ID: uc003eus.2_intron_30_0_chr3_142137452_r
GENE: (11)
chr3:142137402-142137706-


(1)
AGO1.ip 		(9)
B-CELL 		(1)
BRAIN 		(21)
BREAST 		(27)
CELL-LINE 		(7)
CERVIX 		(2)
FIBROBLAST 		(6)
HEART 		(2)
HELA 		(1)
KIDNEY 		(6)
LIVER 		(1)
OTHER 		(54)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
GTGTTGGACTGCTTTAGACAAAAATGAAGGCGAAATGATAACTTCTAAGGGTAAGTATGAAGTATGTGTTTTGATATGTTACTACTTTGACAGGATAATTGTTATACCTTTTATTTATTATTACTAATTTTGGGTGGAACAGATTTCTGTGATAGCATATAAGCATCAACTTGGATATGCATTTATCAAATCATTAGGTGGAAAAACAGGCTATTCATAATTGTCAGTCACTATCTTTCTGACTTTTTTCCCCAGATAATTTAGAAGATGAGACTGAAGATGATGACCTATTTGAAACTGAGTTT
..................................................................................................................................((((.((((..((..(((((....((((((...((......)).)))))).((((((.........))))))...)))))....))......(((((...........)))))...))))))))...................................................
...........................................................................................................108................................................................................................................................................255................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR040015(GSM532900)
G623T. (cervix)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553575(SRX182781)
source: Kidney. (Kidney)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR038858(GSM458541)
MEL202. (cell line)		SRR040007(GSM532892)
G601T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029130(GSM416759)
DLD2. (cell line)		SRR191423(GSM715533)
137genomic small RNA (size selected RNA from . (breast)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR040018(GSM532903)
G701N. (cervix)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR191536(GSM715646)
183genomic small RNA (size selected RNA from . (breast)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR040019(GSM532904)
G701T. (cervix)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029128(GSM416757)
H520. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR040025(GSM532910)
G613T. (cervix)		SRR040022(GSM532907)
G575N. (cervix)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR343335SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)		SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)		SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
..........................................................................................................................................................................................................................................CTTTCTGACTTTTTTCCCCAGA.................................................221213.00213.0058.0025.00--6.002.004.005.00-3.001.00-1.004.004.003.00-3.001.002.00-3.002.002.00-4.001.004.002.001.00-1.002.001.001.00--1.00-1.001.00-1.001.001.002.001.001.001.002.00-1.001.001.00-2.001.001.002.001.002.002.001.002.00-2.002.00--2.001.00--2.00-1.002.001.00-2.001.001.002.001.00----1.00--1.00-1.001.00---1.00--1.001.001.00--1.00-1.00-----1.00---1.00--------1.001.001.00-------1.001.00-
..........................................................................................................................................................................................................................................CTTTCTGACTTTTTTCCCCAG..................................................21158.0058.006.0010.00--1.004.002.002.00--1.00-2.001.001.002.002.001.00-2.00---1.00----1.00-----2.00---2.001.00--2.00----1.00--------1.00--1.00-------1.00-------------------1.00--------1.001.00---------1.00----1.00--1.00-1.00--------1.00-------------
.........................................................................................................................................................................................................................................TCTTTCTGACTTTTTTCCCCAGA.................................................23146.0046.0017.001.00--1.001.001.00--2.00--1.00--------1.001.001.00-----1.00--1.001.00--1.002.00-----1.00-1.00--1.00--1.00-----1.00----1.00-------1.00---------1.001.00------------------1.00----1.00-----1.00------------1.00---------------
......................................................................................................................................................................................................................................................................AGAAGATGAGACTGAAGATATC.....................2217.002.00--------7.00-----------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................TCTTTCTGACTTTTTTCCCCAG..................................................2216.006.00------------1.00---2.00-----------------------------1.00-------2.00-------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................CTTTCTGACTTTTTTCCCCAGAA................................................2315.00213.002.00-----------------1.00---------------------------------1.00--------------1.00------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................AGAAGATGAGACTGAAGATGATG....................2315.005.00--1.001.00-------2.00--------------------------------------------------------------------------------------------1.00-----------------------------------
...............................................................................................................................................................................................................................................................................GACTGAAGATGATGATGAG...............194.000.00--------------------------------------1.00--------------------------------------------------1.00--------------------------1.00--------1.00--------------
........................................................................................................................................................................................................................................ATCTTTCTGACTTTTTTCCCCAGA.................................................2414.004.001.00--------1.00-----------------------1.00--1.00-------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................AGAAGATGAGACTGAAGATGATGACC.................2613.003.00---3.00----------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................AGAAGATGAGACTGAAGATGATGATA.................2613.002.00---2.00--------------------------------------------------------------------------1.00-------------------------------------------------------------
.......................................................................................................................................................................................................................................................................GAAGATGAGACTGAAGATGA......................2013.003.00--1.00-----------------2.00-----------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................TATCTTTCTGACTTTTTTCC......................................................2022.502.50------------------------------2.50-------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................AGATGATGACCTATTTTGTC........202.000.00------------------------2.00-------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................TTTCTGACTTTTTTCCCCAGA.................................................2112.002.001.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................AGTCACTATCTTTCTGACTTTTTTCCCCAGA.................................................3112.002.00--------------------------------------------------------------------------2.00-----------------------------------------------------------------
...................................................................................................................................................................................................................................................................................GAAGATGATGACCTATTTGAAACT......2412.002.00-----------1.00------------------1.00-------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................TTAGAAGATGAGACTGAAGA.........................2012.002.00--2.00-----------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................GAAGATGAGACTGAAGATGATG....................2212.002.00----------2.00---------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................TAGAAGATGAGACTGAAGA.........................1912.002.00-----------1.00----------------------------------1.00---------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................TGAAGATGATGACCTATTT............1912.002.00--------------------2.00-----------------------------------------------------------------------------------------------------------------------
................................................................................................................ATTTATTATTACTAATTTTGG............................................................................................................................................................................2112.002.00--2.00-----------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................AGAAGATGAGACTGAAGAT........................1912.002.00--2.00-----------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................TGAAGATGATGACCTATTTGAAACTGAG...2812.002.00-----------------------------------2.00--------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................GAAGATGAGACTGAAGATGAT.....................2112.002.00--1.00-----------------------------------------------------------------------------------------------------------------------------------1.00-----
..........................................................................................................................................................................................................................................CTTTCTGACTTTTTTCCCCA...................................................2012.002.00------------------1.00------------------------------------------------------------------1.00------------------------------------------------------
......................................................................................................................................................................................................................................................................AGAAGATGAGACTGAAGATGATGA...................2412.002.00--1.00---------------------------------------------------------------------------1.00-------------------------------------------------------------
..........................................................................................................................................................................................................................................................................GATGAGACTGAAGATGATGAC..................2112.002.00-----------------------------------------------------------------------------1.00-------1.00------------------------------------------------------
..................................................................................................................................................................................GCATTTATCAAATCAAAAC............................................................................................................192.000.00--------------------------------------------------2.00-----------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................CTTTCTGACTTTTTTCCCCATA.................................................2212.002.00--------------------------------------------------------------------------------------------------------------------------1.001.00----------------
..........................................................................................................................................................................................................................................CTTTCTGACTTTTTTCCCCAGC.................................................2212.0058.00-----------------1.00--------------------------------------------------------------------------1.00-----------------------------------------------
..............................................................................................................................................................................................................................................................................AGACTGAAGATGATGACC.................1812.002.00-------------------------------1.00----------------------------------------------------------------------------------------1.00-------------------
.........................................................................................................................................................................................................................................................................AGATGAGACTGAAGATGA......................1812.002.00----------------------------------------------------------------1.00------1.00--------------------------------------------------------------------
.....................................................................................................TTATACCTTTTATTTATTATTACTAATTTTG.............................................................................................................................................................................3112.002.00-----------------------------------------------------------------------------------------------1.00--------------1.00-----------------------------
...........................................................................................................................................................................................................................................................................ATGAGACTGAAGATGATGAC..................2011.001.00----------------------------1.00---------------------------------------------------------------------------------------------------------------
...............................................................................................TAATTGTTATACCTTTTGG...............................................................................................................................................................................................191.000.00----------------------------------------1.00---------------------------------------------------------------------------------------------------
.........................................................................................................................................................AGCATATAAGCATCAACTGG....................................................................................................................................201.000.00----------------------------------------1.00---------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................TGAAGATGATGACCTATTTGAAACTGAGT..2911.001.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................ATAATTTAGAAGATGAGACTGAAG..........................2411.001.00------------------------------------------------1.00-------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................AAGATGAGACTGAAGATGATGACCTA...............2611.001.00--------------------------------------------1.00-----------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................TCTTTCTGACTTTTTGGGT.....................................................191.000.00-----------------------------------------------------1.00--------------------------------------------------------------------------------------
........................................................................................................TACCTTTTATTTATTACAC......................................................................................................................................................................................191.000.00--------------------------------------------------------------------------------------1.00-----------------------------------------------------
........................................................................................................................................................................................................................................................................AAGATGAGACTGAAGATGATGAC..................2311.001.00--------------------------------------------------------------------1.00-----------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTATCTTTCTGACTTTTTTCCCCAGA.................................................2911.001.00-------------------------------------------1.00------------------------------------------------------------------------------------------------
.........TGCTTTAGACAAAAATGAAGGC..................................................................................................................................................................................................................................................................................2211.001.00----------1.00---------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................CTTTCTGACTTTTTTCCACAG..................................................211.000.00-----------------------------------------------------------------------------------1.00--------------------------------------------------------
...........................................................................................................................................................................................................................................TTTCTGACTTTTTTCCCCAGT.................................................211.000.00---------------------------------------------------------------------------1.00----------------------------------------------------------------
........................................................................................................................................................................................................................................................................AAGATGAGACTGAAGATGATGACC.................2411.001.00-------------------------------1.00------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................TGAGACTGAAGATGATGACCTATTTG...........2611.001.00----------------1.00---------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................AGAAGATGAGACTGAAGATGAT.....................2211.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................ATGAGACTGAAGATGATG....................1821.001.00-------------------------------------------------------------------------------------------------------------------------------------1.00------
......................................................................................................................................................................................................................................................................AGAAGATGAGACTGAAGATGATGAC..................2511.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TAGCATATAAGCATCAACTTGGATATGCA............................................................................................................................2911.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................TCTGACTTTTTTCCCCAGA.................................................1911.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................ATTTTGGGTGGAACAGA..................................................................................................................................................................1711.001.00------------1.00-------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................TTTAGAAGATGAGACTGAAGATG.......................2311.001.00----------------------1.00---------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................GAAGATGATGACCTATTTGAAACTGAG...2711.001.00--------------------------1.00-----------------------------------------------------------------------------------------------------------------
.......ACTGCTTTAGACAAAAATGAAGGCGAAATG............................................................................................................................................................................................................................................................................3011.001.00-----------------------------1.00--------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................GATGAGACTGAAGATGAT.....................1811.001.00------------------------------------------------------------------------1.00-------------------------------------------------------------------
..........................................................................................................................................................................................................................................CTTTCTGACTTTTTTCCCCCG..................................................211.000.00------------------------------------------------------------------------------------------1.00-------------------------------------------------
......................................................................................................................................................................................................................................................................AGAAGATGAGACTGAAGATGATGACCTAT..............2911.001.00-----------------------------------1.00--------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................CTTTCTGACTTTTTTCCCCGGA.................................................221.000.00---------------------------------------------------------------------------------------------------------------------------------------1.00----
............................................................................................................................................................................................................................................................................TGAGACTGAAGATGATGACCT................2111.001.00--------------------------------------------------------------------1.00-----------------------------------------------------------------------
.....................................................................................................................................................................................................................................ACTATCTTTCTGACTTTTTTCCCCAGA.................................................2711.001.00--------------------------1.00-----------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................AGAAGATGAGACTGAAGATGATA....................2311.001.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................GAAGATGATGACCTATTTGAAACTGAGT..2811.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................AATTTAGAAGATGAGACTG.............................1911.001.00-----------1.00--------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................AAGATGAGACTGAAGATT.......................181.000.00-----------------------------------------1.00--------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................CTTTCTGACTTTTTTCCCAGA..................................................211.000.00----------1.00---------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................TTATTATTACTAATTTTTC............................................................................................................................................................................191.000.00------------------------------------------------------------------------------------1.00-------------------------------------------------------
..................................................................................................................................................................................................................................................................ATTTAGAAGATGAGACTGAA...........................2011.001.00-----------------------------------------1.00--------------------------------------------------------------------------------------------------
.....................................................................................................TTATACCTTTTATTTATTATTACTAATCTTG.............................................................................................................................................................................311.000.00------------------------------------------------------------------------------------1.00-------------------------------------------------------
...........................................................................................................................................................................................................................................TTTCTGACTTTTTTCCCCAGAA................................................2211.002.00-1.00------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................CTTTCTGACTTTTTTCCCCAGTA................................................2311.0058.00----------------------------------------------------------------------------------------------------------------------------------------1.00---
..................................................................................................................................................................................................................................................................................TGAAGATGATGACCTATTTGAAACT......2511.001.00---------------------------------------1.00----------------------------------------------------------------------------------------------------
..........................AAGGCGAAATGATAACTTCTA..................................................................................................................................................................................................................................................................2111.001.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TTATACCTTTTATTTATTATTACTAATTCCG.............................................................................................................................................................................311.000.00-------------------------------------------------------------------------------------------------------------------------------------------1.00
......................................................................................................................................................................................................................................................................AGAAGATGAGACTGAAGATGA......................2111.001.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................GATAATTTAGAAGATGAGACTGAAGATGA......................2911.001.00----------------------------------------------------------------1.00---------------------------------------------------------------------------
...........................AGGCGAAATGATAACTTCTAAGGAT.............................................................................................................................................................................................................................................................251.000.00-----------------------------------------------------------------------------------------------------------------------------------1.00--------
..............................................................................................................................................................................................................................................................................AGACTGAAGATGATGACCTATTTGAAA........2711.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------------
...TTGGACTGCTTTAGACAAAAATGAAGGCG.................................................................................................................................................................................................................................................................................2911.001.00--------------------------1.00-----------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................GATGAGACTGAAGATGATGA...................2011.001.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................TCTTTCTGACTTTTTTCCCCAGAA................................................2411.0046.001.00-------------------------------------------------------------------------------------------------------------------------------------------
..............................CGAAATGATAACTTCTAAGG...............................................................................................................................................................................................................................................................2011.001.00-------------------------------------------------1.00------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................GATGATGACCTATTTGAAACTGAG...2411.001.00------------------1.00-------------------------------------------------------------------------------------------------------------------------
....TGGACTGCTTTAGACAAAAATGAAGGCG.................................................................................................................................................................................................................................................................................2811.001.00------------------------------------------------------------------------------------------------------------------------------------1.00-------
............................................................................................................................................................................................................................................................................TGAGACTGAAGATGATGTT..................191.000.00------------------------------------------------------------------------1.00-------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................GATGAGACTGAAGATGATGACC.................2211.001.00------------------------------------1.00-------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................TAATTTAGAAGATGAGACTGAAGATGATGACC.................3211.001.00-------------------------------------------------------------------------------------------------------------1.00------------------------------
.......................................................................................................................................................................................................................................................................GAAGATGAGACTGAAGATGATGACC.................2511.001.00---------------------------------------------------------------------------------------------------1.00----------------------------------------
.....................................................................................................................................................................................................................................................................TAGAAGATGAGACTGAAGAT........................2011.001.00-----------------------------------------------------------------------1.00--------------------------------------------------------------------
................................................................................................................................TTTGGGTGGAACAGATTTCTGTGATAGC.....................................................................................................................................................2811.001.00---------1.00----------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................AGAAGATGAGACTGAAGATGATGT...................2411.005.00-----------1.00--------------------------------------------------------------------------------------------------------------------------------
...........................AGGCGAAATGATAACTTCTAAGGATA............................................................................................................................................................................................................................................................261.000.00-----------------------------1.00--------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................GAAGATGATGACCTATTTGAAACTG.....2511.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................GATGAGACTGAAGATGATG....................1911.001.00-----------------------------------------1.00--------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................GAGACTGAAGATGATGACCTATTTGAA.........2711.001.00--------------------------------------------1.00-----------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................ATAATTTAGAAGATGAGACTGA............................2211.001.00-----------------------------------------------------------------------------------------------------------------------1.00--------------------
...........................................................................................................................................................................................................................................................................ATGAGACTGAAGATGTTAT...................191.000.00----------------------------------------------------------------------------------------------------------------------------------1.00---------
.........................................................................................................................................................................................................................................TCTTTCTGACTTTTTTCCCCACA.................................................231.000.001.00-------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................CTTTCTGACTTTTTTCCCCAT..................................................2111.002.00-----------------------------------------------1.00--------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................ATTTAGAAGATGAGACTGAAGA.........................2211.001.00----1.00---------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................GAAGATGATGACCTATTTGAAACTGA....2611.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................AGATGAGACTGAAGACATA.....................191.000.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................GAAGATGAGACTGAAGA.........................1730.330.33---------------------------------------------------------------------------------------0.33----------------------------------------------------
.................................................................................................................................................................................TGCATTTATCAAATCA................................................................................................................1660.170.17--------------------------------------------------0.17-----------------------------------------------------------------------------------------

Antisense strand
GTGTTGGACTGCTTTAGACAAAAATGAAGGCGAAATGATAACTTCTAAGGGTAAGTATGAAGTATGTGTTTTGATATGTTACTACTTTGACAGGATAATTGTTATACCTTTTATTTATTATTACTAATTTTGGGTGGAACAGATTTCTGTGATAGCATATAAGCATCAACTTGGATATGCATTTATCAAATCATTAGGTGGAAAAACAGGCTATTCATAATTGTCAGTCACTATCTTTCTGACTTTTTTCCCCAGATAATTTAGAAGATGAGACTGAAGATGATGACCTATTTGAAACTGAGTTT
..................................................................................................................................((((.((((..((..(((((....((((((...((......)).)))))).((((((.........))))))...)))))....))......(((((...........)))))...))))))))...................................................
...........................................................................................................108................................................................................................................................................255................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR040015(GSM532900)
G623T. (cervix)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553575(SRX182781)
source: Kidney. (Kidney)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR038858(GSM458541)
MEL202. (cell line)		SRR040007(GSM532892)
G601T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029130(GSM416759)
DLD2. (cell line)		SRR191423(GSM715533)
137genomic small RNA (size selected RNA from . (breast)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR040018(GSM532903)
G701N. (cervix)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR191536(GSM715646)
183genomic small RNA (size selected RNA from . (breast)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR040019(GSM532904)
G701T. (cervix)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029128(GSM416757)
H520. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR040025(GSM532910)
G613T. (cervix)		SRR040022(GSM532907)
G575N. (cervix)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR343335SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)		SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)		SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
........................................................................................................................................................................................................GAAAAACAGGCTATTGT........................................................................................ 172.000.00------------------------2.00-------------------------------------------------------------------------------------------------------------------
....................................................................TTTTGATATGTTACTTAC........................................................................................................................................................................................................................... 181.000.00--------------------------------------------------------------------------------------1.00-----------------------------------------------------
..................CAAAAATGAAGGCGAAATGCAAA........................................................................................................................................................................................................................................................................ 231.000.00-----------------------------------------------------------------------------------------------------------------1.00--------------------------
....................................................AACACATACTTCATACTT........................................................................................................................................................................................................................................... 1811.001.00-------------------------------------------------------------------------------------------------------------------------1.00------------------