.................................253.000.00--3.00-------------------------------------------------------------------
............................................................................................................................................GCACGATCTCGGCTCACTGCACTT......................................................................................243.000.003.00---------------------------------------------------------------------
.............................................................................................................................................CACGATCTCGGCTCACTGCAT........................................................................................212.000.00--------1.00------------1.00------------------------------------------------
.......................ATATTAATCTGGATAAAG.................................................................................................................................................................................................................1812.002.00----------------------------2.00-----------------------------------------
...................................................................................................................................AGTGCAATGGCACGATCTCGGAA................................................................................................232.000.00-------------------------------------------------------------1.00------1.00-
............................................................................................................................................GCACGATCTCGGCTCACTGCATAAT.....................................................................................252.000.00-----------------------2.00----------------------------------------------
............................................................................................................TTTGCTCTTGTCGCCCAGGCGAG.......................................................................................................................232.000.00-2.00--------------------------------------------------------------------
.............................................................................................................................................CACGATCTCGGCTCACTGCTTTT......................................................................................232.000.00---2.00------------------------------------------------------------------
......................................................................................................................................................................................................................................ACTACCACACCCAGCTAACCTC222.000.00--------------------------------2.00-------------------------------------
..................CACTTATATTAATCTGGATAAAGCGGT.............................................................................................................................................................................................................2712.002.00-------2.00--------------------------------------------------------------
.............................................................................................................................................CACGATCTCGGCTCACTGCT.........................................................................................202.000.001.00---------1.00-----------------------------------------------------------
.............................................................................................................................................CACGATCTCGGCTCACTGCATAAG.....................................................................................242.000.00--------------------------2.00-------------------------------------------
......................TATATTAATCTGGATAAAGCGGTTCT..........................................................................................................................................................................................................2612.002.00--------------1.00---------------1.00---------------------------------------
......................................................................................................................................................................................................................GGGATTACAGGTGCTCAAA.................192.000.00--------------2.00-------------------------------------------------------
.....................................................................................................................................................................................................TAGCCTCCTGAGTAGCTGGGATTACAG..........................2702.002.00--------1.00---1.00---------------------------------------------------------
.............................................................................................................................................CACGATCTCGGCTCACTGCATGA......................................................................................232.000.001.00--------------------------------------------------------------1.00------
................................TGGATAAAGCGGTTCTTG........................................................................................................................................................................................................1812.002.00----------------1.00--1.00--------------------------------------------------
........................TATTAATCTGGATAAAGCGGTTCT..........................................................................................................................................................................................................2412.002.00---2.00------------------------------------------------------------------
............................................................................................................................................GCACGATCTCGGCTCACTTCA.........................................................................................212.000.002.00---------------------------------------------------------------------
.............................................................................................................................................CACGATCTCGGCTCACTGCACAA......................................................................................232.000.00----2.00-----------------------------------------------------------------
.......................................................................................................................................CAATGGCACGATCTCGGAT................................................................................................191.000.001.00---------------------------------------------------------------------
............................................................................................................................................GCACGATCTCGGCTCACTGCCA........................................................................................221.000.00---------------------------------------------------1.00------------------
...................................ATAAAGCGGTTCTTGGTA.....................................................................................................................................................................................................1811.001.00------------------------1.00---------------------------------------------
................................TGGATAAAGCGGTTCTTGGTACCA..................................................................................................................................................................................................241.000.00-----------1.00----------------------------------------------------------
.....................................................................................................................................TGCAATGGCACGATCTCGGCTAAAA............................................................................................251.000.00----------------------------------------1.00-----------------------------
.............................................................................................................................................CACGATCTCGGCTCACTGCAC........................................................................................211.000.00----------------------1.00-----------------------------------------------
.................................................................................................................................................ATCTCGGCTCACTGCAACCTCTGTCCCTC............................................................................291.000.00--1.00-------------------------------------------------------------------
..................................................................................................................................................TCTCGGCTCACTGCAACCTCTGTCTCCGGCT.........................................................................311.000.00-1.00--------------------------------------------------------------------
........................TATTAATCTGGATAAAGCGGG.............................................................................................................................................................................................................211.000.00-------1.00--------------------------------------------------------------
................................TGGATAAAGCGGTTCTTGGTACC...................................................................................................................................................................................................231.000.00-------------1.00--------------------------------------------------------
........................TATTAATCTGGATAAAGCGGT.............................................................................................................................................................................................................2111.001.00-------1.00--------------------------------------------------------------
.................................................................................................TGAGATGGAGTTTTGAAA.......................................................................................................................................181.000.00-------------------------------------------------1.00--------------------
......................................................................................................................................GCAATGGCACGATCTCGGCTCTAGA...........................................................................................251.000.00---1.00------------------------------------------------------------------
...........................................................................................................................................GGCACGATCTCGGCTAAAG............................................................................................191.000.00-----------------1.00----------------------------------------------------
.........................................................................................................AGTTTTGCTCTTGTCGCCCAGGCTGGAGTGCC.................................................................................................................321.000.00-1.00--------------------------------------------------------------------
...........................TAATCTGGATAAAGCGGTTCTTGG.......................................................................................................................................................................................................2411.001.00---------------------------------1.00------------------------------------
...........................TAATCTGGATAAAGCGGTTCTTG........................................................................................................................................................................................................2311.001.00----------------1.00-----------------------------------------------------
......................TATATTAATCTGGATAAAGCGGTT............................................................................................................................................................................................................2411.001.00------------------1.00---------------------------------------------------
............................................................................................................................................GCACGATCTCGGCTCACTGCATAT......................................................................................241.000.00-----------------------------------------------1.00----------------------
................................TGGATAAAGCGGTTCTTGGT......................................................................................................................................................................................................2011.001.00---1.00------------------------------------------------------------------
............................................................................................................................................GCACGATCTCGGCTCACTGCCTA.......................................................................................231.000.00-----------1.00----------------------------------------------------------
............................................................................................................................................GCACGATCTCGGCTCACTGCCAGC......................................................................................241.000.00---------1.00------------------------------------------------------------
.....................TTATATTAATCTGGATAAAGCGGTT............................................................................................................................................................................................................2511.001.00--------------------------------------------------------1.00-------------
.........................................................................................................AGTTTTGCTCTTGTCGCCCATAT..........................................................................................................................231.000.00------------------------------1.00---------------------------------------
.............................................................................................................................................CACGATCTCGGCTCACTGCATGAA.....................................................................................241.000.001.00---------------------------------------------------------------------
............................................................................................................................................GCACGATCTCGGCTCACTGCACAAA.....................................................................................251.000.00--------------------------------------------------1.00-------------------
............................................................................................................................................GCACGATCTCGGCTCACTGCAC........................................................................................221.000.00----------1.00-----------------------------------------------------------
.........................................................................................................................................ATGGCACGATCTCGGCTCACTGCAACCCG....................................................................................291.000.00--1.00-------------------------------------------------------------------
...................................................................................................................................AGTGCAATGGCACGATCTCGGCTAT..............................................................................................251.000.00-----------1.00----------------------------------------------------------
............................................................................................................................................GCACGATCTCGGCTCACTGCC.........................................................................................211.000.00---------1.00------------------------------------------------------------
.......................................................................................................................................CAATGGCACGATCTCGGCTCACTGCACTGA.....................................................................................301.000.00-----------------------------------------------------------1.00----------
..................CACTTATATTAATCTGGATAAAGCGGC.............................................................................................................................................................................................................271.000.00-------1.00--------------------------------------------------------------
..................................................................................................................CTTGTCGCCCAGGCTGGAGTGCATGGC.............................................................................................................271.000.00-1.00--------------------------------------------------------------------
.........................................................................................................................................ATGGCACGATCTCGGCTCACTGT..........................................................................................231.000.001.00---------------------------------------------------------------------
....................................................................................................................................................................................AAGCGATTCTCCTGCCTTAGCGCCC.............................................251.000.00--1.00-------------------------------------------------------------------
..................................................................................................................................................................................................CCTTAGCCTCCTGAGTAGCTGGGATTACAG..........................3001.001.00--------1.00-------------------------------------------------------------
.............................................................................................................TTGCTCTTGTCGCCCAGGCTGGTGC....................................................................................................................251.000.00--1.00-------------------------------------------------------------------
............................................................................................................TTTGCTCTTGTCGCCCAGGGGAG.......................................................................................................................231.000.00-1.00--------------------------------------------------------------------
............................................................................................................................................GCACGATCTCGGCTCACTGCCCG.......................................................................................231.000.00--------------------------------------------------------------1.00-------
....................CTTATATTAATCTGGATA....................................................................................................................................................................................................................1811.001.00---1.00------------------------------------------------------------------
..............................TCTGGATAAAGCGGTTCTTGGTA.....................................................................................................................................................................................................2311.001.00-------------1.00--------------------------------------------------------
....................................................................................................................................................TCGGCTCACTGCAACCTCTGTCTCCGAGC.........................................................................291.000.00-1.00--------------------------------------------------------------------
.................................................................................................................................................ATCTCGGCTCACTGCAACCTCTGTCTAG.............................................................................281.000.00--1.00-------------------------------------------------------------------
..............................................................................................................TGCTCTTGTCGCCCAGGCTGGAGGAC..................................................................................................................261.000.00--1.00-------------------------------------------------------------------
..........................TTAATCTGGATAAAGCGGT.............................................................................................................................................................................................................1911.001.00---------------------------------------------------------1.00------------
..............................TCTGGATAAAGCGGTTCTTGGTAAGT..................................................................................................................................................................................................2611.001.00---1.00------------------------------------------------------------------
.........................................................................................AACTTTTTTGAGATGGAC...............................................................................................................................................181.000.00--1.00-------------------------------------------------------------------
..........................TTAATCTGGATAAAGCGGTTCTTG........................................................................................................................................................................................................2411.001.00------------------------------------------------------1.00---------------
..............................TCTGGATAAAGCGGTTCTTGATA.....................................................................................................................................................................................................231.000.00-------------1.00--------------------------------------------------------
...........................................................................................CTTTTTTGAGATGGAGTTTTGCTCTTGTAGGG...............................................................................................................................321.000.00-------------------------1.00--------------------------------------------
.....................................................................GCTGTGTATGAATTCTG....................................................................................................................................................................171.000.00-----------------------------------1.00----------------------------------
...............................................................................................................................................................................GATTCAAGCGATTCTCCTGTGAA....................................................231.000.00-----------------1.00----------------------------------------------------
..............................TCTGGATAAAGCGGTTCTTGGTAAG...................................................................................................................................................................................................2511.001.00---1.00------------------------------------------------------------------
.........................................................................................................................................ATGGCACGATCTCGGCTCACGGAC.........................................................................................241.000.00-----------------1.00----------------------------------------------------
...............................CTGGATAAAGCGGTTCTTG........................................................................................................................................................................................................1911.001.00------------------------1.00---------------------------------------------
.............................ATCTGGATAAAGCGGCG............................................................................................................................................................................................................171.000.00------------------------------------1.00---------------------------------
.....................................................................................................................................TGCAATGGCACGATCTCGGCTCAGAA...........................................................................................261.000.00-----------------------------------------------------------------1.00----
.....................................................................................................................................................CGGCTCACTGCAACCTCTGTCTCCCAGCTC.......................................................................301.000.00--1.00-------------------------------------------------------------------
................TTCACTTATATTAATCTGGATAAAGCGGT.............................................................................................................................................................................................................2911.001.00------------------1.00---------------------------------------------------
..........................TTAATCTGGATAAAGCGGTT............................................................................................................................................................................................................2011.001.00---------------------------------------------1.00------------------------
.....................................................................................................................................................CGGCTCACTGCAACCTCTGTCTCCC............................................................................2501.001.00---------------1.00------------------------------------------------------
....................CTTATATTAATCTGGATAAAGCGGTT............................................................................................................................................................................................................2611.001.00-------------------------------------1.00--------------------------------
..........................TTAATCTGGATAAAGCG...............................................................................................................................................................................................................1711.001.00-----------------------------------------------------1.00----------------
.............................................................................................................................................CACGATCTCGGCTCACTGCACC.......................................................................................221.000.00------------1.00---------------------------------------------------------
..............................................................................................................................................ACGATCTCGGCTCACTGCATTA......................................................................................221.000.00--------------------------------------1.00-------------------------------
..................................................................................................................................................TCTCGGCTCACTGCAACCTCTGTCGT..............................................................................261.000.00-1.00--------------------------------------------------------------------
....................................................................................................................................................TCGGCTCACTGCAACCTCTGT.................................................................................2101.001.001.00---------------------------------------------------------------------
............................................................................................................................AGGCTGGAGTGCAATGGCACGATCGCCG..................................................................................................281.000.00-1.00--------------------------------------------------------------------
.................................................................................................................................................................................TTCAAGCGATTCTCCTGCCTTTTA.................................................241.000.00----------------------------------------------1.00-----------------------
...................................................................................................................................AGTGCAATGGCACGATCTCGGATA...............................................................................................241.000.00------------------------------------------------1.00---------------------
.........................................................................................................................................................................................ATTCTCCTGCCTTAGCCTCCTGAGTAGCCGGA.................................321.000.00-1.00--------------------------------------------------------------------
............................................................................................................................................GCACGATCTCGGCTCACTGCTATA......................................................................................241.000.00----------1.00-----------------------------------------------------------
.........................................................................................................AGTTTTGCTCTTGTCGCCCAGGCTGGGGCG...................................................................................................................301.000.00-1.00--------------------------------------------------------------------
.......................ATATTAATCTGGATAAAGCGGT.............................................................................................................................................................................................................2211.001.00-----------------------------------------1.00----------------------------
............................................................................................................................................GCACGATCTCGGCTCACTGCACAG......................................................................................241.000.00-----------------------------1.00----------------------------------------
............................................................................................................................................GCACGATCTCGGCTCACTGCACATA.....................................................................................251.000.00-------------------------------1.00--------------------------------------
....................................................................................................................................................................................................TTAGCCTCCTGAGTAGCTGGGATTACAG..........................2801.001.00------------1.00---------------------------------------------------------
............................................................................................................................................GCACGATCTCGGCTCACTGCATTT......................................................................................241.000.00-------------------------------1.00--------------------------------------
.............................................................................................................................................CACGATCTCGGCTCACTGCATAGA.....................................................................................241.000.00------------------------------------------------------------------1.00---
.............................................................................................................................................CACGATCTCGGCTCACTGCACAAG.....................................................................................241.000.00------1.00---------------------------------------------------------------
.....................................................................................................................................TGCAATGGCACGATCTCGGCTATAA............................................................................................251.000.00-----------1.00----------------------------------------------------------
.................................................................................................................TCTTGTCGCCCAGGCTGGAGGCG..................................................................................................................231.000.00--1.00-------------------------------------------------------------------
................................TGGATAAAGCGGTTCTTGG.......................................................................................................................................................................................................1911.001.00---------------------------------------1.00------------------------------
..............................................................................................................TGCTCTTGTCGCCCAGGGCGG.......................................................................................................................211.000.00--1.00-------------------------------------------------------------------
.............................................................................................................................................CACGATCTCGGCTCACTTCA.........................................................................................201.000.00---------------------1.00------------------------------------------------
............................................................................................................................................GCACGATCTCGGCTCACTGCACAA......................................................................................241.000.00-------------------------------------------------------1.00--------------
...................................................................................................................................................CTCGGCTCACTGCAACCTCTGT.................................................................................2201.001.001.00---------------------------------------------------------------------
................................TGGATAAAGCGGTTCTTGGTAAGT..................................................................................................................................................................................................2411.001.00--------------------------------------------1.00-------------------------
.........................................................................................AACTTTTTTGAGATGGAGTTTTGCT........................................................................................................................................2530.330.33--0.33-------------------------------------------------------------------
..................................................................................TCAGGTAAACTTTTTTGA......................................................................................................................................................1840.250.25---------------------------------------------------------------------0.25

Antisense strand
CCTGCATTTAAAGGCTTTCACTTATATTAATCTGGATAAAGCGGTTCTTGGTAAGTATCCCTTTCATTAGCTGTGTATGAATTCAGGTAAACTTTTTTGAGATGGAGTTTTGCTCTTGTCGCCCAGGCTGGAGTGCAATGGCACGATCTCGGCTCACTGCAACCTCTGTCTCCCAGATTCAAGCGATTCTCCTGCCTTAGCCTCCTGAGTAGCTGGGATTACAGGTGCTCACTACCACACCCAGCTAATT
.......................................................................................................((......(((((.(((.....))).)))))(((.((((.((....)))).)).)))..))......................................................................................
.......................................................................................................104...........................................................166..................................................................................
SizePerfect hitTotal NormPerfect NormGSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR037943(GSM510481)
293DcrTN. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR189782SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR040014(GSM532899)
G623N. (cervix)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR038856(GSM458539)
D11. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		TAX577743(Rovira)
total RNA. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
.............................................................................................................................GGCTGGAGTGCAATGGCACGATGGAC................................................................................................... 264.000.00-3.001.00-------------------------------------------------------------------
...........................................................................................................................................................................................TCTCCTGCCTTAGCCTGCG............................................ 192.000.00-2.00--------------------------------------------------------------------
.............................................................................................................................GGCTGGAGTGCAATGGCACGATCTGGTG................................................................................................. 282.000.00-2.00--------------------------------------------------------------------
.............................................................................................................................GGCTGGAGTGCAATGGCACGATAGGC................................................................................................... 262.000.00-1.001.00-------------------------------------------------------------------
...............................................................................................................GCTCTTGTCGCCCAGTCTG........................................................................................................................ 192.000.00---------------------------1.00------------------------------------1.00-----
.................................................................................................................................................................ACCTCTGTCTCCCAGAGAT...................................................................... 192.000.00--------------------2.00-------------------------------------------------
........................................................................................................................................................................GCTTGAATCTGGGAGA.................................................................. 1602.002.00------2.00---------------------------------------------------------------
.......................................................................................................GGAGTTTTGCTCTTGTCGCCCAGGCTGGAGTCG.................................................................................................................. 331.000.00-1.00--------------------------------------------------------------------
........................................................................................................CTGGGCGACAAGAGCAAAACTC............................................................................................................................ 2201.001.00------1.00---------------------------------------------------------------
..........................................................................................................................................................................ATCGCTTGAATCTGGGA............................................................... 1701.001.00---------1.00------------------------------------------------------------
...........................................................................................................................CAGGCTGGAGTGCAATGGCACGATCGAC................................................................................................... 281.000.00-1.00--------------------------------------------------------------------
.............................................................................................................................GGCTGGAGTGCAATGGCACGATCTGGTC................................................................................................. 281.000.00-1.00--------------------------------------------------------------------
.............................................................................................................................GGCTGGAGTGCAATGGCACGATGGTG................................................................................................... 261.000.00-1.00--------------------------------------------------------------------
.............................................................................................................................GGCTGGAGTGCAATGGCACGATGAGC................................................................................................... 261.000.00--1.00-------------------------------------------------------------------
.............................................................................................................................................CACGATCTCGGCTCACTGCAACCTCA................................................................................... 261.000.00---------1.00------------------------------------------------------------
............................................................................................................................................................................GGAGAATCGCTTGAATCTGG.......................................................... 2001.001.00------1.00---------------------------------------------------------------
......................................................................................................................................GCAATGGCACGATCTCGGCTA............................................................................................... 211.000.00-----------1.00----------------------------------------------------------
.............................................................................................................................................CACGATCTCGGCTCACTGA.......................................................................................... 191.000.00----------1.00-----------------------------------------------------------
.....................................................................................................................................................................................................TAATCCCAGCTACTCAGGAGGCTA............................. 2401.001.00---------------1.00------------------------------------------------------
.......................................................................................................................................................................................................................................CTACCACACCCAGCTGCAT 191.000.00-------------------------------------------------------------------1.00--
...............................................................................................................................................................CAACCTCTGTCTCCCAGGG........................................................................ 191.000.00-------------------------1.00--------------------------------------------
.....................................................................................................................GTCGCCCAGGCTGGAGTGCAACTTT............................................................................................................ 251.000.00-----------------------------1.00----------------------------------------
.....................................................................................................................................................................................AGCGATTCTCCTGCCTTAAGTA............................................... 221.000.00------------------------------------------1.00---------------------------
..........................................................................................................................................................................................................................TTACAGGTGCTCACTACCACCCC......... 231.000.00--1.00-------------------------------------------------------------------
.............................................................................................................................GGCTGGAGTGCAATGGCACGATGGGT................................................................................................... 261.000.00-1.00--------------------------------------------------------------------
.......................................................................................................................................CAATGGCACGATCTCGGCAGTT............................................................................................. 221.000.00-------------------1.00--------------------------------------------------
..........................................................................................................................................................................................TTCTCCTGCCTTAGCCTCCTCTCC........................................ 241.000.00--1.00-------------------------------------------------------------------
.............................................................................................................................................CACGATCTCGGCTCACATAA......................................................................................... 201.000.00----------------1.00-----------------------------------------------------
...........................................................................................................................................................................................TCTCCTGCCTTAGCCTCCCTTA......................................... 221.000.00---1.00------------------------------------------------------------------
.............................................................................................................................GGCTGGAGTGCAATGGCACGATCTAGGC................................................................................................. 281.000.00-1.00--------------------------------------------------------------------
.......................................................................................................................CGCCCAGGCTGGAGTGCAATGGCACGTG....................................................................................................... 281.000.00-------------------------------------------1.00--------------------------
........................................................................................................................................................................................................CCTCCTGAGTAGCTGGGATTACAGGTGAT..................... 291.000.00--------1.00-------------------------------------------------------------
.......................................................................................................................................................................................................................................CTACCACACCCAGCTGGGA 191.000.00--1.00-------------------------------------------------------------------
.............................................................................................................................GGCTGGAGTGCAATGGCACGATCTGAGC................................................................................................. 281.000.00-1.00--------------------------------------------------------------------
..............................................................................................................................................................................GAGAATCGCTTGAATCT........................................................... 1701.001.00----------------------------------------------------1.00-----------------
.......................................................................................................CCTGGGCGACAAGAGCAAAACTCC........................................................................................................................... 2401.001.00---------1.00------------------------------------------------------------
...................................................................................................................TTGTCGCCCAGGCTGGAGCAG.................................................................................................................. 211.000.00---------------1.00------------------------------------------------------
.......................................................................................................GGAGTTTTGCTCTTGTCGCCCAGGCTCG....................................................................................................................... 281.000.00--1.00-------------------------------------------------------------------