ID: uc003fih.2_intron_1_0_chr3_172470263_f.5p
GENE: ECT2(2)
chr3:172470213-172470462+


(1)
AGO2.ip
(10)
CELL-LINE
(1)
CERVIX
(1)
HEART
(3)
HELA
(1)
OTHER
(3)
SKIN

Sense strand
CGGCCTTTCAAATGGTATTTTTGATTTTCCTCTTCCAGTCCTTAAAGCAGGTTAGCTCATCTCCTGACTTTTTTTTTTTTTTAAACATTCTTTTAAGGGGACTTTGAATGAAAGCCACTTTAATGCCTTTTCATTGGAAATGGTTGAGTGTAGAAGACTTAAAATAATAGGGCTGGATAGAATTTATCATTGATTCTAAATTAAGGCTGTTACAACTATTGGACCGCTCCTTTGGAGAGCCTTAGAATAA
.............................................................(((((...((((...(((((((..(((((....(((....))).))))).....(((((....(((.((((....)))).))).))))))))))))...))))...))))).....(((((((.......)))))))....................................................
.............................................................62........................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR037936(GSM510474)
293cand1. (cell line)
GSM532871(GSM532871)
G652N. (cervix)
DRR001484(DRX001038)
"Hela long nuclear cell fraction, control". (hela)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..................................................................ACTTTTTTTTTTTTTTAAACTAG.................................................................................................................................................................2339.000.0017.0012.006.004.00----------------
............................................................................................TTAAGGGGACTTTGAATGAAAGCCACTTTAATGCCTTTTCATTGGAAATGGTTGAGTGTAGAAGACTTAAAATAATAGG...............................................................................7917.007.00----7.00---------------
..................................................................ACTTTTTTTTTTTTTTAAACATG.................................................................................................................................................................2323.501.000.501.501.000.50----------------
..................................................................ACTTTTTTTTTTTTTTAAACCG..................................................................................................................................................................223.000.00-3.00------------------
..................................................................ACTTTTTTTTTTTTTTAAACATAG................................................................................................................................................................2422.501.00-0.500.501.50----------------
................................................................TGACTTTTTTTTTTTTTTAAATAG..................................................................................................................................................................242.000.001.001.00------------------
..................................................................ACTTTTTTTTTTTTTTAAACATTCTTTTAAG.........................................................................................................................................................3112.002.002.00-------------------
..................................................................ACTTTTTTTTTTTTTTAAACCGG.................................................................................................................................................................232.000.001.001.00------------------
..................................................................ACTTTTTTTTTTTTTTAAACATTGTT..............................................................................................................................................................261.000.00-1.00------------------
...........................................................................................................................................................................GCTGGATAGAATTTATCATTGA.........................................................2211.001.00------1.00-------------
..................................................................ACTTTTTTTTTTTTTTAAACAT..................................................................................................................................................................2221.001.000.500.50------------------
.................TTTTTGATTTTCCTCCCT.......................................................................................................................................................................................................................181.000.00----------1.00---------
...................................................................CTTTTTTTTTTTTTTAAACATTTAAG.............................................................................................................................................................261.000.00--1.00-----------------
....................................................................TTTTTTTTTTTTTTAAACATTCAG..............................................................................................................................................................241.000.00---1.00----------------
.............................................................................................................................................GGTTGAGTGTAGAAGACTT..........................................................................................1911.001.00-------------1.00------
..............................................................................................AAGGGGACTTTGAATGAAAGCCACT...................................................................................................................................2511.001.00-----------1.00--------
..................................................................ACTTTTTTTTTTTTTTAAACTTG.................................................................................................................................................................231.000.00---1.00----------------
......................................................................TTTTTTTTTTTTAAACATTCTCGG............................................................................................................................................................241.000.001.00-------------------
..................................................................ACTTTTTTTTTTTTTTAAACTCAG................................................................................................................................................................241.000.00--1.00-----------------
..................................................................ACTTTTTTTTTTTTTTAAACATTCTTTCAAG.........................................................................................................................................................311.000.00---------------1.00----
................................................................................................................................................................................................................GTTACAACTATTGGACCGC.......................1911.001.00--------1.00-----------
.....................................................................TTTTTTTTTTTTTAAACATTCTTTTAAGGGG......................................................................................................................................................3111.001.00------------1.00-------
...........................................................................................................................................................................................................................TGGACCGCTCCTTTGGAGAGCC.........2211.001.00---------1.00----------
.......................................................................................................................................................................................................................................TTGGAGAGCCTTAGACTG.181.000.00--------------1.00-----
..................................................................ACTTTTTTTTTTTTTTAAACATTT................................................................................................................................................................241.000.00-------1.00------------
.....................................................................................................................................................................................................................AACTATTGGACCGCTCCT...................1811.001.00-----1.00--------------
..................................................................ACTTTTTTTTTTTTTTAAACATA.................................................................................................................................................................2320.501.00-----------------0.50--
.............................................................................................................................................GGTTGAGTGTAGAAG..............................................................................................1560.500.50----------------0.50---
......................................................................................................................................................................................................................................TTTGGAGAGCCTTAG.....1550.200.20------------------0.20-

Antisense strand
CGGCCTTTCAAATGGTATTTTTGATTTTCCTCTTCCAGTCCTTAAAGCAGGTTAGCTCATCTCCTGACTTTTTTTTTTTTTTAAACATTCTTTTAAGGGGACTTTGAATGAAAGCCACTTTAATGCCTTTTCATTGGAAATGGTTGAGTGTAGAAGACTTAAAATAATAGGGCTGGATAGAATTTATCATTGATTCTAAATTAAGGCTGTTACAACTATTGGACCGCTCCTTTGGAGAGCCTTAGAATAA
.............................................................(((((...((((...(((((((..(((((....(((....))).))))).....(((((....(((.((((....)))).))).))))))))))))...))))...))))).....(((((((.......)))))))....................................................
.............................................................62........................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR037936(GSM510474)
293cand1. (cell line)
GSM532871(GSM532871)
G652N. (cervix)
DRR001484(DRX001038)
"Hela long nuclear cell fraction, control". (hela)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
......................CTGGAAGAGGAAAATC.................................................................................................................................................................................................................... 1670.140.14-------------------0.14