ID: uc003euz.2_intron_0_0_chr3_142342405_f.5p
GENE: (1)
chr3:142342355-142342604+


(1)
AGO2.ip
(1)
B-CELL
(4)
BREAST
(1)
CELL-LINE
(1)
HEART
(2)
OTHER
(28)
SKIN
(1)
TESTES

Sense strand
ATTGTTTTTCTGGACTTCCAAATCTCAAGTGATAAGACCAGCAGAAGCAGGTATACAAAAATTTATCTCTGTCAATAGCAGTAAGACAGCCTCGGATTCCAGGCTGCTTTTTCATATAATTGTTAAATTGAGATAAACACCCTCATAGTATTTCTTTTTTAAATGCATTCTTGCTTTGGGACTCTAGATGGCTTTGCATAATCAATGTAAATAGGAACCTTGGTGTGAAGATAATATAATTCTTAATTAT
..................................................................................................................................................(((...(((.(((((((.(((....))))))))))....)))..))).........................................................
.....................................................................................................................................134.........................................................194......................................................
SizePerfect hitTotal NormPerfect NormSRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR189783SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
..............................................................................................................................................................................TTTGGGACTCTAGATA............................................................1616.000.002.001.003.001.00--1.001.00------1.001.00--------1.00-----1.001.00---1.001.00-
.............................................................................................................................................................................CTTTGGGACTCTAGATA............................................................1710.000.00---2.00--1.00-1.00--1.001.001.00-1.00---------1.001.00-----------
............................................................................................................................................................................GCTTTGGGACTCTAGATA............................................................1819.001.002.00----1.00--1.00----1.00-----1.00--1.001.00--------1.00-----
..............................................................................................................................................................................TTTGGGACTCTAGATAACC.........................................................195.000.00---------1.00----1.00------1.00-----------1.001.00---
............................................................................................................................................................................GCTTTGGGACTCTAGATAAC..........................................................2012.001.00-----1.00-----1.00--------------------------
............................................................................................................................................................................GCTTTGGGACTCTAGATAACC.........................................................2112.001.00-------1.00------------1.00-----------------
.............................................................................................................................................................................CTTTGGGACTCTAGATAAC..........................................................192.000.00----------------1.00-1.00-------------------
............................................................................................................................................................................GCTTTGGGACTCTAGAT.............................................................1711.001.00----1.00---------------------------------
..........................................................................................................................................ACCCTCATAGTATTTCTACGA...........................................................................................211.000.00----------------------------1.00---------
............................................................................................................................................................................GCTTTGGGACTCTAGA..............................................................1611.001.00------------1.00-------------------------
.............................................................................................................................................................................CTTTGGGACTCTAGATAACC.........................................................201.000.00---------1.00----------------------------
........................................................................................................................................................................TCTTGCTTTGGGACTCTAGATGGCTCTGC.....................................................291.000.00-----------------------------1.00--------
.............................TGATAAGACCAGCAGAAGCAGGTATACA.................................................................................................................................................................................................2811.001.00---------------------------1.00----------
..............................................................................................................................................................................TTTGGGACTCTAGATAAC..........................................................181.000.00-1.00------------------------------------
...........................................................................................TCGGATTCCAGGCTGCA..............................................................................................................................................171.000.00-1.00------------------------------------
............................................................................................................................................................................GCTTTGGGACTCTAG...............................................................1550.200.20----------------0.20---------------------

Antisense strand
ATTGTTTTTCTGGACTTCCAAATCTCAAGTGATAAGACCAGCAGAAGCAGGTATACAAAAATTTATCTCTGTCAATAGCAGTAAGACAGCCTCGGATTCCAGGCTGCTTTTTCATATAATTGTTAAATTGAGATAAACACCCTCATAGTATTTCTTTTTTAAATGCATTCTTGCTTTGGGACTCTAGATGGCTTTGCATAATCAATGTAAATAGGAACCTTGGTGTGAAGATAATATAATTCTTAATTAT
..................................................................................................................................................(((...(((.(((((((.(((....))))))))))....)))..))).........................................................
.....................................................................................................................................134.........................................................194......................................................
SizePerfect hitTotal NormPerfect NormSRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR189783SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
.............................................................TACTGCTATTGACAGAGATAAA....................................................................................................................................................................... 2212.002.00----2.00---------------------------------
.......................................AGCAGAAGCAGGTATACTGAT.............................................................................................................................................................................................. 211.000.00----------1.00---------------------------
.....................................................................TGTCAATAGCAGTAACGA................................................................................................................................................................... 181.000.00----------1.00---------------------------
.......................................AGCAGAAGCAGGTATACT................................................................................................................................................................................................. 181.000.00-----------------1.00--------------------
..........................................................................................................................................................AAGAATGCATTTAAAAAA.............................................................................. 1850.200.20-------------------------------------0.20