ID: uc003fsv.2_intron_7_0_chr3_191098521_f
GENE: (8)
chr3:191098471-191098666+


(1)
AGO2.ip 		(5)
B-CELL 		(2)
BRAIN 		(4)
BREAST 		(12)
CELL-LINE 		(1)
CERVIX 		(1)
FIBROBLAST 		(3)
HEART 		(2)
HELA 		(1)
KIDNEY 		(5)
LIVER 		(1)
OTHER 		(22)
SKIN 		(1)
UTERUS 		(2)
XRN.ip

Sense strand
CATAGGCTACCCAGGTGGACATGAGAGCCGCTCAAGTAGCTCAAGATGAAGTAAGTTAATGAGTTTAGCTGATATTCTTTGGAAATATCCTAGTATATTTCTATCTGCACCTCTGCAGTTAATGATATTGACTGTATTTTGTTTAGGAAATCGCTCGACTTCTAATGGCTGAAGAAAAGAAAGCTTACAAAAAAGC
.....................................................((((((((...(((((((........(((((((((......)))))))))............)))))))...))))))))...............................................................
..................................................51.............................................................................................146................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR191466(GSM715576)
114genomic small RNA (size selected RNA from . (breast)		SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR038857(GSM458540)
D20. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
...........................................................................................................................GATATTGACTGTATTTTGTTTAG..................................................23148.0048.0018.006.002.001.00--4.002.001.00-1.00----1.00-1.00-1.00--2.00-1.00--------1.001.00--1.00-1.00---1.00-1.00----1.00------------
..........................................................................................................................TGATATTGACTGTATTTTGTTTAG..................................................24127.0027.006.001.002.00-3.00--2.00-2.001.001.00--1.00-1.00-------1.002.00----------1.00-1.00---------1.00---------1.00----
...........................................................................................................................GATATTGACTGTATTTTGTTTAGA.................................................24114.0048.0010.00-------1.00----3.00-------------------------------------------------
.........................................................................................................................ATGATATTGACTGTATTTTGTTTAG..................................................2518.008.00-4.00---1.00---1.00---------------------1.00------------------------1.00------
..........................................................................................................................TGATATTGACTGTATTTTGTTTAGA.................................................2515.0027.003.00--1.00-----------1.00-----------------------------------------------
...........................................................................................................................GATATTGACTGTATTTTGTTTAGC.................................................2413.0048.003.00--------------------------------------------------------------
........................................................................................................................AATGATATTGACTGTATTTTGTTTAG..................................................2613.003.001.00----------1.00-------1.00-------------------------------------------
..........................................................................................................................TGATATTGACTGTATTTTGTTTAGAA................................................2612.0027.001.00--------------------------------------------------1.00-----------
...................................................................................................................................................................AATGGCTGAAGAAAAGAA...............1812.002.00------------1.00------------------------------------------1.00-------
.......................................................................................................................TAATGATATTGACTGTATTTTGTTTAG..................................................2712.002.00--------1.00--------------------------------------1.00---------------
................................................................................................................................................................TCTAATGGCTGAAGAAAA..................1812.002.00------------2.00--------------------------------------------------
....................................................................................................................................................................ATGGCTGAAGAAAAGAAAG.............1912.002.00---------------------1.00-----------------------------------1.00-----
...............................................................................................................................................................TTCTAATGGCTGAAGAAAAGAAA..............2312.002.00-----2.00---------------------------------------------------------
...................................................................................................................................................................AATGGCTGAAGAAAAGAAAG.............2012.002.00------------------------------------------1.00----------1.00---------
..............................CTCAAGTAGCTCAAGATGAAGA................................................................................................................................................222.000.00--------------------------------------------1.00-1.00----------------
..........................GCCGCTCAAGTAGCTCAAGATGAA..................................................................................................................................................2412.002.00--------------------2.00------------------------------------------
....................................................................................................................AGTTAATGATATTGACTGTATTTTGTTTAGA.................................................312.000.00--------------1.00---------------------------------------------1.00--
...............TGGACATGAGAGCCGCTCAAGTAGCT...........................................................................................................................................................2612.002.00---2.00-----------------------------------------------------------
............................................................................................................................................................GACTTCTAATGGCTGAAGAAAAGA................2412.002.00------------------2.00--------------------------------------------
..................................AGTAGCTCAAGATGAAGAAA..............................................................................................................................................201.000.00----------------------------1.00----------------------------------
..........................................................................................................................TGATATTGACTGTATTTTGTTTAGGA................................................2611.001.001.00--------------------------------------------------------------
...................................................................................................................................................................AATGGCTGAAGAAAAGAAAGCTTA.........2411.001.00-----------------------1.00---------------------------------------
...........................................AGATGAAGTAAGTTAT.........................................................................................................................................161.000.00-----------------------------------------1.00---------------------
...................................................................................................................................................................AATGGCTGAAGAAAAGAAAGC............2111.001.00----------------------------------------------------1.00----------
................................................................................................ATTTCTATCTGCACCTTCC.................................................................................191.000.00--------------------------1.00------------------------------------
................................CAAGTAGCTCAAGATGAA..................................................................................................................................................1811.001.00---------------------1.00-----------------------------------------
......................................................................................................................................................TCGCTCGACTTCTAATGGCTGAAGAAAAG.................2911.001.00------------------------------1.00--------------------------------
...............TGGACATGAGAGCCG......................................................................................................................................................................1511.001.00-----------------------------------------------------------1.00---
.....GCTACCCAGGTGGACATGAGA..........................................................................................................................................................................2111.001.00---------------------------1.00-----------------------------------
...................................................................................................................................................................AATGGCTGAAGAAAAGAAAGCTT..........2311.001.00-------------------------------------------------------------1.00-
....GGCTACCCAGGTGGACATGAGAGCCG......................................................................................................................................................................2611.001.00-------------------------------------------------1.00-------------
...........................................................................................................................GATATTGACTGTATTTTGTTTAGAA................................................2511.0048.00-----------------1.00---------------------------------------------
..................................................................................................................................................................TAATGGCTGAAGAAAAGAAA..............2011.001.00----------------1.00----------------------------------------------
...................CATGAGAGCCGCTCAAGTAGCTCAAGATG....................................................................................................................................................2911.001.00------------------------------------------------------1.00--------
...............TGGACATGAGAGCCGCTCAAGTAGCTC..........................................................................................................................................................2711.001.00-----------1.00---------------------------------------------------
.......................................................................................................................................................CGCTCGACTTCTAATGGCTGAAGAAAAGA................2911.001.00----1.00----------------------------------------------------------
..........................................................................................................................TGATATTGACTGTATTTTGTTTAT..................................................241.000.001.00--------------------------------------------------------------
...........................................................................................................................GATATTGACTGTATTTTGTTTAGG.................................................2411.001.001.00--------------------------------------------------------------
........................................................................................................................AATGATATTGACTGTATTTTGTTTAGA.................................................2711.003.00----------1.00----------------------------------------------------
..........................................................................................................................TGATATTGACTGTATTTTGTTTAGT.................................................2511.0027.001.00--------------------------------------------------------------
......................................................................................................................................................................GGCTGAAGAAAAGAAAGCTTAC........2211.001.00-----------------------------1.00---------------------------------
......................................................................................................................................................TCGCTCGACTTCTAATGGC...........................1911.001.00-----------------------1.00---------------------------------------
..................................................................................................................................................................TAATGGCTGAAGAAAAGAAAGC............2211.001.00-----1.00---------------------------------------------------------
..................................................GTAAGTTAATGAGTTTAGCT..............................................................................................................................2011.001.00----------------------------------------1.00----------------------
..................................AGTAGCTCAAGATGA...................................................................................................................................................1540.250.25--------------------------------------------------------------0.25

Antisense strand
CATAGGCTACCCAGGTGGACATGAGAGCCGCTCAAGTAGCTCAAGATGAAGTAAGTTAATGAGTTTAGCTGATATTCTTTGGAAATATCCTAGTATATTTCTATCTGCACCTCTGCAGTTAATGATATTGACTGTATTTTGTTTAGGAAATCGCTCGACTTCTAATGGCTGAAGAAAAGAAAGCTTACAAAAAAGC
.....................................................((((((((...(((((((........(((((((((......)))))))))............)))))))...))))))))...............................................................
..................................................51.............................................................................................146................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR191466(GSM715576)
114genomic small RNA (size selected RNA from . (breast)		SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR038857(GSM458540)
D20. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
...................................................................................................................................................AAATCGCTCGACTTCTATG.............................. 191.000.00--------------------------------1.00------------------------------
.................................................................................................................................GACTGTATTTTGTTTCG.................................................. 171.000.00-----------------------------------1.00---------------------------