uc003evz.3_intron_1_0_chr3_146234955

TCTGAAATATAATTTCTCCGTACAATGAAACAGTTTTTTTCATATATCTATAAATAGATACAGGAGCCTCCAGTTATCTAATGAGGGTTACATATGGTGCATAATTTTAATACCATATTTGTTTCATCTTACTTCAAATTTGAAAGTACTTTTGCTATAAGTTTCCTAAAAGTATTTAATACTTTTTTTTTTCAATTTAGATTAAATCTCTTGATGAACAGTGTGTGGTTGGCAAAATTTCCAAGCACTG .....................................................................................................................................((.((.(((((((.((((.......)))).....((((((((...))))))))..))))))).)).))................................................. ....................................................................................................................................133......................................................................206..........................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189782	SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver)	SRR189784	SRR330880(SRX091718) tissue: skin psoriatic involveddisease state:. (skin)	SRR039620(GSM531983) HBV(+) Adjacent Tissue Sample 2. (liver)	SRR040008(GSM532893) G727N. (cervix)	SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin)	GSM450599(GSM450599) miRNA sequencing raw reads from post-mortem s. (brain)	SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.....................................................................................................................................................................................CTTTTTTTTTTCAATTTCTAG................................................	21		31.00	0.00	16.00	10.00	4.00	1.00	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................................ACTTTTTTTTTTCAATTTATAG................................................	22		5.00	0.00	3.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................................ACTTTTTTTTTTCAATCAAG..................................................	20		2.00	0.00	-	-	-	-	1.00	-	1.00	-	-	-	-	-	-	-
....................................................................................................................................................................................ACTTTTTTTTTTCAATTTAAG.................................................	21		2.00	0.00	-	-	-	2.00	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................................................................GATGAACAGTGTGTGGTTGACAA...............	23		2.00	0.00	-	-	-	-	-	2.00	-	-	-	-	-	-	-	-
............................................................................................................................................................................TATTTAATACTTTTTTTTTAAG........................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................TAATACTTTTTTTTTTCACT......................................................	20		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00
................................................................................................................................................................................TAATACTTTTTTTTTTACTG......................................................	20		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................................ACTTTTTTTTTTCAATTTATAA................................................	22		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................................................AAATCTCTTGATGAACAGTGTGTGGTTGGC.................	30	1	1.00	1.00	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-
....................................................................................................................................................................................ACTTTTTTTTTTCAATTTTAG.................................................	21		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................................................................CAGTGTGTGGTTGGCAAA..............	18	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-
..................................................................................................................................................................................ATACTTTTTTTTTTCAATCTG...................................................	21		1.00	0.00	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-
.....................................................................................................................................................................................CTTTTTTTTTTCAATTTCTTG................................................	21		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................................................................................................................ATGAACAGTGTGTGGTTGGCA................	21	1	1.00	1.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
.........................................................................................................................................ATTTGAAAGTACTTTACA...............................................................................................	18		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-
..............................................TCTATAAATAGATACG............................................................................................................................................................................................	16		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................................ACTTTTTTTTTTCAATTTTTTG................................................	22		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................TAATACTTTTTTTTTTCAAAT.....................................................	21		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
......................................................................................................................................................................................................................................GGCAAAATTTCCAAGATCA.	19		1.00	0.00	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-
...................................................................................................................................................................................TACTTTTTTTTTTCAATTTTAG.................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................TTTGTTTCATCTTACTTCA..................................................................................................................	19	1	1.00	1.00	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-
..................................................................................................................................................................................ATACTTTTTTTTTTCAATCCG...................................................	21		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................................ACTTTTTTTTTTCAATCAG...................................................	19		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................TAATTTTAATACCATATT...................................................................................................................................	18	3	0.67	0.67	-	-	0.33	0.33	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................TAATACTTTTTTTTTTCAAT......................................................	20	3	0.33	0.33	-	-	0.33	-	-	-	-	-	-	-	-	-	-	-

TCTGAAATATAATTTCTCCGTACAATGAAACAGTTTTTTTCATATATCTATAAATAGATACAGGAGCCTCCAGTTATCTAATGAGGGTTACATATGGTGCATAATTTTAATACCATATTTGTTTCATCTTACTTCAAATTTGAAAGTACTTTTGCTATAAGTTTCCTAAAAGTATTTAATACTTTTTTTTTTCAATTTAGATTAAATCTCTTGATGAACAGTGTGTGGTTGGCAAAATTTCCAAGCACTG
.....................................................................................................................................((.((.(((((((.((((.......)))).....((((((((...))))))))..))))))).)).)).................................................
....................................................................................................................................133......................................................................206..........................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189782

SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)

SRR189784

SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)

SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)

SRR040008(GSM532893)
G727N. (cervix)

SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)

GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

.....................................................................................................................................................................................CTTTTTTTTTTCAATTTCTAG................................................

31.00

0.00

16.00

10.00

4.00

1.00

....................................................................................................................................................................................ACTTTTTTTTTTCAATTTATAG................................................

5.00

0.00

3.00

2.00

....................................................................................................................................................................................ACTTTTTTTTTTCAATCAAG..................................................

2.00

0.00

1.00

....................................................................................................................................................................................ACTTTTTTTTTTCAATTTAAG.................................................

2.00

0.00

2.00

....................................................................................................................................................................................................................GATGAACAGTGTGTGGTTGACAA...............

2.00

0.00

2.00

............................................................................................................................................................................TATTTAATACTTTTTTTTTAAG........................................................

1.00

0.00

1.00

................................................................................................................................................................................TAATACTTTTTTTTTTCACT......................................................

1.00

0.00

1.00

................................................................................................................................................................................TAATACTTTTTTTTTTACTG......................................................

1.00

0.00

1.00

....................................................................................................................................................................................ACTTTTTTTTTTCAATTTATAA................................................

1.00

0.00

1.00

...........................................................................................................................................................................................................AAATCTCTTGATGAACAGTGTGTGGTTGGC.................

1.00

....................................................................................................................................................................................ACTTTTTTTTTTCAATTTTAG.................................................

1.00

0.00

1.00

..........................................................................................................................................................................................................................CAGTGTGTGGTTGGCAAA..............

1.00

..................................................................................................................................................................................ATACTTTTTTTTTTCAATCTG...................................................

1.00

0.00

1.00

0.00

1.00

.....................................................................................................................................................................................................................ATGAACAGTGTGTGGTTGGCA................

1.00

.........................................................................................................................................ATTTGAAAGTACTTTACA...............................................................................................

1.00

0.00

1.00

..............................................TCTATAAATAGATACG............................................................................................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................................ACTTTTTTTTTTCAATTTTTTG................................................

1.00

0.00

1.00

................................................................................................................................................................................TAATACTTTTTTTTTTCAAAT.....................................................

1.00

0.00

1.00

......................................................................................................................................................................................................................................GGCAAAATTTCCAAGATCA.

1.00

0.00

1.00

...................................................................................................................................................................................TACTTTTTTTTTTCAATTTTAG.................................................

1.00

0.00

1.00

.....................................................................................................................TTTGTTTCATCTTACTTCA..................................................................................................................

1.00

..................................................................................................................................................................................ATACTTTTTTTTTTCAATCCG...................................................

1.00

0.00

1.00

....................................................................................................................................................................................ACTTTTTTTTTTCAATCAG...................................................

1.00

0.00

1.00

.....................................................................................................TAATTTTAATACCATATT...................................................................................................................................

0.67

0.33

................................................................................................................................................................................TAATACTTTTTTTTTTCAAT......................................................

0.33