| (2) AGO2.ip | (2) B-CELL | (18) CELL-LINE | (4) CERVIX | (1) KIDNEY | (2) LIVER | (4) SKIN | (1) XRN.ip |
| CAAAAAAAAGCAGAAATTGCTAGAAGAAAACGTTAGTGCTTTCAAAACAGGTATGTTTAGAGATAGACCTTTTTTGGGGGGAAAAAAAAAACAGGTTTTTAAAGCTTGCAATATTTAAGAAGCAGTAGAATAATAATAGAAGCTAAGTATATGCAAGTCATTGCACTATTTTATGGTGTTTGTTATAAAGTAAGTGTTATTAATAGTCTCATTTGACAAATAAGGAAACTGAGGCATTTGCCTAAGGTCA ................................................................................................(((((..((((............))))..)))))........................................................................................................................ ......................................................................71................................................................137............................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR037937(GSM510475) 293cand2. (cell line) | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR029132(GSM416761) MB-MDA231. (cell line) | SRR040010(GSM532895) G529N. (cervix) | SRR330883(SRX091721) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR040037(GSM532922) G243T. (cervix) | GSM416733(GSM416733) HEK293. (cell line) | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR029128(GSM416757) H520. (cell line) | SRR037931(GSM510469) 293GFP. (cell line) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | GSM956925Ago2D5(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | SRR330877(SRX091715) tissue: skin psoriatic involveddisease state:. (skin) | GSM956925Ago2PAZ(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR037933(GSM510471) 293cand4_rep2. (cell line) | SRR553575(SRX182781) source: Kidney. (Kidney) | SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR040032(GSM532917) G603N. (cervix) | SRR040024(GSM532909) G613N. (cervix) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................GGGGGGAAAAAAAAAA............................................................................................................................................................... | 16 | 0 | 33.00 | 33.00 | 8.00 | 9.00 | 9.00 | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................................GGGGGGAAAAAAAAAACAAAAA......................................................................................................................................................... | 22 | 11.00 | 0.00 | - | - | - | 6.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ..........................................................................TGGGGGGAAAAAAAAA................................................................................................................................................................ | 16 | 0 | 5.00 | 5.00 | 3.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................ATTTAAGAAGCAGTAGAATAA..................................................................................................................... | 21 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................TGGGGGGAAAAAAAAAA............................................................................................................................................................... | 17 | 0 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............ATTGCTAGAAGAAAACGTTAGCGC................................................................................................................................................................................................................... | 24 | 2.00 | 0.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................GGGGGGAAAAAAAAAACAACCA......................................................................................................................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................AAGTATATGCAAGTCCAG........................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........CAGAAATTGCTAGAAGAAAACGTT........................................................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............GAAATTGCTAGAAGAAAACGT......................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ............................AACGTTAGTGCTTTCAAAACA......................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................GGGGGGAAAAAAAAAACATAA.......................................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................GGGGGGAAAAAAAAAACGCTC.......................................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............ATTGCTAGAAGAAAACGTT........................................................................................................................................................................................................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................GGGGGGAAAAAAAAAACGAA........................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................TAGAAGAAAACGTTAGTGCTTT................................................................................................................................................................................................................ | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................GGGGGGAAAAAAAAAACAGTACC........................................................................................................................................................ | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........AGAAATTGCTAGAAGAAAAC........................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................TTTCAAAACAGGTATTTTC................................................................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................TTTAAGAAGCAGTAGAATA...................................................................................................................... | 19 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............AAATTGCTAGAAGAAAACGT......................................................................................................................................................................................................................... | 20 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............ATTGCTAGAAGAAAACGT......................................................................................................................................................................................................................... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - |
| .....................................................................................................................................................................................................................TGACAAATAAGGAAACTGA.................. | 19 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - |
| .............................................................GATAGACCTTTTTTG.............................................................................................................................................................................. | 15 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................TGGGGGGAAAAAAAAAACAC............................................................................................................................................................ | 20 | 9 | 0.11 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 | - |
| ..........................................................................TGGGGGGAAAAAAAAAACAAAAA......................................................................................................................................................... | 23 | 9 | 0.11 | 0.11 | - | - | - | - | - | - | - | - | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................TGGGGGGAAAAAAAAAACA............................................................................................................................................................. | 19 | 9 | 0.11 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 |
| CAAAAAAAAGCAGAAATTGCTAGAAGAAAACGTTAGTGCTTTCAAAACAGGTATGTTTAGAGATAGACCTTTTTTGGGGGGAAAAAAAAAACAGGTTTTTAAAGCTTGCAATATTTAAGAAGCAGTAGAATAATAATAGAAGCTAAGTATATGCAAGTCATTGCACTATTTTATGGTGTTTGTTATAAAGTAAGTGTTATTAATAGTCTCATTTGACAAATAAGGAAACTGAGGCATTTGCCTAAGGTCA ................................................................................................(((((..((((............))))..)))))........................................................................................................................ ......................................................................71................................................................137............................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR037937(GSM510475) 293cand2. (cell line) | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR029132(GSM416761) MB-MDA231. (cell line) | SRR040010(GSM532895) G529N. (cervix) | SRR330883(SRX091721) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR040037(GSM532922) G243T. (cervix) | GSM416733(GSM416733) HEK293. (cell line) | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR029128(GSM416757) H520. (cell line) | SRR037931(GSM510469) 293GFP. (cell line) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | GSM956925Ago2D5(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | SRR330877(SRX091715) tissue: skin psoriatic involveddisease state:. (skin) | GSM956925Ago2PAZ(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR037933(GSM510471) 293cand4_rep2. (cell line) | SRR553575(SRX182781) source: Kidney. (Kidney) | SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR040032(GSM532917) G603N. (cervix) | SRR040024(GSM532909) G613N. (cervix) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................................GTTATTAATAGTCTCTCTG.................................... | 19 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................GGGGGGAAAAAAAAAACACCCC......................................................................................................................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................TATAAAGTAAGTGTTATTTA............................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................ATAAAGTAAGTGTTATTTCA.............................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................AAAAAAAACAGGTTTATTT.................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................GAAAAAAAAAACAGGTGAG....................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |