ID: uc003fgg.2_intron_1_0_chr3_169693505_f.5p
GENE: (2)
chr3:169693455-169693704+


(1)
AGO2.ip
(1)
BRAIN
(1)
BREAST
(10)
CELL-LINE
(5)
HEART
(1)
HELA
(1)
LIVER
(1)
OTHER
(37)
SKIN
(1)
TESTES

Sense strand
TCCAACAAAGTCCACCAATATGATGGGTCACCGGGTTGATTATTTTATTGGTAGGATTATATCAGTAAAATCGTATTAGTGTACATATGTTATGAAGTTAACCTACATTTGGGATATGTAGAAGTTTTAAAAGTGCTTTCCAAATGTGATTGTTCTGGTGATGGACATATGGCAGTTGATTATTCTGTTCTTTTCTTTTATGATTGAAAATGTCTATAATAAAAAGATAACATGTTTTCTAATAACAATT
..................................................(((((.(((.....((((....((((....)))).....)))).....))))))))................................................................................................................................................
..................................................51............................................................................129.......................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR343336SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR343337SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
..................................................GTAGGATTATATCAGTA.......................................................................................................................................................................................17175.0075.008.004.005.004.003.004.004.003.003.002.001.002.00-1.001.00-2.002.001.002.002.00-2.00----1.001.001.001.001.001.00-1.00-------1.001.00-1.001.001.001.00-1.001.001.001.001.00---1.00--
........................................TATTTTATTGGTAGGATTATATCAGTA.......................................................................................................................................................................................2713.003.00-1.00--------2.00--------------------------------------------------
.............................................TATTGGTAGGATTATATCAGTA.......................................................................................................................................................................................2212.002.00-------------1.00----------------------1.00------------------------
............................CACCGGGTTGATTATTTTATTGGTAGGATTAT..............................................................................................................................................................................................3212.002.00----1.00-------------1.00------------------------------------------
............................................................................................................TTGGGATATGTAGAAAA.............................................................................................................................172.000.00------------2.00------------------------------------------------
.......AAGTCCACCAATATGATGG................................................................................................................................................................................................................................1912.002.00---------------------2.00---------------------------------------
.........................................ATTTTATTGGTAGGATT................................................................................................................................................................................................1721.501.50---1.50---------------------------------------------------------
....................................................AGGATTATATCAGTAGT.....................................................................................................................................................................................171.000.00-----------------------1.00-------------------------------------
...........................................................................................................TTTGGGATATGTAGAAGTTTTAAAAGTGCTTTC..............................................................................................................3311.001.00------------------------1.00------------------------------------
......................ATGGGTCACCGGGTTGATTATTTTATTG........................................................................................................................................................................................................2811.001.00--------------------------1.00----------------------------------
..............................................................................................................................................................................................TTTTCTTTTATGATTCCCC.........................................191.000.00----------------------------------------1.00--------------------
.................ATATGATGGGTCACCGGGTT.....................................................................................................................................................................................................................2011.001.00-------------------------------------------------------1.00-----
......................ATGGGTCACCGGGTTGATTATTTTACTGC.......................................................................................................................................................................................................291.000.00-----------------------------------------1.00-------------------
..............CCAATATGATGGGTCACCGGGTTG....................................................................................................................................................................................................................2411.001.00-------------------------------------------------1.00-----------
.......................TGGGTCACCGGGTTGATTA................................................................................................................................................................................................................1911.001.00---------------------------------------1.00---------------------
.....CAAAGTCCACCAATATGATGGGTCACCGG........................................................................................................................................................................................................................2911.001.00-------------------------------------1.00-----------------------
..............................CCGGGTTGATTATTTTATTGC.......................................................................................................................................................................................................211.000.00--------------1.00----------------------------------------------
...........................................................................................................................................................TGGTGATGGACATATGGCAG...........................................................................2011.001.00-------------------------1.00-----------------------------------
.............................................................................................................TGGGATATGTAGAAGTTTTAAAAGTGC..................................................................................................................2711.001.00--------------------------------------------1.00----------------
..............................................ATTGGTAGGATTATATCAGCA.......................................................................................................................................................................................211.000.00---------1.00---------------------------------------------------
..........................................................................................................................................................................................................................................TTTTCTAATAACAATCTAG191.000.00-----------------------------------------------------------1.00-
......................ATGGGTCACCGGGTTGATTATTTTATTGCT......................................................................................................................................................................................................3011.001.00---------------1.00---------------------------------------------
............................CACCGGGTTGATTATTTTATTGCT......................................................................................................................................................................................................241.000.00--1.00----------------------------------------------------------
..............................................................................................................GGGATATGTAGAAGTTTG..........................................................................................................................181.000.00-1.00-----------------------------------------------------------
......................................................................................................................................................................................TTCTGTTCTTTTCTTTTAC.................................................191.000.00-----------------------1.00-------------------------------------
.......................................................................................................TACATTTGGGATATGTAGAAGTT............................................................................................................................2311.001.00---------------------------------------------------------1.00---
...........CCACCAATATGATGGGTCACCGGGT......................................................................................................................................................................................................................2511.001.00-----------1.00-------------------------------------------------
.............................ACCGGGTTGATTATTTTATTGCT......................................................................................................................................................................................................231.000.00-----------------------------------1.00-------------------------
..................TATGATGGGTCACCGGGTTGATT.................................................................................................................................................................................................................2311.001.00---------------1.00---------------------------------------------
...........................................................................................................................................................................................................TTGAAAATGTCTATAATAAAAAG........................2340.250.25------------------------------------------------------------0.25

Antisense strand
TCCAACAAAGTCCACCAATATGATGGGTCACCGGGTTGATTATTTTATTGGTAGGATTATATCAGTAAAATCGTATTAGTGTACATATGTTATGAAGTTAACCTACATTTGGGATATGTAGAAGTTTTAAAAGTGCTTTCCAAATGTGATTGTTCTGGTGATGGACATATGGCAGTTGATTATTCTGTTCTTTTCTTTTATGATTGAAAATGTCTATAATAAAAAGATAACATGTTTTCTAATAACAATT
..................................................(((((.(((.....((((....((((....)))).....)))).....))))))))................................................................................................................................................
..................................................51............................................................................129.......................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR343336SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR343337SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
....................................................................................................................TGTAGAAGTTTTAAAACC.................................................................................................................... 182.000.00---------------------------------1.00----------------------1.00----
......................................................................................................................................................................ATATGGCAGTTGATTATG.................................................................. 181.000.00--------------------------------------1.00----------------------