ID: uc003evb.2_intron_8_0_chr3_142521187_f.5p
GENE: (9)
chr3:142521137-142521386+


(1)
B-CELL
(1)
BRAIN
(8)
CELL-LINE
(4)
HEART
(1)
HELA
(1)
OTHER
(4)
SKIN

Sense strand
GACTGTGTAGGCATCTTCTGTGAACAGCAAAGCAATGATACCTTCCATTCGTGAGTATCTTTTAAATGTTTTAGTAAATATATTTGTCTTTTTTTTTTTTACCATCTTCTATATGAATTAGTATCTATAGAAATGGAACTTCACATTTTAAGAAATTCCTTAGTAATGTTCATAAACTTTAATAAATACTTATTTTTCATGAATCACTATAGTCATCTTTACATACAGCATCTTAAATAGTGGGTCCAAG
..................................................(((((.......(((((((.((....)).)))))))...........)))))....................................................................................................................................................
..................................................51............................................................113.......................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
......................................................................................TCTTTTTTTTTTTTACCATCTTG.............................................................................................................................................2318.000.0010.005.001.00-2.00---------------
.......................................................................................CTTTTTTTTTTTTACCATCTTG.............................................................................................................................................22116.001.005.007.004.00-----------------
......................................................................................TCTTTTTTTTTTTTACCATG................................................................................................................................................204.000.002.002.00------------------
.......................................................................................CTTTTTTTTTTTTACCATCG...............................................................................................................................................203.000.00-2.00--1.00---------------
.....TGTAGGCATCTTCTGTGAACAGCAAAGCAATG.....................................................................................................................................................................................................................3212.002.00--------2.00-----------
........AGGCATCTTCTGTGAACAGCAAAGCAATGA....................................................................................................................................................................................................................3012.002.00-----------2.00--------
......................................................................................TCTTTTTTTTTTTTACCATCTTCTATATT.......................................................................................................................................292.000.00-1.001.00-----------------
..........................................................................................TTTTTTTTTTACCATCTGG.............................................................................................................................................191.000.001.00-------------------
....GTGTAGGCATCTTCTGTGAACAGCAAAGCA........................................................................................................................................................................................................................3011.001.00------1.00-------------
.................................................................................ATTTGTCTTTTTTTTTTTTATTGA.................................................................................................................................................241.000.00---1.00----------------
.............TCTTCTGTGAACAGCAAAGCATGA.....................................................................................................................................................................................................................241.000.00-------------1.00------
........................................................................................TTTTTTTTTTTTACCATCATA.............................................................................................................................................211.000.00--1.00-----------------
........AGGCATCTTCTGTGAACAGCAAAGC.........................................................................................................................................................................................................................2511.001.00-------1.00------------
........................................................ATCTTTTAAATGTTTTACT...............................................................................................................................................................................191.000.00------------1.00-------
....................................................................................TGTCTTTTTTTTTTTTACTCCC................................................................................................................................................221.000.00---1.00----------------
........................................................................................TTTTTTTTTTTTACCATCAAAG............................................................................................................................................221.000.00--1.00-----------------
......................................................................................TCTTTTTTTTTTTTACCCACC...............................................................................................................................................211.000.00----------1.00---------
..CTGTGTAGGCATCTTCTGTGAACAGCA.............................................................................................................................................................................................................................2711.001.00----------------1.00---
......................................................................................TCTTTTTTTTTTTTACCATCTTCTATATG.......................................................................................................................................2911.001.00-1.00------------------
....................................................................................TGTCTTTTTTTTTTTTACCAGGG...............................................................................................................................................231.000.00---1.00----------------
.................................................................................ATTTGTCTTTTTTTTTTTTACGGAC................................................................................................................................................251.000.00---1.00----------------
.ACTGTGTAGGCATCTTCTGT.....................................................................................................................................................................................................................................2011.001.00-----------------1.00--
...............TTCTGTGAACAGCAAAGCAATGATACC................................................................................................................................................................................................................2711.001.00-------1.00------------
........................................................................................................................................................................TTCATAAACTTTAATAAATACTTATTTTTCACA.................................................331.000.00----1.00---------------
.......................................................................................CTTTTTTTTTTTTACCATCTT..............................................................................................................................................2111.001.001.00-------------------
...................GTGAACAGCAAAGCAATGATACCTTC.............................................................................................................................................................................................................2611.001.00------1.00-------------
....................TGAACAGCAAAGCAATGATACC................................................................................................................................................................................................................2211.001.00---------------1.00----
..................TGTGAACAGCAAAGCAATGATAC.................................................................................................................................................................................................................2311.001.00------1.00-------------
......................................................................................TCTTTTTTTTTTTTACCAATT...............................................................................................................................................211.000.001.00-------------------
...................GTGAACAGCAAAGCAATGATACCTTCC............................................................................................................................................................................................................2711.001.00---------1.00----------
.......................................................................................CTTTTTTTTTTTTACGTTC................................................................................................................................................191.000.001.00-------------------
.........................................................................................TTTTTTTTTTTACCATCTCG.............................................................................................................................................201.000.00----1.00---------------
......................................................................................TCTTTTTTTTTTTTACCCAAG...............................................................................................................................................211.000.001.00-------------------
.......................................................................................CTTTTTTTTTTTTACCATCTTA.............................................................................................................................................2211.001.001.00-------------------
.......................................................................................CTTTTTTTTTTTTACCATTTTG.............................................................................................................................................221.000.00-1.00------------------
.................................................................................ATTTGTCTTTTTTTTTTGCC.....................................................................................................................................................201.000.00---1.00----------------
.................................................................................ATTTGTCTTTTTTTTTTTGG.....................................................................................................................................................201.000.00---1.00----------------
..................TGTGAACAGCAAAGCAATGA....................................................................................................................................................................................................................2011.001.00---------1.00----------
.......................................................................................CTTTTTTTTTTTTACCATCTTGTG...........................................................................................................................................2411.001.00----------1.00---------
.......................................................................................CTTTTTTTTTTTTACCATCTTT.............................................................................................................................................2211.001.00-1.00------------------
.......TAGGCATCTTCTGTGAAC.................................................................................................................................................................................................................................1811.001.00--------------1.00-----
........................................................................................TTTTTTTTTTTTACCATCTGG.............................................................................................................................................211.000.00--1.00-----------------
.......................................................................................CTTTTTTTTTTTTACCATCTGG.............................................................................................................................................2240.250.250.25-------------------
.......................................................................................CTTTTTTTTTTTTACCATCT...............................................................................................................................................2040.250.25-0.25------------------

Antisense strand
GACTGTGTAGGCATCTTCTGTGAACAGCAAAGCAATGATACCTTCCATTCGTGAGTATCTTTTAAATGTTTTAGTAAATATATTTGTCTTTTTTTTTTTTACCATCTTCTATATGAATTAGTATCTATAGAAATGGAACTTCACATTTTAAGAAATTCCTTAGTAATGTTCATAAACTTTAATAAATACTTATTTTTCATGAATCACTATAGTCATCTTTACATACAGCATCTTAAATAGTGGGTCCAAG
..................................................(((((.......(((((((.((....)).)))))))...........)))))....................................................................................................................................................
..................................................51............................................................113.......................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
.............................................................................................................................................................................................................................ATTTAAGATGCTGTATG............ 1733.333.33-----3.00-------------0.33
.............................................................................................................................................................................................................ACTATAGTCATCTTTAATT.......................... 191.000.00------------------1.00-
.....................................................................TTTAGTAAATATATTGATA.................................................................................................................................................................. 191.000.00------------1.00-------