ID: uc003fuh.1_intron_9_0_chr3_194349239_r.5p
GENE: TMEM44(1)
chr3:194354092-194354341-


(5)
AGO2.ip
(5)
B-CELL
(1)
BRAIN
(10)
BREAST
(28)
CELL-LINE
(15)
CERVIX
(1)
HEART
(2)
HELA
(5)
LIVER
(2)
OTHER
(38)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
GGCCGTCCGCGAGCCCAGCCGCCCGCCCCGCTCCGGCCAGGATGTTGGAGGTGGGTGACCGCGAAGAGGTCGGCGGGGGGCGGGGGCCGCAGTCTTTGTGCGCGCGCAGCTCCCGGCTCCCGCCGCTGGGGGGCGGCCTCCGCCCTGCCGACCCCCGACAATAGCGCGAGGGGTGGGGAGCGCGCGGTCCCGGAAACTTTTCCCCGGCGCCTTCGCCGCCGCCGCCCGCGCCCGGGAGCGCGCCCTTCTC
...................................................................(((((((..((((((((((((((......((((....)))).((((((((.......))))))))))))))))))))))))))))).(((((....(((((............))))).)))..)).........................................................
...............................................................64......................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM532874(GSM532874)
G699T. (cervix)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040039(GSM532924)
G531T. (cervix)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040028(GSM532913)
G026N. (cervix)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
GSM532876(GSM532876)
G547T. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040007(GSM532892)
G601T. (cervix)
TAX577739(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR189784SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
GSM532877(GSM532877)
G691N. (cervix)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191528(GSM715638)
130genomic small RNA (size selected RNA from . (breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR040040(GSM532925)
G612N. (cervix)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR040037(GSM532922)
G243T. (cervix)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
GSM532880(GSM532880)
G659T. (cervix)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040009(GSM532894)
G727T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR040031(GSM532916)
G013T. (cervix)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM532884(GSM532884)
G871T. (cervix)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
TAX577453(Rovira)
total RNA. (breast)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
TAX577579(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
....................................................................GTCGGCGGGGGGCGGGGCGG..................................................................................................................................................................20113.001.00---1.00----2.00-1.001.00-------1.00---------1.00---------1.00--1.00--------------------------------1.00---1.00------1.00-1.00----------------------
....................................................................GTCGGCGGGGGGCGGGGCGGG.................................................................................................................................................................2119.001.00-1.00-1.00-----------1.00-----1.00---1.00---1.00---1.00---1.00---------------1.00---------------------------------------------------------
....................................................................GTCGGCGGGGGGCGGGGCG...................................................................................................................................................................1916.001.001.00------1.00------1.00-1.00------1.00----------------1.00----------------------------------------------------------------------
....................................................................GTCGGCGGGGGGCGGGGG....................................................................................................................................................................1816.006.00--1.00--1.00-3.00------------1.00------------------------------------------------------------------------------------------
...................................................................GGTCGGCGGGGGGCGGGGCG...................................................................................................................................................................2015.002.001.00-----2.00--1.00-----------------------------------------1.00-----------------------------------------------------------
......................................................................CGGCGGGGGGCGGGG.....................................................................................................................................................................1504.004.00--1.00------1.00--1.00-1.00------------------------------------------------------------------------------------------------
....................................................................GTCGGCGGGGGGCGGGGC....................................................................................................................................................................1814.001.001.00-------------------------------------------------1.00--------------1.00---1.00-----------------------------------------
.....................................................................TCGGCGGGGGGCGGGGCG...................................................................................................................................................................1853.200.201.60----1.20----------0.20-------------------------------------------------------------------------------------0.20--------
.........................................ATGTTGGAGGTGGGTGACCGC............................................................................................................................................................................................2113.003.00-------------3.00-------------------------------------------------------------------------------------------------
...................................................................GGTCGGCGGGGGGCGGGGCGG..................................................................................................................................................................2113.002.00--1.00--1.00----1.00----------------------------------------------------------------------------------------------------
....................................................................GTCGGCGGGGGGCGGGGGG...................................................................................................................................................................1913.006.001.00-1.00-----------1.00------------------------------------------------------------------------------------------------
...................................................................GGTCGGCGGGGGGCGGG......................................................................................................................................................................1713.003.00-----1.00--------------1.00----------------------------------------------------------------1.00-------------------------
.....................................................................TCGGCGGGGGGCGGGGCGG..................................................................................................................................................................1952.400.202.20------------------------------------------------------------------------------------------------------0.20-------
...............................TCCGGCCAGGATGTTGGAGG.......................................................................................................................................................................................................2012.002.00----------------------------2.00----------------------------------------------------------------------------------
.............................................................................................................................................................................TGGGGAGCGCGCGGTCCCGGA........................................................2112.002.00-------------------------------2.00-------------------------------------------------------------------------------
............................................................................................................................................................................................................................GCCGCCCGCGCCCGGGAG............1812.002.00--------------------------2.00------------------------------------------------------------------------------------
...................................................................GGTCGGCGGGGGGCGGGG.....................................................................................................................................................................1812.002.00--------1.00---1.00--------------------------------------------------------------------------------------------------
....................................................................GTCGGCGGGGGGCGGG......................................................................................................................................................................1622.002.00---------------0.50----------------------------------------0.50---------------------------------0.50-0.50------------------
..................................................................................................................................................................AGCGCGAGGGGTGGGGAG......................................................................1812.002.00-----------1.00---------------------------------------------------1.00-----------------------------------------------
....................................................................GTCGGCGGGGGGCGGGGGGGG.................................................................................................................................................................2112.006.00---1.00----1.00------------------------------------------------------------------------------------------------------
...................................................................GGTCGGCGGGGGGCGGGGC....................................................................................................................................................................1912.002.00-------------------1.00---------------------------------------------------1.00---------------------------------------
...................................................................GGTCGGCGGGGGGCGGGGG....................................................................................................................................................................1912.002.00------1.00------------------------------------------------------------1.00-------------------------------------------
........................................GATGTTGGAGGTGGGTGAC...............................................................................................................................................................................................1912.002.00------------------2.00--------------------------------------------------------------------------------------------
...................................................................GGTCGGCGGGGGGCGGGGGGGG.................................................................................................................................................................2212.002.00------------------------------------------------1.00-----------1.00--------------------------------------------------
...................................................................GGTCGGCGGGGGGCGGGGCGGG.................................................................................................................................................................2212.002.00-------------------------------------------------1.00--------------------1.00----------------------------------------
.........................................................................................................................................................................................................................GCCGCCGCCCGCGCCCGGCCGC...........221.000.00----1.00----------------------------------------------------------------------------------------------------------
.........................................................................CGGGGGGCGGGGGCCG.................................................................................................................................................................1601.001.00--1.00------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................CGCCCGGGAGCGCGCGCG....181.000.00--------------------------------1.00------------------------------------------------------------------------------
..........................................................................GGGGGGCGGGGGCCGCGGA.............................................................................................................................................................191.000.00-------------------------------------------------------1.00-------------------------------------------------------
.......................................GGATGTTGGAGGTGGGTGAC...............................................................................................................................................................................................2011.001.00-----------------------------------------------1.00---------------------------------------------------------------
.....................................................................................................................................................................................................................................GCCCGGGAGCGCGCCTG....171.000.00----1.00----------------------------------------------------------------------------------------------------------
......................................................................CGGCGGGGGGCGGGGG....................................................................................................................................................................1601.001.00------------1.00--------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................TCCCCGGCGCCTTCGCCA................................181.000.00------------------------1.00--------------------------------------------------------------------------------------
............................................................................................................................................................................................CCCGGAAACTTTTCCCCG............................................1811.001.00---------------------1.00-----------------------------------------------------------------------------------------
......................................................................CGGCGGGGGGCGGGGGCGGGA...............................................................................................................................................................211.000.00-----------------1.00---------------------------------------------------------------------------------------------
.......................................................................GGCGGGGGGCGGGGGCCTGCG..............................................................................................................................................................211.000.00---1.00-----------------------------------------------------------------------------------------------------------
...................................................................GGTCGGCGGGGGGCGGGGGGG..................................................................................................................................................................2111.002.00-----------1.00---------------------------------------------------------------------------------------------------
..................................................GTGGGTGACCGCGAAGAGGTCGGCG...............................................................................................................................................................................2511.001.00-----------------------------------------------------------1.00---------------------------------------------------
..............................................................GAAGAGGTCGGCGGGGGTCCT.......................................................................................................................................................................211.000.00----------------------------------1.00----------------------------------------------------------------------------
...................................GCCAGGATGTTGGAGGTGGG...................................................................................................................................................................................................2011.001.00------------------------------------------------------------------------1.00--------------------------------------
.....................................................................TCGGCGGGGGGCGGGTTAG..................................................................................................................................................................191.000.00---------------------------------------------------------------------------------------1.00-----------------------
...................................................................GGTCGGCGGGGGGCGGGGGGGGG................................................................................................................................................................2311.002.00--------------------------------------------------------------------1.00------------------------------------------
...........................................GTTGGAGGTGGGTGACGG.............................................................................................................................................................................................181.000.00----------1.00----------------------------------------------------------------------------------------------------
....................................................................GTCGGCGGGGGGCGGGGCGA..................................................................................................................................................................2011.001.00-----------------------------------1.00---------------------------------------------------------------------------
.....................................................GGTGACCGCGAAGAGGCT...................................................................................................................................................................................181.000.00---------------------------------------------------------1.00-----------------------------------------------------
......................................................................CGGCGGGGGGCGGGGGCGT.................................................................................................................................................................191.000.00-----------------1.00---------------------------------------------------------------------------------------------
.........................................................................CGGGGGGCGGGGGCCTA................................................................................................................................................................171.000.00--------------------------------------------------------------------------1.00------------------------------------
...................................................................................................................................................................................................................................GCGCCCGGGAGCGCGCCCT....1911.001.00--------------------------------------------------------------1.00------------------------------------------------
....................................................................GTCGGCGGGGGGCGGGGGGG..................................................................................................................................................................2011.006.00----1.00----------------------------------------------------------------------------------------------------------
........................................................................................................................CGCCGCTGGGGGGCGGGC................................................................................................................181.000.00----1.00----------------------------------------------------------------------------------------------------------
...................................................................GGTCGGCGGGGGGCGGGGGG...................................................................................................................................................................2011.002.00------1.00--------------------------------------------------------------------------------------------------------
....................................................................GTCGGCGGGGGGCGGGG.....................................................................................................................................................................1711.001.00---------------1.00-----------------------------------------------------------------------------------------------
....................................................................GTCGGCGGGGGGCGGGGGT...................................................................................................................................................................1911.006.001.00--------------------------------------------------------------------------------------------------------------
..................................................................AGGTCGGCGGGGGGCGGGGCG...................................................................................................................................................................211.000.00--1.00------------------------------------------------------------------------------------------------------------
......................................AGGATGTTGGAGGTGGGTGAC...............................................................................................................................................................................................2111.001.00-------------------------------------------------------------1.00-------------------------------------------------
.....................................................................TCGGCGGGGGGCGGGGC....................................................................................................................................................................1750.600.200.20---------0.20---------------------------------------------------------------------------------------------0.20------
.....................................................................TCGGCGGGGGGCGGGGG....................................................................................................................................................................1750.600.600.40------------------------------------------------------------------------------------------------0.20-------------
..................................................................................................................................................................................................................CTTCGCCGCCGCCGCCC.......................1720.500.50--------------------------------0.50------------------------------------------------------------------------------
.....TCCGCGAGCCCAGCCGCC...................................................................................................................................................................................................................................1820.500.50---------------------------------------------------------------------------------------------0.50-----------------
...................................................................GGTCGGCGGGGGGCGGCG.....................................................................................................................................................................1820.500.50----------------------------------------------------------------------------------------------0.50----------------
...................................................................GGTCGGCGGGGGGCGG.......................................................................................................................................................................1620.500.50---------0.50-----------------------------------------------------------------------------------------------------
....................................................................GTCGGCGGGGGGCGGGCGC...................................................................................................................................................................1920.502.00--------------------------------------------------------0.50------------------------------------------------------
...................................................................GGTCGGCGGGGGGCGGCGG....................................................................................................................................................................1920.500.500.50--------------------------------------------------------------------------------------------------------------
.....................................................................TCGGCGGGGGGCGGGGCGGG.................................................................................................................................................................2050.400.20------------------------------------0.20---------------------------------------------------------------------0.20----
................................................................................................................................GGGGGCGGCCTCCGCC..........................................................................................................1630.330.33----------------------------------0.33----------------------------------------------------------------------------
.....................................CAGGATGTTGGAGGTGG....................................................................................................................................................................................................1730.330.33---------------------------------------------------------------------------------------------------0.33-----------
.............CCCAGCCGCCCGCCCCG............................................................................................................................................................................................................................1730.330.33--------------------------------------------------------------------------------------------------0.33------------
......................................AGGATGTTGGAGGTGG....................................................................................................................................................................................................1670.290.29-------------------------------------------------------------------------------------------0.14-----------------0.14-
....................................................................GTCGGCGGGGGGCGG.......................................................................................................................................................................1540.250.25---------------------------------0.25-----------------------------------------------------------------------------
....................................................................GTCGGCGGGGGGCGGCG.....................................................................................................................................................................1740.250.25---------0.25-----------------------------------------------------------------------------------------------------
.................................CGGCCAGGATGTTGG..........................................................................................................................................................................................................1540.250.25----------------------------------------------------------------------------------------------------0.25----------
......................................AGGATGTTGGAGGTGGG...................................................................................................................................................................................................1750.200.20-----------------------------------------------------------------------------------------------------0.20---------
.....................................................................TCGGCGGGGGGCGGGG.....................................................................................................................................................................1650.200.20-------------------------------------------------------------------------------------------------0.20-------------
.....................................................................TCGGCGGGGGGCGGGGCCGT.................................................................................................................................................................2050.200.20---------------------------------------------------------------------------------------------------------0.20-----
.....................................................................TCGGCGGGGGGCGGGGCGGA.................................................................................................................................................................2050.200.20-----------------------------------0.20---------------------------------------------------------------------------
.....................................................................TCGGCGGGGGGCGGGGT....................................................................................................................................................................1750.200.200.20--------------------------------------------------------------------------------------------------------------
.....................................................................TCGGCGGGGGGCGGGGTG...................................................................................................................................................................1850.200.200.20--------------------------------------------------------------------------------------------------------------
.....................................................................TCGGCGGGGGGCGGGGGA...................................................................................................................................................................1850.200.60-----------------0.20---------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................CGCCGCCCGCGCCCGGG..............1770.140.14---0.14-----------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................CCCGCGCCCGGGAGC...........1580.120.12--------------------------------------------------------------------------------------------------------------0.12

Antisense strand
GGCCGTCCGCGAGCCCAGCCGCCCGCCCCGCTCCGGCCAGGATGTTGGAGGTGGGTGACCGCGAAGAGGTCGGCGGGGGGCGGGGGCCGCAGTCTTTGTGCGCGCGCAGCTCCCGGCTCCCGCCGCTGGGGGGCGGCCTCCGCCCTGCCGACCCCCGACAATAGCGCGAGGGGTGGGGAGCGCGCGGTCCCGGAAACTTTTCCCCGGCGCCTTCGCCGCCGCCGCCCGCGCCCGGGAGCGCGCCCTTCTC
...................................................................(((((((..((((((((((((((......((((....)))).((((((((.......))))))))))))))))))))))))))))).(((((....(((((............))))).)))..)).........................................................
...............................................................64......................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM532874(GSM532874)
G699T. (cervix)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040039(GSM532924)
G531T. (cervix)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040028(GSM532913)
G026N. (cervix)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
GSM532876(GSM532876)
G547T. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040007(GSM532892)
G601T. (cervix)
TAX577739(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR189784SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
GSM532877(GSM532877)
G691N. (cervix)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191528(GSM715638)
130genomic small RNA (size selected RNA from . (breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR040040(GSM532925)
G612N. (cervix)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR040037(GSM532922)
G243T. (cervix)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
GSM532880(GSM532880)
G659T. (cervix)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040009(GSM532894)
G727T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR040031(GSM532916)
G013T. (cervix)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM532884(GSM532884)
G871T. (cervix)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
TAX577453(Rovira)
total RNA. (breast)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
TAX577579(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
...................................................................................................................................................................................................................TTCGCCGCCGCCGCCTCTG.................... 195.000.001.00-------------------------------------------1.00-------------------------------1.00-1.00-----1.00--------------------------
.........................................................................................................................................................................................................................GGGCGCGGGCGGCGGC................. 1603.003.00----------------------2.00-----------------------------------1.00----------------------------------------------------
...................................................................................................................................................................GCGCGAGGGGTGGGGAGGC.................................................................... 193.000.00-3.00-------------------------------------------------------------------------------------------------------------
............GCCCAGCCGCCCGCCGGGG........................................................................................................................................................................................................................... 192.000.00----------------------------------------------------1.00-----------------------------1.00----------------------------
...GCGGCTGGGCTCGCGGACG.................................................................................................................................................................................................................................... 1912.002.00---------------------------2.00-----------------------------------------------------------------------------------
.....................................................................................................................................................................GCGAGGGGTGGGGAGTCTC.................................................................. 191.000.00-1.00-------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................CGCCGCCGCCCGCGCCT................. 171.000.00---------------------------------------------------------------------------------1.00-----------------------------
..GCGGCTGGGCTCGCGGACGG.................................................................................................................................................................................................................................... 2011.001.00-----------------------------------------1.00---------------------------------------------------------------------
...................................................................GGTCGGCGGGGGGCGGGGC.................................................................................................................................................................... 1921.000.00----1.00----------------------------------------------------------------------------------------------------------
...................................................................................................................................................................GCGCGAGGGGTGGGGAGGCCG.................................................................. 211.000.00----------------------------------------------------------------1.00----------------------------------------------
............GCCCAGCCGCCCGCCCCGA........................................................................................................................................................................................................................... 191.000.00-----------------------------------------------------------------------------1.00---------------------------------
.....................................................................TCGGCGGGGGGCGGGGGCTC................................................................................................................................................................. 201.000.00------------------------1.00--------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TTCGCCGCCGCCGCCTCCG.................... 191.000.00------------------------------------1.00--------------------------------------------------------------------------
..................................................................................................................................................................AGCGCGAGGGGTGGGGAGCT.................................................................... 2011.000.00-------------------------------------------1.00-------------------------------------------------------------------
.................................................................................................................................................................................................................CCTTCGCCGCCGCCGGAC....................... 181.000.00-----------------------------------------------------------------------------------1.00---------------------------
..................................................................................................................................................................AGCGCGAGGGGTGGGGAGCCTC.................................................................. 2211.000.00-------------------------1.00-------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TTCGCCGCCGCCGCCCTC..................... 181.000.00---------------------------------------------1.00-----------------------------------------------------------------
............CGGGGCGGGCGGCTGGGC............................................................................................................................................................................................................................ 1811.001.00-----------------------------------------------------------------------------------------1.00---------------------
...............................................................................................................................................................................................................CGCCTTCGCCGCCGCCGGGA....................... 201.000.00--1.00------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................CGCGCCCGGGAGCGCGTGTG.... 201.000.00----------------1.00----------------------------------------------------------------------------------------------
............GCCCAGCCGCCCGCCA.............................................................................................................................................................................................................................. 161.000.00---1.00-----------------------------------------------------------------------------------------------------------
...................................................................................................................................................................GCGCGAGGGGTGGGGAGG..................................................................... 181.000.00-1.00-------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................CGCCTTCGCCGCCGCCGCGGA...................... 211.000.00--1.00------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................AGCGCGAGGGGTGGGGCA...................................................................... 181.000.00--------------------------------------1.00------------------------------------------------------------------------
..................................................................................................................................................................AGCGCGAGGGGTGGGGAGCC.................................................................... 2011.000.00-1.00-------------------------------------------------------------------------------------------------------------
......................................................................................................................CCCGCCGCTGGGGGGCGGG................................................................................................................. 191.000.00-----------------------1.00---------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................GCGGGCGGCGGCGGCG..................... 1601.001.00--1.00------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................CCTTCGCCGCCGCCGCCTGTG.................... 211.000.00---------1.00-----------------------------------------------------------------------------------------------------
............GCCCAGCCGCCCGCCGCCC........................................................................................................................................................................................................................... 191.000.00------------------------------1.00--------------------------------------------------------------------------------
...................................................................................................................................................................................................................TTCGCCGCCGCCGCCTAT..................... 181.000.00------------------------------1.00--------------------------------------------------------------------------------
..............CCAGCCGCCCGCCCCGCAA......................................................................................................................................................................................................................... 191.000.00----------------------------------------------1.00----------------------------------------------------------------
...................................................................................................................................................................CTCCCCACCCCTCGCGC...................................................................... 1711.001.00-1.00-------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................GCGCGAGGGGTGGGGAGGCC................................................................... 201.000.00-1.00-------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................TCGCCGCCGCCGCCCTTTT................... 191.000.00------------------------------------------------------------------1.00--------------------------------------------
............GCCCAGCCGCCCGCCCCGAA.......................................................................................................................................................................................................................... 201.000.00------------------------------------------------------1.00--------------------------------------------------------
.......................................................................................................GCGCAGCTCCCGGCTCAGG................................................................................................................................ 191.000.00-------------------------------------------------------------------------1.00-------------------------------------
.................................................................................................................CGGCTCCCGCCGCTGTGGT...................................................................................................................... 191.000.00--------------------------------------------------------------------------------1.00------------------------------
.............................................................................................................................................................................................................................CTCCCGGGCGCGGGCGG............ 1730.670.67------------------------------------------------------------------------------------------0.33-----0.33--------------
.......................................................................................................................CGCCCCCCAGCGGCGG................................................................................................................... 1620.500.50-------------------------------------------------------------------------------------------0.50-------------------
....................................................................................................................................................................TCCCCACCCCTCGCG....................................................................... 1520.500.50-----------------------------------------------------------------------------------------------0.50---------------
....GGCTGGGCTCGCGGAC...................................................................................................................................................................................................................................... 1630.330.33----------0.33----------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................TCCCGGGCGCGGGCGG............. 1660.330.33---------------------------------0.17--------------------------------------------------------------------------0.17--
.....GGCTGGGCTCGCGGA...................................................................................................................................................................................................................................... 1530.330.33--------------------------------0.33------------------------------------------------------------------------------
...................................................................................................................................................................CCCCACCCCTCGCGC........................................................................ 1570.290.29-------------------------------------0.14----------------------------------------------------------0.14--------------
.........................................................................................................................................................................GCGCGCTCCCCACCCC................................................................. 1660.170.17-----------------------------------------------------------------------------------------------------------0.17---
...................................................................................................................................................................GCGCGAGGGGTGGGGACC..................................................................... 180.140.00--------------------------------------0.14------------------------------------------------------------------------