| (1) BRAIN | (8) CELL-LINE | (2) CERVIX | (4) LIVER | (4) SKIN |
| AAATGTACGAATGGATGAAAAAGCTGACAATGCACATGTAAAAGGAACACTGGGAAGAATTCATGTTCTATAATTAAGATAAAATATTAGAAATATTTTCTCTAGAGTATATCAGTGAGGAACAAGGTGTACTAGTAGGTTTTCTCTTGAAAAAAAACACTCATCAATTCATTTGGCTGCCTTTTTTTTTTTAATTTCAGCTTTGTTTAATTATGACTTTCTGTCAAGATGAACAGCTGATAGACTTAAT .......................................................................................................................(((.(((((......((...(((((....)))))...)).....((((.....))))..))))).)))............................................................... .......................................................................................................................120.............................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330912(SRX091750) tissue: normal skindisease state: normal. (skin) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR039620(GSM531983) HBV(+) Adjacent Tissue Sample 2. (liver) | GSM450604(GSM450604) miRNA sequencing raw reads from post-mortem s. (brain) | SRR040036(GSM532921) G243N. (cervix) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330870(SRX091708) tissue: skin psoriatic involveddisease state:. (skin) | SRR040012(GSM532897) G648N. (cervix) | SRR039624(GSM531987) HBV(-) HCV(-) Adjacent Tissue Sample. (liver) | SRR037937(GSM510475) 293cand2. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................CCTTTTTTTTTTTAATTTAAG.................................................. | 21 | 44.00 | 0.00 | 13.00 | 8.00 | 13.00 | 10.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................CCTTTTTTTTTTTAATTTACTG................................................. | 22 | 4.00 | 0.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................CCTTTTTTTTTTTAATTTACTT................................................. | 22 | 3.00 | 0.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................TTTGGCTGCCTTTTTTTTTAC.......................................................... | 21 | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................................GATGAACAGCTGATAGACTTGA. | 22 | 2.00 | 0.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................CACTGGGAAGAATTCTG.......................................................................................................................................................................................... | 17 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | |
| ...................................................................................................................................................................................CCTTTTTTTTTTTAATTTATTG................................................. | 22 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................CTTTTTTTTTTTAATTTCAATC................................................ | 22 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................GCTGCCTTTTTTTTTTCAAG....................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................TGGCTGCCTTTTTTTTTA........................................................... | 18 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................................................................TGAACAGCTGATAGACTTGAT | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................CCTTTTTTTTTTTAATTTACCG................................................. | 22 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................TGGCTGCCTTTTTTTTTG........................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................TGCCTTTTTTTTTTTAATCCTG................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................TGGCTGCCTTTTTTTTTTTCTTT...................................................... | 23 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................CTTTTTTTTTTTAATTTCTATA................................................ | 22 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................................................................AGATGAACAGCTGATAGATA.... | 20 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................CCTTTTTTTTTTTAATTTATG.................................................. | 21 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................TGGCTGCCTTTTTTTTTTTTTG....................................................... | 22 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................AGGTGTACTAGTAGGTTTTCT......................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................TGGCTGCCTTTTTTTTTTTTGGA...................................................... | 23 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................TGCCTTTTTTTTTTTAATTTTTTA................................................. | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................................................................AGATGAACAGCTGATAGACTTGAT | 24 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................GTAAAAGGAACACTGCA.................................................................................................................................................................................................... | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ....................................................................................................................................................................................CTTTTTTTTTTTAATTTCAATCT............................................... | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................TGGCTGCCTTTTTTTTTTTTAAC...................................................... | 23 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................GCTGCCTTTTTTTTTCGTG........................................................ | 19 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................AGGAACAAGGTGTACTAGTAGGTTTT........................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................AAGGAACACTGGGAAGAAT.............................................................................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................TTGGCTGCCTTTTTTTTTTAA......................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| .....................................GTAAAAGGAACACTGGGAAGAATT............................................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................................................................................................................................................................................................................................AGATGAACAGCTGATAGAC..... | 19 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................CCTTTTTTTTTTTAATTTCAG.................................................. | 21 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................CTTTTTTTTTTTAATTTCAG.................................................. | 20 | 7 | 0.29 | 0.29 | 0.29 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AAATGTACGAATGGATGAAAAAGCTGACAATGCACATGTAAAAGGAACACTGGGAAGAATTCATGTTCTATAATTAAGATAAAATATTAGAAATATTTTCTCTAGAGTATATCAGTGAGGAACAAGGTGTACTAGTAGGTTTTCTCTTGAAAAAAAACACTCATCAATTCATTTGGCTGCCTTTTTTTTTTTAATTTCAGCTTTGTTTAATTATGACTTTCTGTCAAGATGAACAGCTGATAGACTTAAT .......................................................................................................................(((.(((((......((...(((((....)))))...)).....((((.....))))..))))).)))............................................................... .......................................................................................................................120.............................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330912(SRX091750) tissue: normal skindisease state: normal. (skin) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR039620(GSM531983) HBV(+) Adjacent Tissue Sample 2. (liver) | GSM450604(GSM450604) miRNA sequencing raw reads from post-mortem s. (brain) | SRR040036(GSM532921) G243N. (cervix) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330870(SRX091708) tissue: skin psoriatic involveddisease state:. (skin) | SRR040012(GSM532897) G648N. (cervix) | SRR039624(GSM531987) HBV(-) HCV(-) Adjacent Tissue Sample. (liver) | SRR037937(GSM510475) 293cand2. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................................................................ATTTGGCTGCCTTTTACG.............................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| .............................................................................................................................................................................................TTTAATTTCAGCTTTGGG........................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................TTTAATTTCAGCTTTGGGA.......................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| ..........................................................................................................................................................................................AACAAAGCTGAAATTAAAAAA........................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .........................................................................TTAAGATAAAATATTCTTC.............................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................AAAAAAAAGGCAGCCAAA............................................................. | 18 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 |