uc003fch.2_intron_1_0_chr3_158384864

AAATGCATCTTGAAAGAACACTTTATTTAGTGTAAGAGAATAGATTTTGTCACATTAAATTGAAATTATGACATTCAATTTTTATTTTTACCTAAATGGAAATATTATATTCATCTAATCAAAGATGATTTTCAAAATTAAATGTAATTTTTGCCAAAGATATTAAGTTTTAAACAACACGTTTTTATTTTTTGTCATAGCAAAGAAATGATGACTTTATTGAATTAGACTACACCATTCTACTTCATAA ......................................................................(((((.((((((((((((((......))))))))......((((((......)))))).....)))))).))))).............((((..((((...((((.....))))..))))..))))...................................................... ....................................................................69.................................................................................................................................200................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR207116(GSM721078) Nuclear RNA. (cell line)	SRR189782	SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line)	SRR330893(SRX091731) tissue: skin psoriatic uninvolveddisease stat. (skin)	GSM359177(GSM359177) hela_nucl_a. (hela)	SRR387909(GSM843861) specific-host: Homo sapienshost cell line: Su. (cell line)	SRR029126(GSM416755) 143B. (cell line)
.........................................................................TTCAATTTTTATTTTTATTTC............................................................................................................................................................	21		119.00	0.00	102.00	8.00	9.00	-	-	-	-	-	-	-	-
.........................................................................TTCAATTTTTATTTTTATCTT............................................................................................................................................................	21		102.00	0.00	95.00	5.00	2.00	-	-	-	-	-	-	-	-
.........................................................................TTCAATTTTTATTTTTACTTT............................................................................................................................................................	21	5	22.80	0.40	20.60	1.40	0.80	-	-	-	-	-	-	-	-
..........................................................................TCAATTTTTATTTTTACCTT............................................................................................................................................................	20		4.00	0.00	3.00	-	1.00	-	-	-	-	-	-	-	-
.........................................................................TTCAATTTTTATTTTTATCTC............................................................................................................................................................	21		4.00	0.00	4.00	-	-	-	-	-	-	-	-	-	-
.........................................................................TTCAATTTTTATTTTTACCTT............................................................................................................................................................	21		3.00	0.00	3.00	-	-	-	-	-	-	-	-	-	-
..........................................................................TCAATTTTTATTTTTACTCT............................................................................................................................................................	20		3.00	0.00	3.00	-	-	-	-	-	-	-	-	-	-
.........................................................................TTCAATTTTTATTTTTATCCC............................................................................................................................................................	21		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-
.........................................................................TTCAATTTTTATTTTTATC..............................................................................................................................................................	19		2.00	0.00	1.00	-	-	1.00	-	-	-	-	-	-	-
.........................................................................TTCAATTTTTATTTTTATTGT............................................................................................................................................................	21		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................ACACGTTTTTATTTTTTTG.......................................................	19		2.00	0.00	-	-	-	2.00	-	-	-	-	-	-	-
..........................................................................TCAATTTTTATTTTTAGTTT............................................................................................................................................................	20		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................................................AAATGATGACTTTATTGAATTAGAC....................	25	1	2.00	2.00	-	-	-	-	2.00	-	-	-	-	-	-
.........................................................................TTCAATTTTTATTTTTACTTC............................................................................................................................................................	21	5	1.40	0.40	0.80	0.40	0.20	-	-	-	-	-	-	-	-
.........................................................................TTCAATTTTTATTTTTATCTA............................................................................................................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.........................................................................TTCAATTTTTATTTTTACTCT............................................................................................................................................................	21	5	1.00	0.40	1.00	-	-	-	-	-	-	-	-	-	-
.........................................................................TTCAATTTTTATTTTTATATC............................................................................................................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.........................................................................TTCAATTTTTATTTTTATCCT............................................................................................................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.........................................................................TTCAATTTTTATTTTTAATTC............................................................................................................................................................	21		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-
...................................................................................................................................................................................................................TGACTTTATTGAATTAGACTACACCA.............	26	1	1.00	1.00	-	-	-	-	-	-	-	-	1.00	-	-
...................................................................................................................................................................................CGTTTTTATTTTTTGTCATAGCAAAGA............................................	27	1	1.00	1.00	-	-	-	-	-	-	-	1.00	-	-	-
.........................................................................TTCAATTTTTATTTTTACCCA............................................................................................................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.........................................................................TTCAATTTTTATTTTTATGTT............................................................................................................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.........................................................................TTCAATTTTTATTTTTAGTTT............................................................................................................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.........................................................................TTCAATTTTTATTTTTACCTC............................................................................................................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.........................................................................TTCAATTTTTATTTTTATTTG............................................................................................................................................................	21		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
...........................................................................CAATTTTTATTTTTACCTT............................................................................................................................................................	19		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.........................................................................TTCAATTTTTATTTTTAC...............................................................................................................................................................	18	5	0.40	0.40	0.40	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................................................AAATGATGACTTTATTGA...........................	18	4	0.25	0.25	-	-	-	-	-	-	-	-	-	-	0.25
.........................................................................TTCAATTTTTATTTTTACTAT............................................................................................................................................................	21	5	0.20	0.40	0.20	-	-	-	-	-	-	-	-	-	-
.........................................................................TTCAATTTTTATTTTTACATT............................................................................................................................................................	21	5	0.20	0.40	0.20	-	-	-	-	-	-	-	-	-	-
.........................................................................TTCAATTTTTATTTTTACTAC............................................................................................................................................................	21	5	0.20	0.40	0.20	-	-	-	-	-	-	-	-	-	-

AAATGCATCTTGAAAGAACACTTTATTTAGTGTAAGAGAATAGATTTTGTCACATTAAATTGAAATTATGACATTCAATTTTTATTTTTACCTAAATGGAAATATTATATTCATCTAATCAAAGATGATTTTCAAAATTAAATGTAATTTTTGCCAAAGATATTAAGTTTTAAACAACACGTTTTTATTTTTTGTCATAGCAAAGAAATGATGACTTTATTGAATTAGACTACACCATTCTACTTCATAA
......................................................................(((((.((((((((((((((......))))))))......((((((......)))))).....)))))).))))).............((((..((((...((((.....))))..))))..))))......................................................
....................................................................69.................................................................................................................................200................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR207116(GSM721078)
Nuclear RNA. (cell line)

SRR189782

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)

GSM359177(GSM359177)
hela_nucl_a. (hela)

SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)

SRR029126(GSM416755)
143B. (cell line)

.........................................................................TTCAATTTTTATTTTTATTTC............................................................................................................................................................

119.00

0.00

102.00

8.00

9.00

.........................................................................TTCAATTTTTATTTTTATCTT............................................................................................................................................................

102.00

0.00

95.00

5.00

2.00

.........................................................................TTCAATTTTTATTTTTACTTT............................................................................................................................................................

22.80

0.40

20.60

1.40

0.80

..........................................................................TCAATTTTTATTTTTACCTT............................................................................................................................................................

4.00

0.00

3.00

1.00

.........................................................................TTCAATTTTTATTTTTATCTC............................................................................................................................................................

4.00

0.00

4.00

.........................................................................TTCAATTTTTATTTTTACCTT............................................................................................................................................................

3.00

0.00

3.00

..........................................................................TCAATTTTTATTTTTACTCT............................................................................................................................................................

3.00

0.00

3.00

.........................................................................TTCAATTTTTATTTTTATCCC............................................................................................................................................................

2.00

0.00

2.00

.........................................................................TTCAATTTTTATTTTTATC..............................................................................................................................................................

2.00

0.00

1.00

.........................................................................TTCAATTTTTATTTTTATTGT............................................................................................................................................................

2.00

0.00

2.00

................................................................................................................................................................................ACACGTTTTTATTTTTTTG.......................................................

2.00

0.00

2.00

..........................................................................TCAATTTTTATTTTTAGTTT............................................................................................................................................................

2.00

0.00

2.00

.............................................................................................................................................................................................................AAATGATGACTTTATTGAATTAGAC....................

2.00

.........................................................................TTCAATTTTTATTTTTACTTC............................................................................................................................................................

1.40

0.40

0.80

0.40

0.20

.........................................................................TTCAATTTTTATTTTTATCTA............................................................................................................................................................

1.00

0.00

1.00

.........................................................................TTCAATTTTTATTTTTACTCT............................................................................................................................................................

1.00

0.40

1.00

.........................................................................TTCAATTTTTATTTTTATATC............................................................................................................................................................

1.00

0.00

1.00

.........................................................................TTCAATTTTTATTTTTATCCT............................................................................................................................................................

1.00

0.00

1.00

.........................................................................TTCAATTTTTATTTTTAATTC............................................................................................................................................................

1.00

0.00

1.00

...................................................................................................................................................................................................................TGACTTTATTGAATTAGACTACACCA.............

1.00

...................................................................................................................................................................................CGTTTTTATTTTTTGTCATAGCAAAGA............................................

1.00

.........................................................................TTCAATTTTTATTTTTACCCA............................................................................................................................................................

1.00

0.00

1.00

.........................................................................TTCAATTTTTATTTTTATGTT............................................................................................................................................................

1.00

0.00

1.00

.........................................................................TTCAATTTTTATTTTTAGTTT............................................................................................................................................................

1.00

0.00

1.00

.........................................................................TTCAATTTTTATTTTTACCTC............................................................................................................................................................

1.00

0.00

1.00

.........................................................................TTCAATTTTTATTTTTATTTG............................................................................................................................................................

1.00

0.00

1.00

...........................................................................CAATTTTTATTTTTACCTT............................................................................................................................................................

1.00

0.00

1.00

.........................................................................TTCAATTTTTATTTTTAC...............................................................................................................................................................

0.40

.............................................................................................................................................................................................................AAATGATGACTTTATTGA...........................

0.25

.........................................................................TTCAATTTTTATTTTTACTAT............................................................................................................................................................

0.20

0.40

0.20

.........................................................................TTCAATTTTTATTTTTACATT............................................................................................................................................................

0.20

0.40

0.20

.........................................................................TTCAATTTTTATTTTTACTAC............................................................................................................................................................

0.20

0.40

0.20

AAATGCATCTTGAAAGAACACTTTATTTAGTGTAAGAGAATAGATTTTGTCACATTAAATTGAAATTATGACATTCAATTTTTATTTTTACCTAAATGGAAATATTATATTCATCTAATCAAAGATGATTTTCAAAATTAAATGTAATTTTTGCCAAAGATATTAAGTTTTAAACAACACGTTTTTATTTTTTGTCATAGCAAAGAAATGATGACTTTATTGAATTAGACTACACCATTCTACTTCATAA ......................................................................(((((.((((((((((((((......))))))))......((((((......)))))).....)))))).))))).............((((..((((...((((.....))))..))))..))))...................................................... ....................................................................69.................................................................................................................................200................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR207116(GSM721078) Nuclear RNA. (cell line)	SRR189782	SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line)	SRR330893(SRX091731) tissue: skin psoriatic uninvolveddisease stat. (skin)	GSM359177(GSM359177) hela_nucl_a. (hela)	SRR387909(GSM843861) specific-host: Homo sapienshost cell line: Su. (cell line)	SRR029126(GSM416755) 143B. (cell line)
.............................................................................................AAATGGAAATATTATAGA...........................................................................................................................................	18		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................................................................................ATGAAGTAGAATGGTGTAGT..	20	1	1.00	1.00	-	-	-	-	-	-	1.00	-	-	-	-
.........................................................................................................................................................................................................................................ACCATTCTACTTCATAATA	19		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-
.................................................................................................................................................ATCTTTGGCAAAAATT.........................................................................................	16	5	0.40	0.40	-	-	-	-	-	-	-	-	-	0.40	-

Size

Perfect hit

Total Norm

Perfect Norm

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR207116(GSM721078)
Nuclear RNA. (cell line)

SRR189782

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)

GSM359177(GSM359177)
hela_nucl_a. (hela)

SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)

SRR029126(GSM416755)
143B. (cell line)

.............................................................................................AAATGGAAATATTATAGA...........................................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................................ATGAAGTAGAATGGTGTAGT..

1.00

.........................................................................................................................................................................................................................................ACCATTCTACTTCATAATA

1.00

0.00

1.00

.................................................................................................................................................ATCTTTGGCAAAAATT.........................................................................................

0.40