uc003ewq.1_intron_15_0_chr3_148778646

GAGAAGAGTAAGTTTCGCATGTCAGAATTGTCTAGCTCCCGCCCCAAAAGGTAAACTATTATGGTTTGATTATGTCATATGTTTATTTAGACTCTGTTTTCTTATGTGTAAAAGAGATAGAGGCTGGGCACGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCATGAGGTCAGGAGATTGAGACCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAATAGACA
.....................................................................................................................(((((((((((.((((((.....)))).))...)))))).))))).((.(((......)))...))...................................................................
....................................................................................................................117...................................................................187.............................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)

DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR207116(GSM721078)
Nuclear RNA. (cell line)

SRR189784

SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)

SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)

SRR038859(GSM458542)
MM386. (cell line)

DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)

SRR553576(SRX182782)
source: Testis. (testes)

SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)

GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR343334

SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)

SRR037936(GSM510474)
293cand1. (cell line)

DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR029129(GSM416758)
SW480. (cell line)

SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)

DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)

SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)

SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)

SRR040036(GSM532921)
G243N. (cervix)

GSM956925PAZD5

SRR189782

SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)

SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)

DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)

GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)

SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)

GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)

SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)

SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)

SRR038862(GSM458545)
MM472. (cell line)

SRR037944(GSM510482)
293DcrTN_cand5. (cell line)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

.........................................................................................................................GGCTGGGCACGGTGGCTCACACTTT........................................................................................................

8.00

0.00

1.00

2.00

1.00

................................................................................................................................................................TGGGAGGCCGAGGCGGGCGGGGC...................................................................

5.00

0.00

4.00

1.00

...............................................................................................................................................................TTGGGAGGCCGAGGCGGGCGGGGC...................................................................

5.00

0.00

3.00

2.00

.........................................................................................................................GGCTGGGCACGGTGGCTCACACTTTT.......................................................................................................

4.00

0.00

3.00

1.00

...........................................................................................................GTAAAAGAGATAGAGGCTGGGCACG......................................................................................................................

3.00

...................................................................................................................GATAGAGGCTGGGCAGAA.....................................................................................................................

3.00

0.00

3.00

.............................................................................................................................................................................CGGGCGGATCATGAGGTCAGGAGATTAAA................................................

2.00

0.00

2.00

..............................................................................................................................................................TTTGGGAGGCCGAGGCGGGCGGGGC...................................................................

2.00

0.00

2.00

.........................................................................................................................................................AGCACTTTGGGAGGCCGAGGCGGGCGGGGC...................................................................

2.00

0.00

2.00

............................................................................................................................................................ACTTTGGGAGGCCGAGGCGGGCGGGGG...................................................................

2.00

0.00

2.00

................................................................................................................................................................TGGGAGGCCGAGGCGGGCGGGGCT..................................................................

2.00

0.00

2.00

............................................................................................................................................................ACTTTGGGAGGCCGAGGCGGGCGGGGC...................................................................

2.00

0.00

2.00

.....................................................................................................................TAGAGGCTGGGCACGGTGGCTCACACCTACA......................................................................................................

2.00

0.00

2.00

...............................................................................................................................................................................................AGGAGATTGAGACCATCCTGGCTAACACAG.............................

1.00

.......................................................................................................................................................................................................................ACACAGTGAAACCCCGTCCACT.............

1.00

0.00

1.00

......................................................................................................................................................................................CATGAGGTCAGGAGATTGAGACC.............................................

1.00

.....................TCAGAATTGTCTAGCTCCCGCCCCA............................................................................................................................................................................................................

1.00

.................................................................................................................................ACGGTGGCTCACACCTGTTCGG...................................................................................................

1.00

0.00

1.00

........................................................................................................................AGGCTGGGCACGGTGGCTCACACCGT........................................................................................................

1.00

0.00

1.00

..GAAGAGTAAGTTTCGCATGTCAGAATTGTCTAGCTCCCGCCCCAAAAGAAGT....................................................................................................................................................................................................

1.00

0.00

1.00

........................................................................................................................................................................................TGAGGTCAGGAGATTGAGACCATCCTCCCA....................................

1.00

0.00

1.00

....................................................................................................................................................................................................ATTGAGACCATCCTGGCTAACACTGCG...........................

1.00

0.00

1.00

.....................................................................................................................TAGAGGCTGGGCACGGTGGCTCAA.............................................................................................................

1.00

0.00

1.00

...............................................................................................................................................................................................AGGAGATTGAGACCATCCGTCC.....................................

1.00

0.00

1.00

..........................................................................................................................................................................AGGCGGGCGGATCATGAAGCC...........................................................

1.00

0.00

1.00

...............................................................................................................................................................TTGGGAGGCCGAGGCGGGCGGAGGAC.................................................................

1.00

0.00

1.00

.........AAGTTTCGCATGTCAG.................................................................................................................................................................................................................................

1.00

..............TCGCATGTCAGAATTGTCTAGCTCCCGC................................................................................................................................................................................................................

1.00

.......................................................................................................................................................................................ATGAGGTCAGGAGATTGAGACCATCCCGC......................................

1.00

0.00

1.00

.................................................................................................................................................................GGGAGGCCGAGGCGGGCGGGTCC..................................................................

1.00

0.00

1.00

....................GTCAGAATTGTCTAGCTCC...................................................................................................................................................................................................................

1.00

........................................................................................................................AGGCTGGGCACGGTGGCTCACACCAGGA......................................................................................................

1.00

0.00

1.00

..........................................................................................................................................................................AGGCGGGCGGATCATGAGGTCAGGAGCCCA..................................................

1.00

0.00

1.00

........................................................................................................................................................................................TGAGGTCAGGAGATTGAGACCATCCGGTG.....................................

1.00

0.00

1.00

........................................................................................................................................................................................TGAGGTCAGGAGATTGAGACCATCCTGGCACGG.................................

1.00

0.00

1.00

.................................................................................................................................................................................CGGATCATGAGGTCAGGAGATTGAGACC.............................................

1.00

.................................................................................................................................................................GGGAGGCCGAGGCGGGCGGGTCA..................................................................

1.00

0.00

1.00

.................................................................................................................................................................GGGAGGCCGAGGCGGGCGGG.....................................................................

1.00

0.00

1.00

....................................................................................................................................................................................ATCATGAGGTCAGGAGATTGAGA...............................................

1.00

........................................................................................................................AGGCTGGGCACGGTGGCTCACACCCGG.......................................................................................................

1.00

0.00

1.00

...........................................................................CATATGTTTATTTAGACTCTGTTTTCTT...................................................................................................................................................

1.00

.................................................................................................................................................................................................GAGATTGAGACCATCCTGTAA....................................

1.00

0.00

1.00

................................................................................................................................................................TGGGAGGCCGAGGCGGGCGGGGGT..................................................................

1.00

0.00

1.00

.......................................................................................................................................................................................ATGAGGTCAGGAGATTTT.................................................

1.00

0.00

1.00

.......GTAAGTTTCGCATGTCAGA................................................................................................................................................................................................................................

1.00

.....................................................................................................................................................................................................TTGAGACCATCCTGGCTAACGGCG.............................

1.00

0.00

1.00

........................................................................................................................AGGCTGGGCACGGTGGCTCACACCCACA......................................................................................................

1.00

0.00

1.00

................................................................................................................................................................................................GGAGATTGAGACCATCCTGGCTAAAATA..............................

1.00

0.00

1.00

............................................................................................................................................................................................GTCAGGAGATTGAGACCGTC..........................................

1.00

0.00

1.00

...............................................................................................................................................................TTGGGAGGCCGAGGCGGGCGGGTA...................................................................

1.00

0.00

1.00

....................................................................................................................ATAGAGGCTGGGCACGGT....................................................................................................................

1.00

...........................................................................................................................................................CACTTTGGGAGGCCGAGGCGGGCGGTCC...................................................................

1.00

0.00

1.00

...................................................................................................................................................................................GATCATGAGGTCAGGAGATTGAGA...............................................

1.00

..................................................................................................................................................................................GGATCATGAGGTCAGGAGATTGAGACGAA...........................................

1.00

0.00

1.00

.................................................................................................................................................................................................................TGGCTAACACAGTGAAACCCCGTCCCTG.............

1.00

0.00

1.00

.......................................................................................................................................................................................ATGAGGTCAGGAGATTGAG................................................

1.00

...................................................................................................................................................................................GATCATGAGGTCAGGAGATTGAGACC.............................................

1.00

....................................................................................................................................................................AGGCCGAGGCGGGCGGAGGAC.................................................................

1.00

0.00

1.00

..............................................................................................................................................................TTTGGGAGGCCGAGGCGGGCGGG.....................................................................

1.00

0.00

1.00

................................................................................................................................................................TGGGAGGCCGAGGCGGGCGGAGAGG.................................................................

1.00

0.00

1.00

........................................................................................................................................................................................TGAGGTCAGGAGATTGAGACCATCCCGGA.....................................

1.00

0.00

1.00

...............................................................................................................................................................TTGGGAGGCCGAGGCGGGCGGGTCC..................................................................

1.00

0.00

1.00

..............................................................................................................................................................TTTGGGAGGCCGAGGCGGGCGGGGCC..................................................................

1.00

0.00

1.00

......................................................................................................................................................................................................................AACACAGTGAAACCCCGTCTTTA.............

1.00

0.00

1.00

.....................................................................................................................................................................................TCATGAGGTCAGGAGATTGAGA...............................................

1.00

.............................................................................................................................................................................CGGGCGGATCATGAGGTCACGGG......................................................

1.00

0.00

1.00

.....................TCAGAATTGTCTAGCTCCCGCCC..............................................................................................................................................................................................................

1.00

......................................................................................................................AGAGGCTGGGCACGGTGGCTCACACCCG........................................................................................................

1.00

0.00

1.00

................................................................................................................................................................TGGGAGGCCGAGGCGGGCGGGGCC..................................................................

1.00

0.00

1.00

.............................................................................................................................................................CTTTGGGAGGCCGAGGCGGGCGGGGC...................................................................

1.00

0.00

1.00