ID: uc003exb.1_intron_3_0_chr3_149093557_r.3p
GENE: TM4SF1(1)
chr3:149093507-149093756-


(1)
AGO1.ip 		(1)
AGO2.ip 		(1)
AGO3.ip 		(1)
B-CELL 		(9)
BREAST 		(14)
CELL-LINE 		(4)
HEART 		(12)
HELA 		(5)
LIVER 		(1)
OTHER 		(1)
RRP40.ip 		(5)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(2)
XRN.ip

Sense strand
AGATTACATGAAAACAAGCAGATATGACATTTAAATGGTCTTTTTCTCCTCAGAGGTTTACATTCTTTGAGATATCTGGTCAACCTAATCAAAGCCAGTTAATGTCATTGGAAATAAATATATTTTACCAAGAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGACCTGACTTTGTTTGTTTCCTAACCAGATGCTCCTGCCAGCATTTGTCTTCATTGGGCTGGAACAGGATGACTGCTG
...............................................................................................................................................(((......((((((..(((..((........))..))).))))))........)))..................................................
.............................................................................................................................................142.......................................................200................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		DRR001484(DRX001038)
"Hela long nuclear cell fraction, control". (hela)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		GSM359174(GSM359174)
hela_5_1. (hela)		TAX577740(Rovira)
total RNA. (breast)		SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		TAX577453(Rovira)
total RNA. (breast)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		TAX577743(Rovira)
total RNA. (breast)		SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
...............................................................................................................................CCAAGAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGACCTGACTTTGTTTGTTTCCTAACCAGT.................................................74119.005.0019.00----------------------------------------------------
.............................................................................................................................TACCAAGAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGACCTGACTTTGTTTGTTTCCTAACCAG..................................................75116.0016.0012.00-4.00--------------------------------------------------
...................................................................................................................................GAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGACCTGACTTTGTTTGTTTCCTAACCA...................................................68114.0014.0014.00----------------------------------------------------
..............................................................................................................................ACCAAGAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGACCTGACTTTGTTTGTTTCCTAACCAG..................................................74112.0012.00--12.00--------------------------------------------------
...................................................................................................................................GAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGACCTGACTTTGTTTGTTTCCTAACCAG..................................................69111.0011.00--11.00--------------------------------------------------
.....................................................................................................................................................................................................................................GCTGGAACAGGATGACTG...18110.0010.00-2.00--5.003.00-----------------------------------------------
............................................................................................................................TTACCAAGAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGACCTGACTTTGTTTGTTTCCTAACCAG..................................................76110.0010.0010.00----------------------------------------------------
..................................................................................................................................AGAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGACCTGACTTTGTTTGTTTCCTAACCT...................................................6910.000.0010.00----------------------------------------------------
...............................................................................................................................CCAAGAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGACCTGACTTTGTTTGTTTCCTAACC....................................................71110.0010.0010.00----------------------------------------------------
................................................................................................................................................................................................................................ATTGGGCTGGAACAGGATGACTGCT.2519.009.00-1.00-2.00--3.001.00-1.00---------------------------------1.00---------
................................................................................................................................................................................................................................ATTGGGCTGGAACAGGATGACT....2219.009.00-6.00----2.001.00---------------------------------------------
.................................................................................................................................................................................................................................TTGGGCTGGAACAGGATGACT....2118.008.00-2.00----3.001.00-----------------------------1.00---1.00-----------
................................................................................................................................................................................................................................ATTGGGCTGGAACAGGATGACTG...2317.007.00-4.00----2.001.00---------------------------------------------
...............................................................................................................................CCAAGAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGACCTGACTTTGTTTGTTTCCTAACCA...................................................7217.007.006.00------------1.00---------------------------------------
................................................................................................................................................................................................................................ATTGGGCTGGAACAGGATGA......2016.006.00-6.00---------------------------------------------------
............................................................................................................................TTACCAAGAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGACCTGACTTTGTTTGTTTCCT........................................................7016.006.006.00----------------------------------------------------
...............................................................................................................................CCAAGAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGACCTGACTTTGTTTGTTTCCTAACCAG..................................................7315.005.00--4.00----------1.00---------------------------------------
...........................................................................................................................TTTACCAAGAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGACCTGACTTTGTTTGTTTCCTAACCAG..................................................7715.005.00--5.00--------------------------------------------------
.................................................................................................................................................................................................................................TTGGGCTGGAACAGGATGACTGC..2315.005.00-4.00-----1.00---------------------------------------------
..........................................................................................................................TTTTACCAAGAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGACCTGACTTTGTTTGTTTCCTAACCAG..................................................7815.005.005.00----------------------------------------------------
..................................................................................................................................................................................................................................TGGGCTGGAACAGGATGACT....2015.005.00-3.00-------2.00-------------------------------------------
..................................................................................................................................................................................................................................TGGGCTGGAACAGGATGAC.....1914.004.00-3.00-1.00-------------------------------------------------
................................................................................................................................................................................................................................ATTGGGCTGGAACAGGATGAC.....2114.004.00-2.00-1.00---1.00---------------------------------------------
...........................................................................................................................................................................................................................TCTTCATTGGGCTGGAACAGG..........2114.004.00-4.00---------------------------------------------------
................................................................................................................................................................................................................................ATTGGGCTGGAACAGGATG.......1914.004.00-4.00---------------------------------------------------
.................................................................................................................................................................................................................................TTGGGCTGGAACAGGATG.......1814.004.00-4.00---------------------------------------------------
...................................................................................................................................................................................................................AGCATTTGTCTTCATTGGGCTGGAA..............2514.004.00-4.00---------------------------------------------------
.........................................................................................................................ATTTTACCAAGAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGACCTGACTTTGTTTGTTTCCTAACC....................................................7713.003.003.00----------------------------------------------------
......................................................................................................................................................ATATGAGCCTGAGCAAGACAATGACCTGACTTTGTTTGTTTCCTAACCAG..................................................5013.003.003.00----------------------------------------------------
..................................................................................................................................................................................................................................TGGGCTGGAACAGGATGACTGC..2213.003.00-1.00--------------1.00-------------1.00----------------------
..................................................................................................................................................ACCCATATGAGCCTGAGCAAGACAA...............................................................................2513.003.00---2.001.00------------------------------------------------
..................................................................................................................................................................................................................................TGGGCTGGAACAGGATGACTGCT.2313.003.00-----------------1.00----1.00------------1.00-----------------
....................................................................................................................................................CCATATGAGCCTGAGCAAGACAAT..............................................................................2412.002.00---2.00-------------------------------------------------
.................................................................................................................................................................................................................................TTGGGCTGGAACAGGATGACTG...2212.002.00-2.00---------------------------------------------------
...............................................................................................................................CCAAGAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGACCTGACTTTGTTTGTTTCCTA.......................................................6812.002.00----------2.00------------------------------------------
......................................................................................................................................................................................................................ATTTGTCTTCATTGGGCTGGAACAGGATGAC.....3112.002.00-------------------2.00---------------------------------
.............................................................................................................................................................................................................................TTCATTGGGCTGGAACAGGA.........2012.002.00-2.00---------------------------------------------------
..........................................................................................................................................CTAACCTGACCCATATGAGC............................................................................................2012.002.00--------2.00--------------------------------------------
................................................................................................................................CAAGAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGACCTGACTTTGTTTGTTTCCTAACCAG..................................................7212.002.002.00----------------------------------------------------
................................................................................................................................................................................TGACTTTGTTTGTTTCCTAACCAGAT................................................2612.002.00----2.00------------------------------------------------
.....................................................................................................................................................CATATGAGCCTGAGCAAGACAA...............................................................................2212.002.00---1.00----1.00--------------------------------------------
...............................................................................................................................................................................................................................CATTGGGCTGGAACAGGATGAC.....2212.002.00-2.00---------------------------------------------------
......................................................................................................................................................................................................................ATTTGTCTTCATTGGGCTGGAACAG...........2512.002.00---2.00-------------------------------------------------
..................................................................................................................................................................................................................................TGGGCTGGAACAGGATGACTGCTTT2512.003.00-2.00---------------------------------------------------
.....................................................................................................................................................................................TTGTTTGTTTCCTAACCAG..................................................1912.002.00---------------2.00-------------------------------------
....................................................................................................................AATATATTTTACCAAGAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGAC...........................................................................5912.002.00------------2.00----------------------------------------
.....................................................................................................................................................................................................................................GCTGGAACAGGATGACT....1712.002.00------------------2.00----------------------------------
.............................................................................................................................................................................................................................TTCATTGGGCTGGAACAGG..........1912.002.00-1.00----------------------------------------------1.00----
..................................................................................................................................................................................................................................TGGGCTGGAACAGGATGACTGCTG2412.002.00-----------------1.00----------1.00------------------------
.............................................................................................................................................................CCTGAGCAAGACAATGACCTGA.......................................................................2212.002.00-2.00---------------------------------------------------
..............................................................................................................................................................................................................................TCATTGGGCTGGAACAGGATGAC.....2312.002.00-----------1.00----------------------------1.00------------
...............................................................................................................................................................................CTGACTTTGTTTGTTTCCT........................................................1912.002.00-----2.00-----------------------------------------------
......................................................................................................................................................................................................................ATTTGTCTTCATTGGGCTGGAAC.............2312.002.00---2.00-------------------------------------------------
.........................................................................................................................................................................................................................TGTCTTCATTGGGCTGGAAC.............2012.002.00----2.00------------------------------------------------
.........................................................................................................................................................................................................................TGTCTTCATTGGGCTGGAACAGGATG.......2612.002.00-1.00-1.00-------------------------------------------------
.................................................................................................................................................................................GACTTTGTTTGTTTCCTAACCAG..................................................2311.001.00--------------------------------------------1.00--------
..................................................................................................................................................................................................................................TGGGCTGGAACAGGATG.......1721.001.00-------------------------1.00---------------------------
...............................................................................................................................CCAAGAGATGCCTAACCTGACCCA...................................................................................................2411.001.00---------------------------1.00-------------------------
..........................................................................................................................................................................................................................GTCTTCATTGGGCTGGAACAGGAT........2411.001.00--------------------------1.00--------------------------
..............................................................................................................................................................................................................................TCATTGGGCTGGAACAGGATGACT....2411.001.00------1.00----------------------------------------------
................................................................................................................................................................................................................................ATTGGGCTGGAACAGGATGACTGCTG2611.001.00---1.00-------------------------------------------------
...............................................................................................................................................CTGACCCATATGAGCCTGAGCAAGACAA...............................................................................2811.001.00---------------------1.00-------------------------------
........................................................................................................................TATTTTACCAAGAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGACCTGACTT....................................................................6211.001.00----------1.00------------------------------------------
...........................................................................................................................................TAACCTGACCCATATGAGC............................................................................................1911.001.00-----1.00-----------------------------------------------
............................................................................................................................................................................................................................CTTCATTGGGCTGGAACAGGA.........2111.001.00---1.00-------------------------------------------------
................................................................................................................................................................................................................GCCAGCATTTGTCTTCATTGGG....................2211.001.00-----1.00-----------------------------------------------
....................................................................................................................................................CCATATGAGCCTGAGCAAGA..................................................................................2011.001.00-1.00---------------------------------------------------
.................................................................................................................................................................................................................................TTGGGCTGGAACAGGATGACTGCTGTT2711.001.00-1.00---------------------------------------------------
..............................................................................................................................ACCAAGAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGACCTGACTTTGT.................................................................5911.001.00------------1.00----------------------------------------
..........................................................................................................................................................GAGCCTGAGCAAGACAATGACCTGA.......................................................................2511.001.00-1.00---------------------------------------------------
.........................................................................................................................ATTTTACCAAGAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGACCTGACTTTGTTTGTTTCCTAACCAG..................................................7911.001.00-------------1.00---------------------------------------
.................................................................TTTGAGATATCTGGTCAACC.....................................................................................................................................................................2011.001.00-----1.00-----------------------------------------------
.............................................................................................................................................................................................................................TTCATTGGGCTGGAACAGGATGACT....2511.001.00-1.00---------------------------------------------------
........................................................................................................................................................ATGAGCCTGAGCAAGACAA...............................................................................1911.001.00-1.00---------------------------------------------------
.............................................................ATTCTTTGAGATATCTGGTCCACC.....................................................................................................................................................................241.000.00---1.00-------------------------------------------------
..........................................................................................................................................................................................................................GTCTTCATTGGGCTGGAACAGGATG.......2511.001.00-1.00---------------------------------------------------
....................................................................................................................................AGATGCCTAACCTGACCCATATGAGCCTGAGCA.....................................................................................3311.001.00----1.00------------------------------------------------
..................................................................................................................................................ACCCATATGAGCCTGAGCAAGACA................................................................................2411.001.00------1.00----------------------------------------------
................................................................................................................................................TGACCCATATGAGCCTGAGCAAG...................................................................................2311.001.00-1.00---------------------------------------------------
.........................................................................................................................................................................................................................TGTCTTCATTGGGCTGGAACAGGCTG.......261.000.00---1.00-------------------------------------------------
................................................................................................................................CAAGAGATGCCTAACCTGACC.....................................................................................................2111.001.00-----1.00-----------------------------------------------
.................................................................................................................................................................................................................................TTGGGCTGGAACAGGATGT......1911.004.00-1.00---------------------------------------------------
..............................................................................................................................................CCTGACCCATATGAGCCTGAGC......................................................................................2211.001.00-----1.00-----------------------------------------------
..............................................................................................................................................................CTGAGCAAGACAATGACCTGAC......................................................................2211.001.00-------1.00---------------------------------------------
......................................................................................................................................................................................................AGATGCTCCTGCCAGCATTTGTCTTCATTG......................3011.001.00-------------------------------------------------1.00---
.....................................................................................................................................................CATATGAGCCTGAGCAAGACAATGACCTGACTTTGTTTGTTTCCTAACCAG..................................................5111.001.00--1.00--------------------------------------------------
............................................TCTCCTCAGAGGTTTACATTCTT.......................................................................................................................................................................................2311.001.00-----1.00-----------------------------------------------
.....................................................................................................................................................................................................................................GCTGGAACAGGATGACTGCTG2111.001.00---------------------------------------1.00-------------
.......................................................................................................GTCATTGGAAATAAATATATTTTACCAAGAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGACCTGACTTTGTTTGTTTCCTAACCA...................................................9611.001.00----------1.00------------------------------------------
................................................................................................................................................................GAGCAAGACAATGACCTG........................................................................1811.001.00----1.00------------------------------------------------
.................................................................................................................................................................................GACTTTGTTTGTTTCCTAACCAGAT................................................2511.001.00----------------------------------1.00------------------
........TGAAAACAAGCAGATATGACATTT..........................................................................................................................................................................................................................2411.001.00-----------1.00-----------------------------------------
................................................................................................................................................................GAGCAAGACAATGACCTGACTTTGTTTGT.............................................................2911.001.00--------------------------------------1.00--------------
...............................................................................................................................................................................................................................CATTGGGCTGGAACAGGATGA......2111.001.00---------1.00-------------------------------------------
..............................................................................................................................................................................................................................TCATTGGGCTGGAACAGGAT........2011.001.00----------------1.00------------------------------------
......................................................................................................................................................ATATGAGCCTGAGCAAGAC.................................................................................1911.001.00-----1.00-----------------------------------------------
............................................................................................................................................................GCCTGAGCAAGACAATGACCTGAC......................................................................2411.001.00--------1.00--------------------------------------------
...............................................................................................................................CCAAGAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGACCTGACTTTGTT................................................................5911.001.00----------1.00------------------------------------------
.............................................................................................................................................................................................................................TTCATTGGGCTGGAACAGGAT........2111.001.00---------1.00-------------------------------------------
.............................................................................................GCCAGTTAATGTCATTGG...........................................................................................................................................1811.001.00-----1.00-----------------------------------------------
........................................................................................................................................GCCTAACCTGACCCATATGAGC............................................................................................2211.001.00-1.00---------------------------------------------------
.................................................................................................................................................................................................................................TTGGGCTGGAACAGGATGACTGCT.2411.001.00------1.00----------------------------------------------
...............................................................................................................................................CTGACCCATATGAGCCTGA........................................................................................1911.001.00---1.00-------------------------------------------------
.................................................................................................................................................................................................................................TTGGGCTGGAACAGGATGACTGAATT2611.002.00-1.00---------------------------------------------------
................................................................................................................................................................................................................................ATTGGGCTGGAACAGGAT........1821.001.00-----0.50----------------------------------------------0.50
.....................................................................................................................................................................................................................................GCTGGAACAGGATGACTGCT.2011.001.00-1.00---------------------------------------------------
.................................................................................................................................................................................................................................TTGGGCTGGAACAGGATGAC.....2011.001.00-1.00---------------------------------------------------
................................................................................................................................................................................................................................ATTGGGCTGGAACAGGATGACTT...2311.009.00-1.00---------------------------------------------------
.................................................................................................................................................................................................................................TTGGGCTGGAACAGGATGACTGCTG2511.001.00-------1.00---------------------------------------------
.....................................GTCTTTTTCTCCTCAGAGGTTTACAT...........................................................................................................................................................................................2611.001.00--------------------------------1.00--------------------
.................................................................................................................................................................................................................................TTGGGCTGGAACAGGATGACG....2111.001.00------------------------------------1.00----------------
...............................................................................................................................................................................................................................CATTGGGCTGGAACAGGATGACT....2311.001.00-1.00---------------------------------------------------
..................................................................................................................................AGAGATGCCTAACCTGA.......................................................................................................1711.001.00--------1.00--------------------------------------------
......................................................................................................................TATATTTTACCAAGAGAT..................................................................................................................1811.001.00----1.00------------------------------------------------
.............................................................................................................................................ACCTGACCCATATGAGCCTGAGCAAGA..................................................................................2711.001.00---1.00-------------------------------------------------
..................................................................................................................................................................................................................................TGGGCTGGAACAGGATGA......1820.500.50---------------------------------------------------0.50-
.................................................................................................................................................................AGCAAGACAATGACCTG........................................................................1720.500.50--------------------------------------------------0.50--
..................................................................................................................................................................GCAAGACAATGACCTGA.......................................................................1720.500.50---------------------0.50-------------------------------
................................................................................................................................................................................................................................ATTGGGCTGGAACAGGA.........1730.330.33----0.33------------------------------------------------
.................................................................................................................................................................................................................................TTGGGCTGGAACAGGA.........1640.250.25----0.25------------------------------------------------
.......................................................................................................................................................................................................................................TGGAACAGGATGACTG...1660.170.17----0.17------------------------------------------------

Antisense strand
AGATTACATGAAAACAAGCAGATATGACATTTAAATGGTCTTTTTCTCCTCAGAGGTTTACATTCTTTGAGATATCTGGTCAACCTAATCAAAGCCAGTTAATGTCATTGGAAATAAATATATTTTACCAAGAGATGCCTAACCTGACCCATATGAGCCTGAGCAAGACAATGACCTGACTTTGTTTGTTTCCTAACCAGATGCTCCTGCCAGCATTTGTCTTCATTGGGCTGGAACAGGATGACTGCTG
...............................................................................................................................................(((......((((((..(((..((........))..))).))))))........)))..................................................
.............................................................................................................................................142.......................................................200................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		DRR001484(DRX001038)
"Hela long nuclear cell fraction, control". (hela)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		GSM359174(GSM359174)
hela_5_1. (hela)		TAX577740(Rovira)
total RNA. (breast)		SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		TAX577453(Rovira)
total RNA. (breast)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		TAX577743(Rovira)
total RNA. (breast)		SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
......................................................................................................................................ATATGGGTCAGGTTAGGCAT................................................................................................ 2013.003.00--------------3.00--------------------------------------
..................................................................................................................TAAATATATTTTACCAAAAAA................................................................................................................... 211.000.00-----------------------1.00-----------------------------
.....................................................................................TAATCAAAGCCAGTTATAAT................................................................................................................................................. 201.000.00--------------------1.00--------------------------------
..........................................................................GGCTTTGATTAGGTTGACCAGA.......................................................................................................................................................... 2211.001.00---1.00-------------------------------------------------
............................................TCTCCTCAGAGGTTTCCTC........................................................................................................................................................................................... 191.000.00-----------------------------------------------1.00-----
.............................................................................................................................................................................................................................TTCATTGGGCTGGAACCC........... 181.000.00-------------------------------1.00---------------------
................................................................................................................................ATGGGTCAGGTTAGGCATCTCTTG.................................................................................................. 2411.001.00-----------------------------1.00-----------------------
...............................................AAGAATGTAAACCTCTGAGG....................................................................................................................................................................................... 2011.001.00-----------1.00-----------------------------------------
.......................................................................................................................................TGCCTAACCTGACCCGGAC................................................................................................ 191.000.00------------------------------------------1.00----------
.....................................GTCTTTTTCTCCTCAGAGGTTA............................................................................................................................................................................................... 221.000.00---------------------------------------------1.00-------
..........................................................................................................ATTGGAAATAAATATTCTA............................................................................................................................. 191.000.00--------------------1.00--------------------------------
......................................................................................................................................ATGGGTCAGGTTAGGCAT.................................................................................................. 1811.001.00------------------------1.00----------------------------
...................................................................................................................................................................................................CTGGCAGGAGCATCTGGT..................................... 1821.001.00----------------------------------------------1.00------
.................................................................................................................................CTCATATGGGTCAGGTTAGGCATCTCTT............................................................................................. 2811.001.00---------------------------------1.00-------------------