ID: uc003evq.1_intron_5_0_chr3_145794683_r.5p
GENE: PLOD2(4)
chr3:145795449-145795698-


(5)
CELL-LINE
(1)
CERVIX
(1)
HEART
(2)
OTHER

Sense strand
AAAAAGACTCCCCTACTCCGGAAACATTCCAAATGCTCAGCCCCCCAAAGGTGTTATTTTTACTTATTTTATTTATTTTTGTTTATTTAATATTTGATATAGTATATTGCCTAGTAGTAAAGTTTCTTTAAGGGCCTTATTTGCATTTAGCTTGGTAAAATGTTGATTTTCATCAGTCATCTGTGTGTTTGCGTGTTTTGTGTGACTTGGGCATGGGTCTTGTGTGATAGTCAACTCTTGGTTCTTTGAG
............................................................((((....(((..((((...........))))..)))...))))..(((((.(((..(((((...)))))...((.......)).....))).))))).((((((((....))))).)))......................................................................
........................................................57..........................................................................................................................181...................................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR040043(GSM532928)
G428T. (cervix)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR189785
.............................................................ACTTATTTTATTTATTTTTTCG.......................................................................................................................................................................2247.000.0025.0018.001.003.00-----
............................................................TACTTATTTTATTTATTTTTTCG.......................................................................................................................................................................2316.000.007.006.003.00------
...........................................................TTACTTATTTTATTTATTTTCTTG.......................................................................................................................................................................242.000.00--2.00------
............................................................TACTTATTTTATTTATTTTTTCA.......................................................................................................................................................................232.000.00-2.00-------
..............................................................CTTATTTTATTTATTTTTG.........................................................................................................................................................................1991.111.110.560.220.110.11----0.11
........................................................TTTTTACTTATTTTATTCTTG.............................................................................................................................................................................211.000.00---1.00-----
.....................................................TTATTTTTACTTATTTTATTCTTG.............................................................................................................................................................................241.000.00--1.00------
........................................................................TTATTTTTGTTTATTTCCGT..............................................................................................................................................................201.000.00------1.00--
............................................................TACTTATTTTATTTATTTTTCCG.......................................................................................................................................................................231.000.00---1.00-----
............................................................TACTTATTTTATTTATTTTTTTCG......................................................................................................................................................................241.000.00---1.00-----
.............................................................ACTTATTTTATTTATTTTTTATG......................................................................................................................................................................231.000.001.00--------
.............................................................................................................................................................AAATGTTGATTTTCATTATG.........................................................................201.000.00----1.00----
..............................................................CTTATTTTATTTATTTTTTATG......................................................................................................................................................................221.000.001.00--------
............................................................TACTTATTTTATTTATTTTTTAG.......................................................................................................................................................................231.000.00--1.00------
............................................................TACTTATTTTATTTATTTCTCT........................................................................................................................................................................221.000.00---1.00-----
...............................................................................................GATATAGTATATTGCAACT........................................................................................................................................191.000.00----1.00----
............................................................TACTTATTTTATTTATTTTCA.........................................................................................................................................................................211.000.00---1.00-----
..............................................................................................TGATATAGTATATTGTATA.........................................................................................................................................191.000.00-----1.00---
.....................................................TTATTTTTACTTATTTTCG..................................................................................................................................................................................191.000.00--1.00------
........................................................TTTTTACTTATTTTATTTATTTTTG.........................................................................................................................................................................2530.330.330.33--------
.......................................................................................................................................................................................................GTGTGACTTGGGCATG...................................1670.140.14-------0.14-

Antisense strand
AAAAAGACTCCCCTACTCCGGAAACATTCCAAATGCTCAGCCCCCCAAAGGTGTTATTTTTACTTATTTTATTTATTTTTGTTTATTTAATATTTGATATAGTATATTGCCTAGTAGTAAAGTTTCTTTAAGGGCCTTATTTGCATTTAGCTTGGTAAAATGTTGATTTTCATCAGTCATCTGTGTGTTTGCGTGTTTTGTGTGACTTGGGCATGGGTCTTGTGTGATAGTCAACTCTTGGTTCTTTGAG
............................................................((((....(((..((((...........))))..)))...))))..(((((.(((..(((((...)))))...((.......)).....))).))))).((((((((....))))).)))......................................................................
........................................................57..........................................................................................................................181...................................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR040043(GSM532928)
G428T. (cervix)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR189785
.........GTTTCCGGAGTAGGGG................................................................................................................................................................................................................................. 1620.500.50----0.50----